Description

Ensembl ID BVRB_4g096180 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 5197 bases Strand Minus strand
Position Bvchr4_un.sca020 : 537579 - 542775 RNA binding domain Piwi , PAZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMS98061 Piwi PF02171 9.2e-90 1
KMS98061 PAZ PF02170 4.3e-27 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMS98061 2976 897aa KMS98061

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g096180beta_vulgarisKMT0370852.838441.048beta_vulgarisKMS9806113.489410.4794
BVRB_4g096180beta_vulgarisKMT0297348.235330.9091beta_vulgarisKMS9806150.278732.2185
BVRB_4g096180beta_vulgarisKMT0370936.0721.8035beta_vulgarisKMS9806129.877418.0602
BVRB_4g096180beta_vulgarisKMT0179146.13830.69beta_vulgarisKMS9806149.944333.2219
BVRB_4g096180beta_vulgarisKMT0179040.922527.2816beta_vulgarisKMS9806146.488330.9922
BVRB_4g096180beta_vulgarisKMS9822236.237323.355beta_vulgarisKMS9806143.589728.0936
BVRB_4g096180beta_vulgarisKMT0699539.690225.0726beta_vulgarisKMS9806145.707928.874
BVRB_4g096180beta_vulgarisKMT0218682.197867.5824beta_vulgarisKMS9806183.389168.5619
BVRB_4g096180beta_vulgarisKMT1493777.941261.7647beta_vulgarisKMS9806176.811660.8696
BVRB_4g096180beta_vulgarisKMT0248267.337850.1119beta_vulgarisKMS9806167.112649.9443

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g096180beta_vulgarisKMS9806179.264263.5452prunus_dulcisVVA2800378.824863.1929
BVRB_4g096180beta_vulgarisKMS9806181.382467.3356prunus_dulcisVVA2800480.131766.3008
BVRB_4g096180beta_vulgarisKMS9806178.818366.4437lupinus_angustifoliusOIV9552878.20865.9292
BVRB_4g096180beta_vulgarisKMS9806171.014556.5217medicago_truncatulaAES6860472.716957.8767
BVRB_4g096180beta_vulgarisKMS9806161.984450.3902glycine_maxKRH5627666.907354.3923
BVRB_4g096180beta_vulgarisKMS980618.807135.23969glycine_maxKRH7206869.298241.2281
BVRB_4g096180beta_vulgarisKMS9806181.382467.3356prunus_persicaONI2126680.131766.3008
BVRB_4g096180beta_vulgarisKMS9806176.031260.7581prunus_persicaONI2126578.21162.5
BVRB_4g096180beta_vulgarisKMS9806171.571958.8629quercus_lobataQL93p1871_0004:mrna75.796962.3377
BVRB_4g096180beta_vulgarisKMS9806178.149464.2141quercus_lobataQL04p051677:mrna76.61262.9508
BVRB_4g096180beta_vulgarisKMS9806179.821667.0011ipomoea_trilobaitb15g09160.t180.812667.833
BVRB_4g096180beta_vulgarisKMS9806115.719112.2631helianthus_annuusmRNA:HanXRQr2_Chr12g052978164.383650.2283
BVRB_4g096180beta_vulgarisKMS9806177.814964.7715cynara_cardunculusKVI0848377.212464.2699
BVRB_4g096180beta_vulgarisKMS9806182.831769.6767populus_trichocarpaPotri.008G010500.2.v4.181.380168.4556
BVRB_4g096180beta_vulgarisKMS9806135.897421.1817caenorhabditis_elegansC18E3.7c.136.302121.4205
BVRB_4g096180beta_vulgarisKMS9806135.78621.0702caenorhabditis_elegansF56A6.1a.136.189421.3078
BVRB_4g096180beta_vulgarisKMS9806135.451519.621caenorhabditis_elegansF58G1.1.132.953418.2383
BVRB_4g096180beta_vulgarisKMS9806136.008919.398caenorhabditis_elegansY110A7A.18.133.128217.8462
BVRB_4g096180beta_vulgarisKMS9806138.57321.0702caenorhabditis_elegansT22H9.3.134.949519.0909
BVRB_4g096180beta_vulgarisKMS9806138.461521.1817caenorhabditis_elegansC16C10.3.133.430218.4109
BVRB_4g096180beta_vulgarisKMS9806142.809425.4181caenorhabditis_elegansT22B3.2b.137.101422.029
BVRB_4g096180beta_vulgarisKMS9806142.809425.5295caenorhabditis_elegansZK757.3a.136.923122.0192
BVRB_4g096180beta_vulgarisKMS9806134.894117.5028caenorhabditis_elegansZK1248.7.134.320217.2149
BVRB_4g096180beta_vulgarisKMS9806135.78619.398caenorhabditis_elegansR06C7.1.133.968318.4127
BVRB_4g096180beta_vulgarisKMS9806116.610912.2631brassica_junceacds.BjuA03g54500S61.825745.6432
BVRB_4g096180beta_vulgarisKMS9806180.936567.447malus_domestica_goldenmRNA:MD07G004150079.692666.4105
BVRB_4g096180beta_vulgarisKMS9806175.919760.6466malus_domestica_goldenmRNA:MD07G004170070.716556.4901
BVRB_4g096180beta_vulgarisKMS9806178.149464.3255quercus_subercds-POE76974.176.61263.0601
BVRB_4g096180beta_vulgarisKMS9806163.210751.728citrus_clementinaESR4576978.423264.177
BVRB_4g096180beta_vulgarisKMS9806129.654425.4181fraxinus_excelsiorFRAEX38873_v2_000113770.1.cds79.640768.2635
BVRB_4g096180beta_vulgarisKMS9806111.92879.699fraxinus_excelsiorFRAEX38873_v2_000254180.1.cds76.978462.5899
BVRB_4g096180beta_vulgarisKMS9806140.579732.8874fraxinus_excelsiorFRAEX38873_v2_000113780.1.cds78.617763.7149
BVRB_4g096180beta_vulgarisKMS9806120.624315.2731amborella_trichopodaERM9537461.056145.2145
BVRB_4g096180beta_vulgarisKMS9806127.313319.2865coffea_canephoraCDP1509160.196642.5061
BVRB_4g096180beta_vulgarisKMS9806118.506115.6076trifolium_pratenseTp57577_TGAC_v2_mRNA2559457.439448.4429
BVRB_4g096180beta_vulgarisKMS9806179.821665.7748solanum_lycopersicumSolyc01g096750.1.181.271366.9694
BVRB_4g096180beta_vulgarisKMS9806172.463858.6399cajanus_cajanC.cajan_14693.t73.446359.435
BVRB_4g096180beta_vulgarisKMS9806118.171713.2664brassica_rapa_ro18A03g500560.1_BraROA.149.096435.8434
BVRB_4g096180beta_vulgarisKMS980618.472695.57414rosa_chinensisPRQ5460854.676335.9712
BVRB_4g096180beta_vulgarisKMS9806111.03688.24972pistacia_veracds-EVM0004191.168.275951.0345
BVRB_4g096180beta_vulgarisKMS9806178.149464.3255pistacia_veracds-EVM0003125.177.373163.6865
BVRB_4g096180beta_vulgarisKMS9806112.374610.1449pistacia_veracds-EVM0009338.164.912353.2164
BVRB_4g096180beta_vulgarisKMS9806126.421422.0736solanum_tuberosumPGSC0003DMT40007080681.164467.8082
BVRB_4g096180beta_vulgarisKMS9806135.897427.5362olea_europaeaOE9A044602C170.305753.9301
BVRB_4g096180beta_vulgarisKMS9806178.483864.437olea_europaeaOE9A062281C177.790163.8674
BVRB_4g096180beta_vulgarisKMS9806119.732416.4994olea_europaeaOE9A103712C180.090566.9683
BVRB_4g096180beta_vulgarisKMS980617.023414.79376lactuca_sativacds-PLY80839.136.842125.1462
BVRB_4g096180beta_vulgarisKMS9806177.926464.3255capsicum_annuumPHT7484576.982463.5463
BVRB_4g096180beta_vulgarisKMS9806175.585360.5351vitis_viniferaVitvi04g04256_P00176.610261.3559
BVRB_4g096180beta_vulgarisKMS9806131.661126.7559prunus_aviumPav_sc0000593.1_g020.1.mk:mrna78.670466.482
BVRB_4g096180beta_vulgarisKMS9806164.548551.505prunus_aviumPav_sc0000593.1_g010.1.mk:mrna76.284660.8696
BVRB_4g096180beta_vulgarisKMS9806136.566329.4314prunus_aviumPav_sc0009301.1_g030.1.mk:mrna75.750660.97
BVRB_4g096180beta_vulgarisKMS9806162.541852.5084prunus_aviumPav_sc0001836.1_g010.1.mk:mrna84.615471.0407
BVRB_4g096180beta_vulgarisKMS9806122.742518.2832prunus_aviumPav_co4034019.1_g010.1.mk:mrna80.632464.8221
BVRB_4g096180beta_vulgarisKMS9806179.041367.0011sesamum_indicumSIN_1017719.t79.662967.5281
BVRB_4g096180beta_vulgarisKMS980619.253077.46934dioscorea_rotundataDRNTG_03074.176.851962.037

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression