Description

Ensembl ID BVRB_5g103580 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 7397 bases Strand Plus strand
Position 5 : 7925220 - 7932616 RNA binding domain Rsm22
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT12426 Rsm22 PF09243 3.9e-63 1
KMT12426 Rsm22 PF09243 3.9e-63 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT12426 2129 502aa KMT12426

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g103580beta_vulgarisKMT2011819.557210.3321beta_vulgarisKMT1242610.55785.57769

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g103580beta_vulgarisKMT1242658.764942.6295marchantia_polymorphaPTQ4221256.513440.9962
BVRB_5g103580beta_vulgarisKMT1242684.661470.9163theobroma_cacaoEOY2395380.798567.6806
BVRB_5g103580beta_vulgarisKMT1242684.462269.1235citrullus_lanatusCla97C01G001680.183.629268.4418
BVRB_5g103580beta_vulgarisKMT1242679.083761.9522ficus_caricaFCD_00035841-RA:cds79.241562.0758
BVRB_5g103580beta_vulgarisKMT1242656.175342.0319ficus_caricaFCD_00004740-RA:cds73.82255.2356
BVRB_5g103580beta_vulgarisKMT1242683.665368.3267prunus_dulcisVVA2757083.00467.7866
BVRB_5g103580beta_vulgarisKMT1242665.338651.5936oryza_longistaminataKN539560.1_FGP00867.628953.4021
BVRB_5g103580beta_vulgarisKMT1242678.884563.1474oryza_rufipogonORUFI07G10990.167.808254.2808
BVRB_5g103580beta_vulgarisKMT1242680.079764.9402lupinus_angustifoliusOIV9529444.46936.0619
BVRB_5g103580beta_vulgarisKMT1242684.063768.9243manihot_esculentaOAY5972183.399268.3794
BVRB_5g103580beta_vulgarisKMT1242680.478164.741medicago_truncatulaAET0245079.215763.7255
BVRB_5g103580beta_vulgarisKMT1242679.083762.749ananas_comosusAco013870.1.mrna176.640960.8108
BVRB_5g103580beta_vulgarisKMT1242682.470165.9363cucumis_meloMELO3C005771.2.181.496165.1575
BVRB_5g103580beta_vulgarisKMT1242670.916356.5737oryza_glaberrimaORGLA07G0092700.175.105559.9156
BVRB_5g103580beta_vulgarisKMT1242677.4963.3466oryza_brachyanthaOB10G23150.178.427464.1129
BVRB_5g103580beta_vulgarisKMT1242676.49462.5498triticum_urartuTuG1812G0300002876.01.T0174.418660.8527
BVRB_5g103580beta_vulgarisKMT1242681.872566.1355vigna_unguiculataVigun11g015800.1.v1.278.585163.4799
BVRB_5g103580beta_vulgarisKMT1242678.486163.9442glycine_maxKRH2064872.293658.8991
BVRB_5g103580beta_vulgarisKMT1242679.482163.3466vigna_radiataVradi0268s00070.169.633555.4974
BVRB_5g103580beta_vulgarisKMT1242668.924356.3745triticum_turgidumTRITD1Bv1G117170.567.184554.9515
BVRB_5g103580beta_vulgarisKMT1242676.49462.749triticum_turgidumTRITD1Av1G119670.474.418661.0465
BVRB_5g103580beta_vulgarisKMT1242683.665368.5259prunus_persicaONI0753683.168368.1188
BVRB_5g103580beta_vulgarisKMT1242631.872517.9283cyanidioschyzon_merolaeCME156CT36.951520.7852
BVRB_5g103580beta_vulgarisKMT1242632.270926.6932quercus_lobataQL10p010267:mrna79.411865.6863
BVRB_5g103580beta_vulgarisKMT1242682.470167.5299quercus_lobataQL10p008953:mrna81.33666.6012
BVRB_5g103580beta_vulgarisKMT1242663.346651.5936ipomoea_trilobaitb12g17810.t183.464667.979
BVRB_5g103580beta_vulgarisKMT1242677.888462.9482helianthus_annuusmRNA:HanXRQr2_Chr13g060364177.120362.3274
BVRB_5g103580beta_vulgarisKMT1242667.131553.1873cynara_cardunculusKVH9178777.829161.6628
BVRB_5g103580beta_vulgarisKMT1242683.067766.5339populus_trichocarpaPotri.001G086800.1.v4.182.574366.1386
BVRB_5g103580beta_vulgarisKMT1242671.912457.1713oryza_indicaBGIOSGA025471-PA75.52360.0418
BVRB_5g103580beta_vulgarisKMT1242636.653423.1076homo_sapiensENSP0000034304140.350925.4386
BVRB_5g103580beta_vulgarisKMT1242681.474167.5299pisum_sativumPsat4g194080.1.cds80.353666.6012
BVRB_5g103580beta_vulgarisKMT1242675.49858.5657brassica_junceacds.BjuB04g34550S68.411653.0686
BVRB_5g103580beta_vulgarisKMT1242633.665319.1235drosophila_melanogasterFBpp031030936.501120.7343
BVRB_5g103580beta_vulgarisKMT1242678.884563.5458setaria_viridisTKV9533676.447961.583
BVRB_5g103580beta_vulgarisKMT1242683.665367.9283malus_domestica_goldenmRNA:MD14G011600083.00467.3913
BVRB_5g103580beta_vulgarisKMT1242683.466168.1275malus_domestica_goldenmRNA:MD06G009120082.480367.3228
BVRB_5g103580beta_vulgarisKMT1242682.470167.5299quercus_subercds-POE77330.181.33666.6012
BVRB_5g103580beta_vulgarisKMT1242678.486162.3506oryza_nivaraONIVA08G19740.176.653760.8949
BVRB_5g103580beta_vulgarisKMT1242682.669369.1235citrus_clementinaESR5251381.054767.7734
BVRB_5g103580beta_vulgarisKMT1242678.685363.3466setaria_italicaKQK9026176.254861.39
BVRB_5g103580beta_vulgarisKMT1242676.892460.3586arabidopsis_hallerig27002.t171.880856.4246
BVRB_5g103580beta_vulgarisKMT1242677.091661.1554avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0000749.173.156958.034
BVRB_5g103580beta_vulgarisKMT1242677.290861.1554avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0000737.171.586756.6421
BVRB_5g103580beta_vulgarisKMT1242676.693260.757avena_sativa_ot3098cds.AVESA.00001b.r3.1Cg0001398.772.778857.656
BVRB_5g103580beta_vulgarisKMT1242678.087663.5458asparagus_officinalisONK8182678.087663.5458
BVRB_5g103580beta_vulgarisKMT1242682.868569.5219eucalyptus_grandisKCW7256282.376269.1089
BVRB_5g103580beta_vulgarisKMT1242658.964138.6454selaginella_moellendorffiiEFJ3070048.445231.7512
BVRB_5g103580beta_vulgarisKMT1242639.442226.494selaginella_moellendorffiiEFJ2874264.285743.1818
BVRB_5g103580beta_vulgarisKMT1242677.4960.9562fraxinus_excelsiorFRAEX38873_v2_000344400.1.cds77.4960.9562
BVRB_5g103580beta_vulgarisKMT1242676.892462.749aegilops_tauschiiAET1Gv20476400.170.825757.7982
BVRB_5g103580beta_vulgarisKMT1242679.482163.9442amborella_trichopodaERN1933070.996457.1174
BVRB_5g103580beta_vulgarisKMT1242678.286862.9482sorghum_bicolorEER9204875.868761.0039
BVRB_5g103580beta_vulgarisKMT1242684.063769.5219corchorus_capsularisOMO7986380.075966.2239
BVRB_5g103580beta_vulgarisKMT1242684.262976.494chenopodium_quinoaAUR62007027-RA:cds82.295774.7082
BVRB_5g103580beta_vulgarisKMT1242675.49867.3307chenopodium_quinoaAUR62019890-RA:cds86.529777.169
BVRB_5g103580beta_vulgarisKMT1242682.470169.3227juglans_regiacds.Jr02_15530_p180.544767.7043
BVRB_5g103580beta_vulgarisKMT1242675.099658.5657brassica_oleraceaBo9g032190.169.301554.0441
BVRB_5g103580beta_vulgarisKMT1242682.270969.3227coffea_canephoraCDP1220281.944469.0476
BVRB_5g103580beta_vulgarisKMT1242678.685363.5458digitaria_exilisDexi9A01G0031150.1:cds76.254861.583
BVRB_5g103580beta_vulgarisKMT1242678.685363.5458digitaria_exilisDexi9B01G0030020.1:cds75.095160.6464
BVRB_5g103580beta_vulgarisKMT1242682.270965.9363cannabis_sativa_femalecds.evm.model.05.208579.883964.0232
BVRB_5g103580beta_vulgarisKMT1242672.709257.5697eragrostis_curvulaTVU3197067.219253.2228
BVRB_5g103580beta_vulgarisKMT1242677.689260.1594eutrema_salsugineumESQ2888965.878451.0135
BVRB_5g103580beta_vulgarisKMT1242677.091660.9562avena_sativa_sangAVESA.00010b.r2.1DG0179860.1.CDS73.156957.845
BVRB_5g103580beta_vulgarisKMT1242676.693260.757avena_sativa_sangAVESA.00010b.r2.1CG0088250.1.CDS72.778857.656
BVRB_5g103580beta_vulgarisKMT1242677.091661.1554avena_sativa_sangAVESA.00010b.r2.1AG0061360.1.CDS73.156958.034
BVRB_5g103580beta_vulgarisKMT1242678.685365.1394trifolium_pratenseTp57577_TGAC_v2_mRNA882176.848363.6187
BVRB_5g103580beta_vulgarisKMT1242678.486162.1514oryza_barthiiOBART07G10890.176.653760.7004
BVRB_5g103580beta_vulgarisKMT1242681.075764.9402solanum_lycopersicumSolyc08g082880.3.172.419958.0071
BVRB_5g103580beta_vulgarisKMT1242676.892462.749hordeum_vulgareHORVU.MOREX.r3.1HG0050880.174.661560.9284
BVRB_5g103580beta_vulgarisKMT1242677.091661.9522vigna_angularisKOM3646277.710862.4498
BVRB_5g103580beta_vulgarisKMT1242684.262968.5259gossypium_raimondiiKJB5233582.617267.1875
BVRB_5g103580beta_vulgarisKMT1242678.286862.9482panicum_halliiPUZ4046575.722560.8863
BVRB_5g103580beta_vulgarisKMT1242683.466166.9323cajanus_cajanC.cajan_33699.t79.056663.3962
BVRB_5g103580beta_vulgarisKMT1242682.270968.1275rosa_chinensisPRQ5325180.664166.7969
BVRB_5g103580beta_vulgarisKMT124265041.0359rosa_chinensisPRQ1663886.851271.2803
BVRB_5g103580beta_vulgarisKMT1242639.840631.0757rosa_chinensisPRQ1664068.728553.6082
BVRB_5g103580beta_vulgarisKMT1242679.083763.5458musa_acuminataMa04_p33740.177.690862.4266
BVRB_5g103580beta_vulgarisKMT1242682.270969.9203corymbia_citriodoracds-KAF8028040.181.944469.6429
BVRB_5g103580beta_vulgarisKMT1242677.290861.5538eragrostis_tefEt_1B_011734.CDS69.53455.3763
BVRB_5g103580beta_vulgarisKMT1242677.689261.9522eragrostis_tefEt_1A_006923.CDS70.397156.1372
BVRB_5g103580beta_vulgarisKMT1242678.087662.9482oryza_punctataOPUNC07G09880.176.264661.4786
BVRB_5g103580beta_vulgarisKMT1242678.884566.1355daucus_carotaKZN0566279.838766.9355
BVRB_5g103580beta_vulgarisKMT1242674.50260.5578pistacia_veracds-EVM0027032.179.914564.9573
BVRB_5g103580beta_vulgarisKMT1242682.270967.5299pistacia_veracds-EVM0020680.180.980466.4706
BVRB_5g103580beta_vulgarisKMT1242678.486162.5498echinochloa_crusgalliscaffold45.171.cds76.208960.735
BVRB_5g103580beta_vulgarisKMT1242677.4961.9522echinochloa_crusgalliscaffold5.444.cds35.753728.5846
BVRB_5g103580beta_vulgarisKMT1242674.900459.761echinochloa_crusgalliscaffold7.36.cds71.077556.7108
BVRB_5g103580beta_vulgarisKMT1242635.458220.5179ciona_savignyiENSCSAVP0000001291443.734625.3071
BVRB_5g103580beta_vulgarisKMT1242676.892462.1514brachypodium_distachyonKQJ9749374.806260.4651
BVRB_5g103580beta_vulgarisKMT1242676.49459.5618arabidopsis_lyratafgenesh2_kg.2__16__AT1G64600.171.24355.4731
BVRB_5g103580beta_vulgarisKMT1242676.49462.749triticum_dicoccoidesTRIDC1AG027750.174.708261.284
BVRB_5g103580beta_vulgarisKMT1242623.904417.1315triticum_dicoccoidesTRIDC3BG077470.158.536641.9512
BVRB_5g103580beta_vulgarisKMT124265042.4303triticum_dicoccoidesTRIDC1BG033150.273.391862.2807
BVRB_5g103580beta_vulgarisKMT1242679.282963.5458oryza_sativaOs07t0297300-0070.818556.7616
BVRB_5g103580beta_vulgarisKMT1242681.075765.7371solanum_tuberosumPGSC0003DMT40003192980.594165.3465
BVRB_5g103580beta_vulgarisKMT1242676.095659.5618arabidopsis_thalianaAT1G64600.171.135955.6797
BVRB_5g103580beta_vulgarisKMT1242677.888462.749zea_maysZm00001eb021260_P00175.628660.9284
BVRB_5g103580beta_vulgarisKMT1242684.262971.5139actinidia_chinensisPSS1122484.262971.5139
BVRB_5g103580beta_vulgarisKMT1242678.486160.3586olea_europaeaOE9A014976C176.504958.835
BVRB_5g103580beta_vulgarisKMT1242679.880564.741lactuca_sativacds-PLY95603.178.627463.7255
BVRB_5g103580beta_vulgarisKMT1242676.693262.749triticum_aestivumTraesCS1A02G182900.270.383957.5868
BVRB_5g103580beta_vulgarisKMT1242676.892462.5498triticum_aestivumTraesCS1B02G197800.174.661560.735
BVRB_5g103580beta_vulgarisKMT1242676.693262.5498triticum_aestivumTraesCS1D02G186400.170.642257.6147
BVRB_5g103580beta_vulgarisKMT1242626.693221.7131nicotiana_attenuataOIS9961381.707366.4634
BVRB_5g103580beta_vulgarisKMT1242681.872564.9402phaseolus_vulgarisESW0567478.585162.3327
BVRB_5g103580beta_vulgarisKMT1242675.896458.9641arabis_alpinaKFK3295570.686554.9165
BVRB_5g103580beta_vulgarisKMT1242683.067767.1315cucumis_sativusKGN4999882.086666.3386
BVRB_5g103580beta_vulgarisKMT1242678.087663.745corylus_avellanaCav03g20560.t180.658465.8436
BVRB_5g103580beta_vulgarisKMT1242682.868567.3307capsicum_annuumPHT9217482.703867.1968
BVRB_5g103580beta_vulgarisKMT1242678.486162.3506oryza_glumipatulaOGLUM07G09920.176.653760.8949
BVRB_5g103580beta_vulgarisKMT1242673.107658.1673saccharum_spontaneumSspon.01G0013080-1A-mRNA-1:cds71.12456.5891
BVRB_5g103580beta_vulgarisKMT1242673.705258.5657saccharum_spontaneumSspon.01G0013080-1P-mRNA-1:cds74.898859.5142
BVRB_5g103580beta_vulgarisKMT1242675.49862.1514nymphaea_colorataNC9G0273500.1:cds65.570953.9792
BVRB_5g103580beta_vulgarisKMT1242685.25973.3068vitis_viniferaVitvi02g00194_P00173.162462.906
BVRB_5g103580beta_vulgarisKMT1242683.466167.7291prunus_aviumPav_sc0000652.1_g220.1.mk:mrna72.366158.7219
BVRB_5g103580beta_vulgarisKMT1242676.892459.5618camelina_sativaCsa07g066170.170.43854.562
BVRB_5g103580beta_vulgarisKMT1242657.968143.8247camelina_sativaCsa16g057340.164.096948.4581
BVRB_5g103580beta_vulgarisKMT1242676.892460.5578camelina_sativaCsa09g099450.169.549654.7748
BVRB_5g103580beta_vulgarisKMT1242678.087664.5418sesamum_indicumSIN_1021126.t75.529962.4277
BVRB_5g103580beta_vulgarisKMT1242649.800830.6773chara_brauniiGBG6785832.722520.1571
BVRB_5g103580beta_vulgarisKMT1242675.298858.9641kalanchoe_fedtschenkoiKaladp0067s0224.1.v1.176.363659.798
BVRB_5g103580beta_vulgarisKMT1242657.768945.2191dioscorea_rotundataDRNTG_35360.177.95761.0215
BVRB_5g103580beta_vulgarisKMT1242659.76148.2072dioscorea_rotundataDRNTG_35373.169.605656.1485
BVRB_5g103580beta_vulgarisKMT1242657.968140.4382physcomitrium_patensPAC:32913572.CDS.158.240.6
BVRB_5g103580beta_vulgarisKMT1242677.091662.749secale_cerealeSECCE1Rv1G0028520.174.854960.9284
BVRB_5g103580beta_vulgarisKMT1242677.888460.757papaver_somniferumRZC6245568.596553.5088
BVRB_5g103580beta_vulgarisKMT1242623.904419.7211papaver_somniferumRZC7089470.588258.2353

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression