Description

Ensembl ID BVRB_4g094660 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 6726 bases Strand Plus strand
Position Bvchr4_un.sca014 : 317360 - 324085 RNA binding domain Ribosomal_L28
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMS98202 Ribosomal_L28 PF00830 2.5e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMS98202 1642 202aa KMS98202

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g094660beta_vulgarisKMT1656937.01318.8312beta_vulgarisKMS9820228.217814.3564
BVRB_4g094660beta_vulgarisKMT1819891.86686.6029beta_vulgarisKMS9820295.049589.604

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g094660beta_vulgarisKMS9820242.079229.2079chondrus_crispusCDF4046553.459137.1069
BVRB_4g094660beta_vulgarisKMS9820248.514935.1485marchantia_polymorphaPTQ4309865.333347.3333
BVRB_4g094660beta_vulgarisKMS9820281.188168.3168theobroma_cacaoEOY2922063.565953.4884
BVRB_4g094660beta_vulgarisKMS9820284.158471.7822citrullus_lanatusCla97C10G185610.177.272765.9091
BVRB_4g094660beta_vulgarisKMS9820280.19867.3267ficus_caricaFCD_00030489-RA:cds74.654462.6728
BVRB_4g094660beta_vulgarisKMS9820279.207960.8911prunus_dulcisVVA1494568.085152.3404
BVRB_4g094660beta_vulgarisKMS9820270.29757.9208oryza_longistaminataKN540146.1_FGP01069.607857.3529
BVRB_4g094660beta_vulgarisKMS9820270.29757.9208oryza_rufipogonORUFI07G18420.169.607857.3529
BVRB_4g094660beta_vulgarisKMS9820278.712967.8218lupinus_angustifoliusOIV9515169.736860.0877
BVRB_4g094660beta_vulgarisKMS9820284.653571.7822manihot_esculentaOAY2534581.042768.7204
BVRB_4g094660beta_vulgarisKMS9820270.792152.9703manihot_esculentaOAY2934467.772550.7109
BVRB_4g094660beta_vulgarisKMS9820280.693164.8515medicago_truncatulaAES5871170.258656.4655
BVRB_4g094660beta_vulgarisKMS9820277.722864.3564ananas_comosusAco027694.1.mrna158.582148.5075
BVRB_4g094660beta_vulgarisKMS9820283.663470.297cucumis_meloMELO3C013792.2.176.126163.964
BVRB_4g094660beta_vulgarisKMS9820263.366353.4653oryza_glaberrimaORGLA07G0142100.160.663551.1848
BVRB_4g094660beta_vulgarisKMS9820272.277257.4257oryza_brachyanthaOB07G23590.171.568656.8627
BVRB_4g094660beta_vulgarisKMS9820271.287158.9109triticum_urartuTuG1812G0200002466.01.T0155.384645.7692
BVRB_4g094660beta_vulgarisKMS9820271.287158.9109triticum_urartuTuG1812G0200002460.01.T0155.384645.7692
BVRB_4g094660beta_vulgarisKMS9820277.227766.8317vigna_unguiculataVigun11g147300.1.v1.276.097665.8537
BVRB_4g094660beta_vulgarisKMS9820281.188165.8416glycine_maxKRH2492669.787256.5957
BVRB_4g094660beta_vulgarisKMS9820255.940648.0198vigna_radiataVradi02g05600.173.376662.987
BVRB_4g094660beta_vulgarisKMS9820271.287158.9109triticum_turgidumTRITD2Av1G083940.246.601938.5113
BVRB_4g094660beta_vulgarisKMS9820278.712960.396prunus_persicaONI3403267.659651.9149
BVRB_4g094660beta_vulgarisKMS9820233.168324.2574cyanidioschyzon_merolaeCMJ238CT57.758642.2414
BVRB_4g094660beta_vulgarisKMS9820282.178270.297quercus_lobataQL12p025158:mrna79.425867.9426
BVRB_4g094660beta_vulgarisKMS9820277.227762.8713ipomoea_trilobaitb02g24640.t170.270357.2072
BVRB_4g094660beta_vulgarisKMS9820277.227763.3663helianthus_annuusmRNA:HanXRQr2_Chr11g050057175.728262.1359
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614helianthus_annuusmRNA:HanXRQr2_Chr01g004272175.728262.6214
BVRB_4g094660beta_vulgarisKMS9820279.70365.8416cynara_cardunculusKVH9987478.155364.5631
BVRB_4g094660beta_vulgarisKMS9820281.188164.8515populus_trichocarpaPotri.018G006900.1.v4.171.615757.2052
BVRB_4g094660beta_vulgarisKMS9820270.29757.9208oryza_indicaBGIOSGA024143-PA69.607857.3529
BVRB_4g094660beta_vulgarisKMS9820265.841651.9802lolium_perennecds.KYUSt_chr2.1839265.196151.4706
BVRB_4g094660beta_vulgarisKMS9820238.613921.7822homo_sapiensENSP0000019970630.468817.1875
BVRB_4g094660beta_vulgarisKMS9820280.19867.3267pisum_sativumPsat6g036480.1.cds68.936257.8723
BVRB_4g094660beta_vulgarisKMS9820239.60420.297caenorhabditis_elegansT25D3.2.125.806513.2258
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614brassica_junceacds.BjuA01g38180S73.584960.8491
BVRB_4g094660beta_vulgarisKMS9820277.722864.3564brassica_junceacds.BjuA08g15630S73.023360.4651
BVRB_4g094660beta_vulgarisKMS9820238.613918.3168drosophila_melanogasterFBpp030366925.827812.2517
BVRB_4g094660beta_vulgarisKMS9820243.564427.2277saccharomyces_cerevisiaeYMR193W34.108521.3178
BVRB_4g094660beta_vulgarisKMS9820271.782258.4158leersia_perrieriLPERR07G15170.170.048357.0048
BVRB_4g094660beta_vulgarisKMS9820272.277257.4257setaria_viridisTKW3515370.531456.0386
BVRB_4g094660beta_vulgarisKMS9820278.712961.3861malus_domestica_goldenmRNA:MD15G009280066.806752.1008
BVRB_4g094660beta_vulgarisKMS9820279.70361.8812malus_domestica_goldenmRNA:MD08G010940067.647152.521
BVRB_4g094660beta_vulgarisKMS9820282.178270.297quercus_subercds-POE66762.179.425867.9426
BVRB_4g094660beta_vulgarisKMS9820282.673368.3168quercus_subercds-POE82537.179.904366.0287
BVRB_4g094660beta_vulgarisKMS9820274.257459.901oryza_nivaraONIVA07G16030.165.502252.8384
BVRB_4g094660beta_vulgarisKMS9820282.673366.8317citrus_clementinaESR6342175.225260.8108
BVRB_4g094660beta_vulgarisKMS9820272.277257.4257setaria_italicaKQL2613370.531456.0386
BVRB_4g094660beta_vulgarisKMS9820276.237664.3564arabidopsis_hallerig00851.t172.641561.3208
BVRB_4g094660beta_vulgarisKMS9820266.831752.4752avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0000629.157.203444.9153
BVRB_4g094660beta_vulgarisKMS9820266.336651.9802avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0002603.155.14443.2099
BVRB_4g094660beta_vulgarisKMS9820272.277257.4257asparagus_officinalisONK7472670.531456.0386
BVRB_4g094660beta_vulgarisKMS9820254.455443.0693asparagus_officinalisONK6562866.666752.7273
BVRB_4g094660beta_vulgarisKMS9820286.633771.2871eucalyptus_grandisKCW5925477.777864
BVRB_4g094660beta_vulgarisKMS9820245.544636.6337selaginella_moellendorffiiEFJ2956881.415965.4867
BVRB_4g094660beta_vulgarisKMS9820245.544636.6337selaginella_moellendorffiiEFJ3878581.415965.4867
BVRB_4g094660beta_vulgarisKMS9820285.643670.7921fraxinus_excelsiorFRAEX38873_v2_000038160.1.cds79.723565.8986
BVRB_4g094660beta_vulgarisKMS9820284.158470.297fraxinus_excelsiorFRAEX38873_v2_000116780.1.cds78.34165.4378
BVRB_4g094660beta_vulgarisKMS9820271.287158.4158aegilops_tauschiiAET2Gv20457500.253.932644.1948
BVRB_4g094660beta_vulgarisKMS9820270.792157.9208oryza_meridionalisOMERI07G14610.170.09857.3529
BVRB_4g094660beta_vulgarisKMS9820279.207963.8614amborella_trichopodaERN0728471.748957.8475
BVRB_4g094660beta_vulgarisKMS9820272.277256.9307sorghum_bicolorEER9949669.523854.7619
BVRB_4g094660beta_vulgarisKMS9820279.207968.8119corchorus_capsularisOMO8612186.956575.5435
BVRB_4g094660beta_vulgarisKMS9820278.217866.8317chenopodium_quinoaAUR62027460-RA:cds62.698453.5714
BVRB_4g094660beta_vulgarisKMS9820284.653575.2475juglans_regiacds.Jr08_02730_p177.375668.7783
BVRB_4g094660beta_vulgarisKMS9820276.732763.3663brassica_oleraceaBo3g173930.172.09359.5349
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614brassica_oleraceaBo1g011290.173.584960.8491
BVRB_4g094660beta_vulgarisKMS9820287.128770.7921coffea_canephoraCDP1848579.63864.7059
BVRB_4g094660beta_vulgarisKMS9820271.782257.4257digitaria_exilisDexi9A01G0031980.1:cds70.048356.0386
BVRB_4g094660beta_vulgarisKMS9820275.742665.8416cannabis_sativa_femalecds.evm.model.01.282572.511863.0332
BVRB_4g094660beta_vulgarisKMS9820277.722867.3267cannabis_sativa_femalecds.novel_model_6669_5bd9a17a73.364563.5514
BVRB_4g094660beta_vulgarisKMS9820271.782258.9109eragrostis_curvulaTVU3869469.711557.2115
BVRB_4g094660beta_vulgarisKMS9820271.287158.4158eragrostis_curvulaTVU3587969.230856.7308
BVRB_4g094660beta_vulgarisKMS9820271.782258.9109eragrostis_curvulaTVU3872969.711557.2115
BVRB_4g094660beta_vulgarisKMS9820277.722863.8614eutrema_salsugineumESQ5404173.708960.5634
BVRB_4g094660beta_vulgarisKMS9820266.336651.9802avena_sativa_sangAVESA.00010b.r2.2DG0351410.1.CDS65.686351.4706
BVRB_4g094660beta_vulgarisKMS9820266.831752.4752avena_sativa_sangAVESA.00010b.r2.2CG0274350.1.CDS53.149641.7323
BVRB_4g094660beta_vulgarisKMS9820266.336651.9802avena_sativa_sangAVESA.00010b.r2.2AG0196910.1.CDS65.686351.4706
BVRB_4g094660beta_vulgarisKMS9820279.207965.8416trifolium_pratenseTp57577_TGAC_v2_mRNA2536863.492152.7778
BVRB_4g094660beta_vulgarisKMS9820284.653571.7822solanum_lycopersicumSolyc08g065760.3.181.042768.7204
BVRB_4g094660beta_vulgarisKMS9820254.950545.0495solanum_lycopersicumSolyc10g038060.2.176.551762.7586
BVRB_4g094660beta_vulgarisKMS9820276.237665.3465vigna_angularisKOM2800163.114854.0984
BVRB_4g094660beta_vulgarisKMS9820283.663471.7822gossypium_raimondiiKJB0816979.71768.3962
BVRB_4g094660beta_vulgarisKMS9820272.772357.9208panicum_halliiPUZ7237371.014556.5217
BVRB_4g094660beta_vulgarisKMS9820278.217867.3267cajanus_cajanC.cajan_21472.t68.995659.3886
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614brassica_rapa_ro18A01p006980.1_BraROA.173.584960.8491
BVRB_4g094660beta_vulgarisKMS9820277.227764.3564brassica_rapa_ro18A08p025790.1_BraROA.172.558160.4651
BVRB_4g094660beta_vulgarisKMS9820280.19863.3663rosa_chinensisPRQ2740973.303257.9186
BVRB_4g094660beta_vulgarisKMS9820270.792159.4059musa_acuminataMa01_p03860.176.881764.5161
BVRB_4g094660beta_vulgarisKMS9820286.138673.2673corymbia_citriodoracds-KAF8015506.177.333365.7778
BVRB_4g094660beta_vulgarisKMS9820272.277258.4158eragrostis_tefEt_3B_028818.CDS62.93150.8621
BVRB_4g094660beta_vulgarisKMS9820274.257460.396eragrostis_tefEt_5B_044936.CDS45.180736.747
BVRB_4g094660beta_vulgarisKMS9820271.287157.4257oryza_punctataOPUNC07G16520.168.571455.2381
BVRB_4g094660beta_vulgarisKMS9820278.712967.8218daucus_carotaKZN0686076.076665.5502
BVRB_4g094660beta_vulgarisKMS9820280.19867.8218pistacia_veracds-EVM0021283.179.411867.1569
BVRB_4g094660beta_vulgarisKMS9820272.277257.9208echinochloa_crusgalliscaffold434.42.cds70.531456.5217
BVRB_4g094660beta_vulgarisKMS9820272.772358.4158echinochloa_crusgalliscaffold43.569.cds71.014557.0048
BVRB_4g094660beta_vulgarisKMS9820239.108920.7921ciona_savignyiENSCSAVP0000000628228.113914.9466
BVRB_4g094660beta_vulgarisKMS9820271.782258.9109brachypodium_distachyonKQK1586768.396256.1321
BVRB_4g094660beta_vulgarisKMS9820276.732763.8614arabidopsis_lyratafgenesh2_kg.7__1024__AT4G31460.173.113260.8491
BVRB_4g094660beta_vulgarisKMS9820271.287158.9109triticum_dicoccoidesTRIDC2AG028550.159.75149.3776
BVRB_4g094660beta_vulgarisKMS9820270.29757.4257triticum_dicoccoidesTRIDC2BG032270.158.677747.9339
BVRB_4g094660beta_vulgarisKMS9820270.29757.9208oryza_sativaOs07t0544900-0169.607857.3529
BVRB_4g094660beta_vulgarisKMS9820284.653570.7921solanum_tuberosumPGSC0003DMT40003592781.042767.7725
BVRB_4g094660beta_vulgarisKMS9820273.267361.8812arabidopsis_thalianaAT4G31460.169.811358.9623
BVRB_4g094660beta_vulgarisKMS9820269.80254.4554zea_maysZm00001eb106440_P00168.115953.1401
BVRB_4g094660beta_vulgarisKMS9820272.772356.9307zea_maysZm00001eb323470_P0017054.7619
BVRB_4g094660beta_vulgarisKMS9820285.643673.2673actinidia_chinensisPSS2893081.220769.4836
BVRB_4g094660beta_vulgarisKMS9820283.168372.2772actinidia_chinensisPSS0117881.553470.8738
BVRB_4g094660beta_vulgarisKMS9820286.138670.297olea_europaeaOE9A083063C180.184365.4378
BVRB_4g094660beta_vulgarisKMS9820276.732763.3663lactuca_sativacds-PLY67909.175.242762.1359
BVRB_4g094660beta_vulgarisKMS9820271.287158.4158triticum_aestivumTraesCS2D02G220700.151.428642.1429
BVRB_4g094660beta_vulgarisKMS9820271.287158.9109triticum_aestivumTraesCS2A02G214900.150.883442.0495
BVRB_4g094660beta_vulgarisKMS9820270.792157.9208triticum_aestivumTraesCS2B02G239900.155.426445.3488
BVRB_4g094660beta_vulgarisKMS9820279.70366.8317phaseolus_vulgarisESW0417368.510657.4468
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614brassica_napusCDY6728073.584960.8491
BVRB_4g094660beta_vulgarisKMS9820277.722864.3564brassica_napusCDY2330073.023360.4651
BVRB_4g094660beta_vulgarisKMS9820276.732763.3663brassica_napusCDY3643972.09359.5349
BVRB_4g094660beta_vulgarisKMS9820277.227763.3663brassica_napusCDY6801973.584960.3774
BVRB_4g094660beta_vulgarisKMS9820284.158471.7822cucumis_sativusKGN5568876.923165.6109
BVRB_4g094660beta_vulgarisKMS9820282.178271.2871corylus_avellanaCav08g05750.t142.239236.6412
BVRB_4g094660beta_vulgarisKMS9820260.891150.9901capsicum_annuumPHT7439283.673570.068
BVRB_4g094660beta_vulgarisKMS9820270.29757.9208oryza_glumipatulaOGLUM07G17360.169.607857.3529
BVRB_4g094660beta_vulgarisKMS9820271.287155.9406saccharum_spontaneumSspon.02G0035220-2C-mRNA-1:cds62.608749.1304
BVRB_4g094660beta_vulgarisKMS9820271.782256.4356saccharum_spontaneumSspon.02G0035220-3D-mRNA-1:cds69.047654.2857
BVRB_4g094660beta_vulgarisKMS9820270.792155.9406saccharum_spontaneumSspon.02G0035220-1B-mRNA-1:cds70.792155.9406
BVRB_4g094660beta_vulgarisKMS9820271.287155.9406saccharum_spontaneumSspon.02G0006010-1A-mRNA-1:cds62.608749.1304
BVRB_4g094660beta_vulgarisKMS9820273.267360.396nymphaea_colorataNC3G0204960.1:cds51.211142.2145
BVRB_4g094660beta_vulgarisKMS9820269.306957.4257nymphaea_colorataNC3G0225870.1:cds70.351858.2915
BVRB_4g094660beta_vulgarisKMS9820284.653571.2871vitis_viniferaVitvi18g01134_P00179.166766.6667
BVRB_4g094660beta_vulgarisKMS9820239.60427.7228ostreococcus_lucimarinusABO958776444.8
BVRB_4g094660beta_vulgarisKMS9820277.227763.8614camelina_sativaCsa11g011920.173.239460.5634
BVRB_4g094660beta_vulgarisKMS9820277.227763.3663camelina_sativaCsa12g014230.167.532555.4113
BVRB_4g094660beta_vulgarisKMS9820277.227763.3663camelina_sativaCsa10g011060.173.239460.0939
BVRB_4g094660beta_vulgarisKMS9820286.633776.2376sesamum_indicumSIN_1020753.t79.545570
BVRB_4g094660beta_vulgarisKMS9820266.336651.9802kalanchoe_fedtschenkoiKaladp0101s0252.1.v1.176.136459.6591
BVRB_4g094660beta_vulgarisKMS9820277.722862.8713dioscorea_rotundataDRNTG_08413.174.056659.9057
BVRB_4g094660beta_vulgarisKMS9820254.455440.099physcomitrium_patensPp3c2_35700V3.457.291742.1875
BVRB_4g094660beta_vulgarisKMS9820271.287158.4158secale_cerealeSECCE2Rv1G0089080.167.924555.6604
BVRB_4g094660beta_vulgarisKMS9820270.792154.9505papaver_somniferumRZC7018872.222256.0606
BVRB_4g094660beta_vulgarisKMS9820271.782255.9406papaver_somniferumRZC7114271.428655.665
BVRB_4g094660beta_vulgarisKMS9820256.435646.5347papaver_somniferumRZC7491879.166765.2778
BVRB_4g094660beta_vulgarisKMS9820271.782255.9406papaver_somniferumRZC5663471.428655.665

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression