Description

Ensembl ID BVRB_5g103000 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 21849 bases Strand Minus strand
Position 5 : 6948530 - 6970378 RNA binding domain IBN_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT12365 IBN_N PF03810 4.7e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT12365 4493 1003aa KMT12365

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g103000beta_vulgarisKMT0297732.571410.8571beta_vulgarisKMT123655.682951.89432
BVRB_5g103000beta_vulgarisKMT0699231.822913.2853beta_vulgarisKMT1236530.807612.8614
BVRB_5g103000beta_vulgarisKMT0297626.470610.9804beta_vulgarisKMT1236513.45965.58325
BVRB_5g103000beta_vulgarisKMT0839635.894916.2451beta_vulgarisKMT1236536.789616.65
BVRB_5g103000beta_vulgarisKMT1101733.236415.9884beta_vulgarisKMT1236534.197416.4506
BVRB_5g103000beta_vulgarisKMT1545726.12711.3155beta_vulgarisKMT1236528.315112.2632

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g103000beta_vulgarisKMT1236541.176521.4357chondrus_crispusCDF3744442.709422.2337
BVRB_5g103000beta_vulgarisKMT1236552.043931.8046chlamydomonas_reinhardtiiPNW8625444.125126.9653
BVRB_5g103000beta_vulgarisKMT1236570.687949.1525marchantia_polymorphaPTQ3752368.768247.8177
BVRB_5g103000beta_vulgarisKMT1236589.830576.9691theobroma_cacaoEOY071428572.8302
BVRB_5g103000beta_vulgarisKMT1236585.942272.0837citrullus_lanatusCla97C05G093420.185.262171.5134
BVRB_5g103000beta_vulgarisKMT1236512.462610.4686ficus_caricaFCD_00034986-RA:cds83.892670.4698
BVRB_5g103000beta_vulgarisKMT1236581.854469.7906ficus_caricaFCD_00029137-RA:cds87.901574.9465
BVRB_5g103000beta_vulgarisKMT1236589.531476.4706prunus_dulcisVVA2614288.910975.9406
BVRB_5g103000beta_vulgarisKMT1236567.896348.654oryza_longistaminataKN540905.1_FGP00366.503947.6562
BVRB_5g103000beta_vulgarisKMT1236569.391853.8385oryza_longistaminataKN538721.1_FGP01276.991159.7345
BVRB_5g103000beta_vulgarisKMT1236571.385851.5454oryza_rufipogonORUFI03G14250.170.681151.0365
BVRB_5g103000beta_vulgarisKMT1236576.570358.9232oryza_rufipogonORUFI07G28270.177.654259.7573
BVRB_5g103000beta_vulgarisKMT1236576.171564.4068lupinus_angustifoliusOIW0116881.276668.7234
BVRB_5g103000beta_vulgarisKMT1236590.029978.8634manihot_esculentaOAY4149589.317578.2394
BVRB_5g103000beta_vulgarisKMT1236587.936273.3799medicago_truncatulaAES7953087.586973.0884
BVRB_5g103000beta_vulgarisKMT1236577.966162.3131ananas_comosusAco001575.1.mrna180.535564.3666
BVRB_5g103000beta_vulgarisKMT1236570.189450.9472oryza_glaberrimaORGLA03G0130900.169.496550.4442
BVRB_5g103000beta_vulgarisKMT1236578.963160.8175oryza_glaberrimaORGLA07G0217200.177.799659.9214
BVRB_5g103000beta_vulgarisKMT1236578.66460.4187oryza_brachyanthaOB07G32820.177.504959.5285
BVRB_5g103000beta_vulgarisKMT1236579.461661.8146triticum_urartuTuG1812G0200000889.01.T0178.444961.0236
BVRB_5g103000beta_vulgarisKMT1236588.634174.5763vigna_unguiculataVigun05g098100.1.v1.288.10774.1328
BVRB_5g103000beta_vulgarisKMT1236588.534473.8784glycine_maxKRH4941587.487773.0049
BVRB_5g103000beta_vulgarisKMT1236588.634174.9751glycine_maxRCW1888188.10774.5292
BVRB_5g103000beta_vulgarisKMT1236583.050868.6939glycine_maxKRH0759980.795366.8283
BVRB_5g103000beta_vulgarisKMT1236571.086759.4217vigna_radiataVradi0221s00120.183.685469.953
BVRB_5g103000beta_vulgarisKMT1236575.772758.5244triticum_turgidumTRITD2Bv1G028250.953.483541.3089
BVRB_5g103000beta_vulgarisKMT1236579.561361.9143triticum_turgidumTRITD2Av1G021480.578.543361.122
BVRB_5g103000beta_vulgarisKMT1236557.926249.1525prunus_persicaONI2602886.587273.4724
BVRB_5g103000beta_vulgarisKMT1236533.898328.1157prunus_persicaONI2603188.082973.057
BVRB_5g103000beta_vulgarisKMT1236534.197417.7468cyanidioschyzon_merolaeCMA136CT34.964318.1448
BVRB_5g103000beta_vulgarisKMT1236588.933276.2712quercus_lobataQL07p034923:mrna88.404475.8176
BVRB_5g103000beta_vulgarisKMT1236586.241373.5793ipomoea_trilobaitb09g10230.t685.984173.3598
BVRB_5g103000beta_vulgarisKMT1236586.041972.682helianthus_annuusmRNA:HanXRQr2_Chr16g074137186.041972.682
BVRB_5g103000beta_vulgarisKMT1236580.65869.0927cynara_cardunculusKVI1142479.78368.3432
BVRB_5g103000beta_vulgarisKMT1236512.26329.17248cynara_cardunculusKVI0969142.560631.8339
BVRB_5g103000beta_vulgarisKMT1236587.936275.7727populus_trichocarpaPotri.016G119900.10.v4.187.240475.1731
BVRB_5g103000beta_vulgarisKMT1236571.286151.4457oryza_indicaBGIOSGA010939-PA70.582450.9378
BVRB_5g103000beta_vulgarisKMT1236578.963160.8175oryza_indicaBGIOSGA026445-PA77.799659.9214
BVRB_5g103000beta_vulgarisKMT1236578.963161.6152lolium_perennecds.KYUSt_chr2.294977.952860.8268
BVRB_5g103000beta_vulgarisKMT1236549.451627.6171homo_sapiensENSP0000031665150.871828.4103
BVRB_5g103000beta_vulgarisKMT1236588.933275.0748pisum_sativumPsat3g125960.1.cds88.404474.6283
BVRB_5g103000beta_vulgarisKMT1236520.937216.0518pisum_sativumPsat2g043480.1.cds18464.4
BVRB_5g103000beta_vulgarisKMT1236587.238373.8784brassica_junceacds.BjuA03g27250S84.869171.872
BVRB_5g103000beta_vulgarisKMT1236587.537474.3769brassica_junceacds.BjuA05g34390S86.930773.8614
BVRB_5g103000beta_vulgarisKMT1236587.437773.4796brassica_junceacds.BjuB07g19900S87.350673.4064
BVRB_5g103000beta_vulgarisKMT1236545.363924.9252drosophila_melanogasterFBpp008641642.325623.2558
BVRB_5g103000beta_vulgarisKMT1236543.170521.4357saccharomyces_cerevisiaeYPL125W41.957420.8333
BVRB_5g103000beta_vulgarisKMT1236573.379956.7298leersia_perrieriLPERR07G24070.172.298655.8939
BVRB_5g103000beta_vulgarisKMT1236579.561360.4187setaria_viridisTKW3667078.312159.4701
BVRB_5g103000beta_vulgarisKMT1236588.534475.0748malus_domestica_goldenmRNA:MD04G000000087.920874.5545
BVRB_5g103000beta_vulgarisKMT1236588.634176.4706quercus_subercds-POF18953.188.10776.0159
BVRB_5g103000beta_vulgarisKMT1236576.6759.0229oryza_nivaraONIVA07G27080.177.755359.8584
BVRB_5g103000beta_vulgarisKMT1236571.286151.4457oryza_nivaraONIVA03G14850.170.582450.9378
BVRB_5g103000beta_vulgarisKMT1236590.229376.4706citrus_clementinaESR4267689.515375.8655
BVRB_5g103000beta_vulgarisKMT1236579.361960.319setaria_italicaKQL2729478.115859.3719
BVRB_5g103000beta_vulgarisKMT1236587.238374.676arabidopsis_hallerig11700.t186.633774.1584
BVRB_5g103000beta_vulgarisKMT1236579.860461.6152avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0000364.175.070357.9194
BVRB_5g103000beta_vulgarisKMT1236579.860461.7149avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0002848.175.070358.0131
BVRB_5g103000beta_vulgarisKMT1236579.66161.5155avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0002942.1374.533657.556
BVRB_5g103000beta_vulgarisKMT1236581.455664.6062asparagus_officinalisONK6790781.618464.7353
BVRB_5g103000beta_vulgarisKMT1236587.736874.1775eucalyptus_grandisKCW8815487.562274.0299
BVRB_5g103000beta_vulgarisKMT1236565.304144.1675selaginella_moellendorffiiEFJ0798065.631344.3888
BVRB_5g103000beta_vulgarisKMT1236561.316141.675selaginella_moellendorffiiEFJ1602764.263343.6782
BVRB_5g103000beta_vulgarisKMT1236587.33873.2802fraxinus_excelsiorFRAEX38873_v2_000232610.3.cds87.512573.4266
BVRB_5g103000beta_vulgarisKMT1236584.247371.3858fraxinus_excelsiorFRAEX38873_v2_000267680.1.cds87.023773.7384
BVRB_5g103000beta_vulgarisKMT1236579.361961.5155aegilops_tauschiiAET2Gv20164400.577.962860.431
BVRB_5g103000beta_vulgarisKMT1236576.6759.0229oryza_meridionalisOMERI07G23830.177.755359.8584
BVRB_5g103000beta_vulgarisKMT1236571.684951.4457oryza_meridionalisOMERI02G33660.170.977350.9378
BVRB_5g103000beta_vulgarisKMT1236580.957164.6062amborella_trichopodaERN0532579.842763.7168
BVRB_5g103000beta_vulgarisKMT1236578.763761.1166sorghum_bicolorKXG3703177.52760.157
BVRB_5g103000beta_vulgarisKMT1236589.33276.7697corchorus_capsularisOMO8498988.712976.2376
BVRB_5g103000beta_vulgarisKMT1236587.637175.0748juglans_regiacds.Jr03_25960_p186.686474.2604
BVRB_5g103000beta_vulgarisKMT1236587.637175.0748juglans_regiacds.Jr03_25970_p187.11674.6283
BVRB_5g103000beta_vulgarisKMT1236587.437774.3769brassica_oleraceaBo5g139620.186.831773.8614
BVRB_5g103000beta_vulgarisKMT1236587.33874.3769brassica_oleraceaBo3g062290.186.646973.7883
BVRB_5g103000beta_vulgarisKMT1236587.736873.8784coffea_canephoraCDP0645887.649473.8048
BVRB_5g103000beta_vulgarisKMT1236560.418745.8624digitaria_exilisDexi2B01G0036450.1:cds75.46757.2852
BVRB_5g103000beta_vulgarisKMT1236560.518445.9621digitaria_exilisDexi2A01G0037430.1:cds75.591557.4097
BVRB_5g103000beta_vulgarisKMT123657.178466.38086cannabis_sativa_femalecds.novel_model_637_5bd9a17a85.714376.1905
BVRB_5g103000beta_vulgarisKMT1236577.66759.6211eragrostis_curvulaTVU3709973.214356.203
BVRB_5g103000beta_vulgarisKMT1236579.461660.7178eragrostis_curvulaTVT9779873.591956.2327
BVRB_5g103000beta_vulgarisKMT1236587.936274.7757eutrema_salsugineumESQ4917887.326774.2574
BVRB_5g103000beta_vulgarisKMT1236579.860461.7149avena_sativa_sangAVESA.00010b.r2.6AG1064200.1.CDS78.838660.9252
BVRB_5g103000beta_vulgarisKMT1236579.860461.6152avena_sativa_sangAVESA.00010b.r2.4CG1260190.1.CDS78.838660.8268
BVRB_5g103000beta_vulgarisKMT1236579.760761.6152avena_sativa_sangAVESA.00010b.r2.5DG0945250.1.CDS78.740260.8268
BVRB_5g103000beta_vulgarisKMT1236587.936274.5763trifolium_pratenseTp57577_TGAC_v2_mRNA3664587.413374.1328
BVRB_5g103000beta_vulgarisKMT1236571.186451.4457oryza_barthiiOBART03G13590.170.483750.9378
BVRB_5g103000beta_vulgarisKMT1236586.640172.4826solanum_lycopersicumSolyc09g005130.3.186.467772.3383
BVRB_5g103000beta_vulgarisKMT1236579.062861.2164hordeum_vulgareHORVU.MOREX.r3.2HG0108280.178.051260.4331
BVRB_5g103000beta_vulgarisKMT1236588.434774.1775gossypium_raimondiiKJB1704587.821873.6634
BVRB_5g103000beta_vulgarisKMT1236589.531475.7727gossypium_raimondiiKJB7701188.822975.1731
BVRB_5g103000beta_vulgarisKMT1236578.763760.0199panicum_halliiPUZ7357777.52759.0775
BVRB_5g103000beta_vulgarisKMT1236587.238374.0778cajanus_cajanC.cajan_31099.t81.547169.2451
BVRB_5g103000beta_vulgarisKMT1236587.238373.8784brassica_rapa_ro18A03p038350.1_BraROA.186.54873.2938
BVRB_5g103000beta_vulgarisKMT1236587.537474.2772brassica_rapa_ro18A05p050160.1_BraROA.186.930773.7624
BVRB_5g103000beta_vulgarisKMT1236582.951165.9023musa_acuminataMa10_p23060.381.648764.8675
BVRB_5g103000beta_vulgarisKMT1236588.035974.3769corymbia_citriodoracds-KAF8012940.187.860774.2289
BVRB_5g103000beta_vulgarisKMT1236578.66460.1196eragrostis_tefEt_5A_041235.CDS77.887559.5262
BVRB_5g103000beta_vulgarisKMT1236577.268259.5214eragrostis_tefEt_5B_043394.CDS77.733259.8796
BVRB_5g103000beta_vulgarisKMT1236578.564360.319oryza_punctataOPUNC07G25680.178.019859.901
BVRB_5g103000beta_vulgarisKMT1236566.699948.4546oryza_punctataOPUNC03G13100.170.868651.4831
BVRB_5g103000beta_vulgarisKMT1236586.241371.4855daucus_carotaKZM9724886.241371.4855
BVRB_5g103000beta_vulgarisKMT1236586.241372.0837daucus_carotaKZM9544183.413769.7203
BVRB_5g103000beta_vulgarisKMT1236590.029977.0688pistacia_veracds-EVM0026535.289.317576.459
BVRB_5g103000beta_vulgarisKMT1236579.262260.7178echinochloa_crusgalliscaffold1.1827.cds56.543443.3144
BVRB_5g103000beta_vulgarisKMT1236579.361960.8175echinochloa_crusgalliscaffold2.19.cds78.115859.8626
BVRB_5g103000beta_vulgarisKMT1236543.469623.33ciona_savignyiENSCSAVP0000000613245.55924.4514
BVRB_5g103000beta_vulgarisKMT1236579.162562.014brachypodium_distachyonKQK1449278.149661.2205
BVRB_5g103000beta_vulgarisKMT1236587.238374.2772arabidopsis_lyratafgenesh1_pm.C_scaffold_300071686.633773.7624
BVRB_5g103000beta_vulgarisKMT1236579.561361.8146triticum_dicoccoidesTRIDC2BG011810.1878.543361.0236
BVRB_5g103000beta_vulgarisKMT1236576.470659.322triticum_dicoccoidesTRIDC2AG009910.378.586160.9631
BVRB_5g103000beta_vulgarisKMT1236554.835542.1735oryza_sativaOs07t0693400-0078.014260
BVRB_5g103000beta_vulgarisKMT1236522.632116.3509oryza_sativaOs03t0292900-0172.063552.0635
BVRB_5g103000beta_vulgarisKMT1236539.182517.5474galdieria_sulphurariaEME2669540.307718.0513
BVRB_5g103000beta_vulgarisKMT1236526.719822.2333solanum_tuberosumPGSC0003DMT40001600287.296472.6384
BVRB_5g103000beta_vulgarisKMT1236586.839574.4766arabidopsis_thalianaAT3G08960.286.237673.9604
BVRB_5g103000beta_vulgarisKMT1236578.564360.1196zea_maysZm00001eb111960_P00577.406759.2338
BVRB_5g103000beta_vulgarisKMT1236588.035975.0748actinidia_chinensisPSS3469881.608169.5933
BVRB_5g103000beta_vulgarisKMT1236588.833575.8724actinidia_chinensisPSS3269888.656775.7214
BVRB_5g103000beta_vulgarisKMT1236586.839572.9811olea_europaeaOE9A037316C187.01373.1269
BVRB_5g103000beta_vulgarisKMT1236587.038973.0808olea_europaeaOE9A117100C187.212873.2268
BVRB_5g103000beta_vulgarisKMT123659.272186.97906olea_europaeaOE9A019109C142.857132.2581
BVRB_5g103000beta_vulgarisKMT1236587.038973.5793lactuca_sativacds-PLY88217.186.952273.506
BVRB_5g103000beta_vulgarisKMT1236579.561361.9143triticum_aestivumTraesCS2A02G088000.178.543361.122
BVRB_5g103000beta_vulgarisKMT1236579.561361.8146triticum_aestivumTraesCS2B02G102500.178.543361.0236
BVRB_5g103000beta_vulgarisKMT1236579.461661.6152triticum_aestivumTraesCS2D02G085100.178.444960.8268
BVRB_5g103000beta_vulgarisKMT1236588.534474.7757phaseolus_vulgarisESW1223588.007974.331
BVRB_5g103000beta_vulgarisKMT1236587.437773.9781brassica_napusCDX7395086.745873.3927
BVRB_5g103000beta_vulgarisKMT1236587.437774.3769brassica_napusCDY5308786.831773.8614
BVRB_5g103000beta_vulgarisKMT1236587.437774.3769brassica_napusCDY0789686.745873.7883
BVRB_5g103000beta_vulgarisKMT1236587.637174.676brassica_napusCDY4467087.029774.1584
BVRB_5g103000beta_vulgarisKMT1236532.801626.7198cucumis_sativusKGN5780976.869262.6168
BVRB_5g103000beta_vulgarisKMT1236534.99528.8136cucumis_sativusKGN5780682.978768.3215
BVRB_5g103000beta_vulgarisKMT1236584.147673.1805corylus_avellanaCav09g16270.t186.65375.3593
BVRB_5g103000beta_vulgarisKMT123658.075776.87936capsicum_annuumPHT672989076.6667
BVRB_5g103000beta_vulgarisKMT1236571.286151.4457oryza_glumipatulaOGLUM03G13690.168.882549.711
BVRB_5g103000beta_vulgarisKMT1236576.570359.1226oryza_glumipatulaOGLUM07G27310.171.842855.4724
BVRB_5g103000beta_vulgarisKMT1236576.370958.0259nymphaea_colorataNC1G0108180.1:cds73.795856.0694
BVRB_5g103000beta_vulgarisKMT1236589.33278.7637vitis_viniferaVitvi08g00687_P00188.625178.1405
BVRB_5g103000beta_vulgarisKMT1236516.350914.3569prunus_aviumPav_sc0000551.1_g020.1.mk:mrna92.655481.3559
BVRB_5g103000beta_vulgarisKMT1236587.238374.7757camelina_sativaCsa01g009670.186.633774.2574
BVRB_5g103000beta_vulgarisKMT1236587.238374.2772camelina_sativaCsa19g012350.181.928869.7566
BVRB_5g103000beta_vulgarisKMT1236587.437774.676camelina_sativaCsa15g010270.185.311372.8599
BVRB_5g103000beta_vulgarisKMT1236584.047969.99sesamum_indicumSIN_1011062.t87.357572.7461
BVRB_5g103000beta_vulgarisKMT1236516.949212.1635chara_brauniiGBG8710178.703756.4815
BVRB_5g103000beta_vulgarisKMT1236587.437773.7787kalanchoe_fedtschenkoiKaladp0024s0406.1.v1.186.831773.2673
BVRB_5g103000beta_vulgarisKMT1236565.603253.2403dioscorea_rotundataDRNTG_16885.181.134465.8446
BVRB_5g103000beta_vulgarisKMT1236569.790648.8534physcomitrium_patensPp3c14_210V3.369.033548.3235
BVRB_5g103000beta_vulgarisKMT1236569.292148.4546physcomitrium_patensPp3c2_22550V3.268.608147.9763
BVRB_5g103000beta_vulgarisKMT1236579.561361.7149secale_cerealeSECCE2Rv1G0069790.178.543360.9252

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression