Description

Ensembl ID BVRB_4g083110 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein isoform B
Status Confidence Length 3980 bases Strand Minus strand
Position 4 : 15561856 - 15565835 RNA binding domain Ribosomal_L18p
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT13530 Ribosomal_L18p PF00861 2.4e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT13530 1462 188aa KMT13530
- KMT13531 1425 198aa KMT13531

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g083110beta_vulgarisKMT1770029.824616.3743beta_vulgarisKMT1353125.757614.1414
BVRB_4g083110beta_vulgarisKMS9986749.456530.4348beta_vulgarisKMT1353145.959628.2828
BVRB_4g083110beta_vulgarisKMT1244745.61423.6842beta_vulgarisKMT1353126.262613.6364
BVRB_4g083110beta_vulgarisKMT0623033.582117.9104beta_vulgarisKMT1353122.727312.1212
BVRB_4g083110beta_vulgarisKMT0232337.398420.3252beta_vulgarisKMT1353123.232312.6263
BVRB_4g083110beta_vulgarisKMT0902624.331616.3102beta_vulgarisKMT1353145.959630.8081

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_4g083110beta_vulgarisKMT1353146.969730.303marchantia_polymorphaPTQ3386345.812829.5567
BVRB_4g083110beta_vulgarisKMT1353180.30371.2121theobroma_cacaoEOY1060678.325169.4581
BVRB_4g083110beta_vulgarisKMT1353178.282870.202citrullus_lanatusCla97C09G171050.182.887774.3316
BVRB_4g083110beta_vulgarisKMT1353176.767770.7071ficus_caricaFCD_00001106-RA:cds81.283474.8663
BVRB_4g083110beta_vulgarisKMT1353181.313170.202prunus_dulcisVVA1279186.096374.3316
BVRB_4g083110beta_vulgarisKMT1353175.252565.1515oryza_longistaminataKN539186.1_FGP00279.679168.984
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_rufipogonORUFI10G19580.180.213969.5187
BVRB_4g083110beta_vulgarisKMT1353146.464643.9394lupinus_angustifoliusOIV9546989.320484.466
BVRB_4g083110beta_vulgarisKMT1353176.767767.1717lupinus_angustifoliusOIW1331181.283471.123
BVRB_4g083110beta_vulgarisKMT1353177.272771.2121manihot_esculentaOAY3181481.818275.4011
BVRB_4g083110beta_vulgarisKMT1353176.262668.6869medicago_truncatulaKEH3299380.748772.7273
BVRB_4g083110beta_vulgarisKMT1353176.262667.6768ananas_comosusAco019632.1.mrna181.182872.043
BVRB_4g083110beta_vulgarisKMT1353178.787970.202cucumis_meloMELO3C004335.2.183.422574.3316
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_glaberrimaORGLA10G0135500.180.213969.5187
BVRB_4g083110beta_vulgarisKMT1353175.252566.6667oryza_brachyanthaOB10G25500.179.679170.5882
BVRB_4g083110beta_vulgarisKMT1353164.141455.0505triticum_urartuTuG1812G0300001676.01.T0167.914458.2888
BVRB_4g083110beta_vulgarisKMT1353176.767768.1818vigna_unguiculataVigun01g016700.7.v1.281.283472.1925
BVRB_4g083110beta_vulgarisKMT1353175.757667.6768vigna_unguiculataVigun11g192100.3.v1.270.754763.2075
BVRB_4g083110beta_vulgarisKMT1353176.767767.6768glycine_maxKRH5619567.857159.8214
BVRB_4g083110beta_vulgarisKMT1353177.777868.1818glycine_maxKRH6265482.352972.1925
BVRB_4g083110beta_vulgarisKMT1353176.262667.6768vigna_radiataVradi05g21310.167.410759.8214
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_turgidumTRITD1Bv1G134750.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_turgidumTRITD3Av1G058500.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_turgidumTRITD1Av1G141620.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353181.313170.202prunus_persicaONI0467486.096374.3316
BVRB_4g083110beta_vulgarisKMT1353180.808173.2323quercus_lobataQL02p102113:mrna85.561577.5401
BVRB_4g083110beta_vulgarisKMT1353181.313173.2323quercus_lobataQL02p102636:mrna86.096377.5401
BVRB_4g083110beta_vulgarisKMT1353173.737467.1717ipomoea_trilobaitb01g09700.t279.781472.6776
BVRB_4g083110beta_vulgarisKMT1353174.242469.697helianthus_annuusmRNA:HanXRQr2_Chr12g055714155.893552.4715
BVRB_4g083110beta_vulgarisKMT1353145.959644.4444helianthus_annuusCDS:HanXRQr2_Chr09g0378931.188.349585.4369
BVRB_4g083110beta_vulgarisKMT1353146.969744.9495cynara_cardunculusKVH9547890.291386.4078
BVRB_4g083110beta_vulgarisKMT1353178.787972.2222populus_trichocarpaPotri.013G029300.2.v4.183.422576.4706
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_indicaBGIOSGA033434-PA80.213969.5187
BVRB_4g083110beta_vulgarisKMT1353164.141455.5556lolium_perennecds.KYUSt_chr1.2517276.969766.6667
BVRB_4g083110beta_vulgarisKMT1353127.272713.6364homo_sapiensENSP000003560013015
BVRB_4g083110beta_vulgarisKMT1353177.272768.1818pisum_sativumPsat5g223440.1.cds81.38371.8085
BVRB_4g083110beta_vulgarisKMT1353125.757610.101caenorhabditis_elegansD2007.4.13011.7647
BVRB_4g083110beta_vulgarisKMT1353176.767767.1717brassica_junceacds.BjuA09g03430S58.687351.3514
BVRB_4g083110beta_vulgarisKMT1353177.272768.6869brassica_junceacds.BjuB02g03930S81.38372.3404
BVRB_4g083110beta_vulgarisKMT1353176.262668.6869brassica_junceacds.BjuB04g28150S45.074640.597
BVRB_4g083110beta_vulgarisKMT1353129.292915.1515drosophila_melanogasterFBpp008696531.182816.129
BVRB_4g083110beta_vulgarisKMT1353175.252565.6566leersia_perrieriLPERR10G14250.179.679169.5187
BVRB_4g083110beta_vulgarisKMT1353174.747565.6566setaria_viridisTKV9495279.144469.5187
BVRB_4g083110beta_vulgarisKMT1353174.242465.6566setaria_viridisTKW3721178.609669.5187
BVRB_4g083110beta_vulgarisKMT1353173.737466.6667malus_domestica_goldenmRNA:MD12G019200088.484880
BVRB_4g083110beta_vulgarisKMT1353181.313171.7172malus_domestica_goldenmRNA:MD04G017490086.096375.9358
BVRB_4g083110beta_vulgarisKMT1353181.313173.2323quercus_subercds-POF05021.186.096377.5401
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_nivaraONIVA10G20930.180.213969.5187
BVRB_4g083110beta_vulgarisKMT1353166.666762.6263citrus_clementinaESR4639390.41184.9315
BVRB_4g083110beta_vulgarisKMT1353177.272771.2121citrus_clementinaESR4639081.38375
BVRB_4g083110beta_vulgarisKMT1353174.747565.6566setaria_italicaKQK8993879.144469.5187
BVRB_4g083110beta_vulgarisKMT1353174.242465.6566setaria_italicaKQL2808478.609669.5187
BVRB_4g083110beta_vulgarisKMT1353174.242466.6667arabidopsis_hallerig18217.t177.777869.8413
BVRB_4g083110beta_vulgarisKMT1353164.646556.0606avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0000888.168.449259.3583
BVRB_4g083110beta_vulgarisKMT1353159.59651.0101eucalyptus_grandisKCW4599367.428657.7143
BVRB_4g083110beta_vulgarisKMT1353155.555643.4343eucalyptus_grandisKCW4600768.7553.75
BVRB_4g083110beta_vulgarisKMT1353156.060647.4747eucalyptus_grandisKCW7712757.51348.7047
BVRB_4g083110beta_vulgarisKMT1353176.767769.697eucalyptus_grandisKCW8495181.283473.7968
BVRB_4g083110beta_vulgarisKMT1353142.929339.3939eucalyptus_grandisKCW4601472.033966.1017
BVRB_4g083110beta_vulgarisKMT1353135.858625.2525selaginella_moellendorffiiEFJ2437566.355146.729
BVRB_4g083110beta_vulgarisKMT1353135.858625.2525selaginella_moellendorffiiEFJ3564066.355146.729
BVRB_4g083110beta_vulgarisKMT1353174.242466.6667fraxinus_excelsiorFRAEX38873_v2_000257420.2.cds78.609670.5882
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556aegilops_tauschiiAET1Gv20551800.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353168.686964.1414amborella_trichopodaERN0483891.275285.2349
BVRB_4g083110beta_vulgarisKMT1353175.252564.1414sorghum_bicolorEER9449379.679167.9144
BVRB_4g083110beta_vulgarisKMT1353177.272767.6768corchorus_capsularisOMO9093880.952470.8995
BVRB_4g083110beta_vulgarisKMT1353173.737469.697chenopodium_quinoaAUR62000908-RA:cds87.425182.6347
BVRB_4g083110beta_vulgarisKMT1353145.959644.9495juglans_regiacds.Jr11_01730_p288.349586.4078
BVRB_4g083110beta_vulgarisKMT1353176.262668.1818brassica_oleraceaBo8g112300.181.182872.5806
BVRB_4g083110beta_vulgarisKMT1353172.222265.6566brassica_oleraceaBo5g009320.182.65975.1445
BVRB_4g083110beta_vulgarisKMT1353174.747568.1818coffea_canephoraCDP1583581.318774.1758
BVRB_4g083110beta_vulgarisKMT1353169.191959.596digitaria_exilisDexi9A01G0029110.1:cds76.536365.9218
BVRB_4g083110beta_vulgarisKMT1353137.878832.3232digitaria_exilisDexi9B01G0027950.1:cds86.206973.5632
BVRB_4g083110beta_vulgarisKMT1353175.252569.697cannabis_sativa_femalecds.evm.model.06.1389.3.5bd9b13b79.679173.7968
BVRB_4g083110beta_vulgarisKMT1353175.252566.1616eragrostis_curvulaTVU3170940.161735.31
BVRB_4g083110beta_vulgarisKMT1353171.212162.1212eragrostis_curvulaTVU4531936.246831.6195
BVRB_4g083110beta_vulgarisKMT1353175.252566.1616eragrostis_curvulaTVU3172040.161735.31
BVRB_4g083110beta_vulgarisKMT1353175.757668.1818eutrema_salsugineumESQ3946579.787271.8085
BVRB_4g083110beta_vulgarisKMT1353175.252567.6768eutrema_salsugineumESQ3599082.320474.0331
BVRB_4g083110beta_vulgarisKMT1353164.646556.0606avena_sativa_sangAVESA.00010b.r2.1DG0176990.1.CDS68.449259.3583
BVRB_4g083110beta_vulgarisKMT1353164.646556.0606avena_sativa_sangAVESA.00010b.r2.1AG0058600.1.CDS68.449259.3583
BVRB_4g083110beta_vulgarisKMT1353164.141455.5556avena_sativa_sangAVESA.00010b.r2.1CG0084880.2.CDS67.914458.8235
BVRB_4g083110beta_vulgarisKMT1353175.757667.1717trifolium_pratenseTp57577_TGAC_v2_mRNA1924080.213971.123
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_barthiiOBART10G18440.180.213969.5187
BVRB_4g083110beta_vulgarisKMT1353143.939441.4141solanum_lycopersicumSolyc04g051030.1.1.184.46679.6116
BVRB_4g083110beta_vulgarisKMT1353142.929339.3939solanum_lycopersicumSolyc04g051020.2.1.182.524375.7282
BVRB_4g083110beta_vulgarisKMT1353173.737466.6667solanum_lycopersicumSolyc04g056530.2.180.219872.5275
BVRB_4g083110beta_vulgarisKMT1353173.737467.1717solanum_lycopersicumSolyc01g111810.3.172.277265.8416
BVRB_4g083110beta_vulgarisKMT1353167.676863.1313vigna_angularisKOM3408890.540584.4595
BVRB_4g083110beta_vulgarisKMT1353176.767767.6768vigna_angularisKOM4315381.283471.6578
BVRB_4g083110beta_vulgarisKMT1353177.777870.202gossypium_raimondiiKJB8080875.121967.8049
BVRB_4g083110beta_vulgarisKMT1353169.69759.0909gossypium_raimondiiKJB2433759.740350.6493
BVRB_4g083110beta_vulgarisKMT1353166.666762.1212gossypium_raimondiiKJB7663487.417281.457
BVRB_4g083110beta_vulgarisKMT1353175.252566.1616panicum_halliiPUZ4012779.679170.0535
BVRB_4g083110beta_vulgarisKMT1353175.252566.1616panicum_halliiPUZ3999279.679170.0535
BVRB_4g083110beta_vulgarisKMT1353176.767768.6869cajanus_cajanC.cajan_24424.t81.283472.7273
BVRB_4g083110beta_vulgarisKMT1353176.262668.1818brassica_rapa_ro18A09p079730.1_BraROA.181.621672.973
BVRB_4g083110beta_vulgarisKMT1353175.252567.1717brassica_rapa_ro18A06p006730.1_BraROA.133.408129.8206
BVRB_4g083110beta_vulgarisKMT1353181.313170.202rosa_chinensisPRQ4203286.096374.3316
BVRB_4g083110beta_vulgarisKMT1353173.737463.6364musa_acuminataMa02_p06560.268.224358.8785
BVRB_4g083110beta_vulgarisKMT1353173.737463.6364musa_acuminataMa02_p06520.175.257764.9485
BVRB_4g083110beta_vulgarisKMT1353176.767769.1919corymbia_citriodoracds-KAF8038948.181.283473.262
BVRB_4g083110beta_vulgarisKMT1353174.747566.1616eragrostis_tefEt_1B_011596.CDS79.144470.0535
BVRB_4g083110beta_vulgarisKMT1353175.252566.6667eragrostis_tefEt_1A_009052.CDS79.679170.5882
BVRB_4g083110beta_vulgarisKMT1353175.757664.6465oryza_punctataOPUNC10G16730.180.213968.4492
BVRB_4g083110beta_vulgarisKMT1353175.757664.6465oryza_punctataOPUNC01G16020.180.213968.4492
BVRB_4g083110beta_vulgarisKMT1353178.282870.7071daucus_carotaKZM9761449.050644.3038
BVRB_4g083110beta_vulgarisKMT1353176.767770.202daucus_carotaKZN1110983.516576.3736
BVRB_4g083110beta_vulgarisKMT1353176.767771.2121pistacia_veracds-EVM0018868.175.247569.802
BVRB_4g083110beta_vulgarisKMT1353175.252567.1717echinochloa_crusgalliscaffold32.481.cds61.316954.7325
BVRB_4g083110beta_vulgarisKMT1353172.222261.6162echinochloa_crusgalliscaffold85.69.cds21.439318.2909
BVRB_4g083110beta_vulgarisKMT1353169.69761.1111echinochloa_crusgalliscaffold5.785.cds72.631663.6842
BVRB_4g083110beta_vulgarisKMT1353132.323214.1414ciona_savignyiENSCSAVP0000000287828.828812.6126
BVRB_4g083110beta_vulgarisKMT1353164.646556.0606brachypodium_distachyonPNT6788168.449259.3583
BVRB_4g083110beta_vulgarisKMT1353174.747566.1616arabidopsis_lyratafgenesh2_kg.1__912__AT1G08845.178.306969.3122
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_dicoccoidesTRIDC1AG033350.268.449258.8235
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_dicoccoidesTRIDC3AG019570.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_dicoccoidesTRIDC1BG038720.268.449258.8235
BVRB_4g083110beta_vulgarisKMT1353175.757665.6566oryza_sativaOs10t0559900-0180.213969.5187
BVRB_4g083110beta_vulgarisKMT1353172.222265.6566solanum_tuberosumPGSC0003DMT40002726681.714374.2857
BVRB_4g083110beta_vulgarisKMT1353172.222265.6566solanum_tuberosumPGSC0003DMT40004792381.714374.2857
BVRB_4g083110beta_vulgarisKMT1353175.252566.6667arabidopsis_thalianaAT1G08845.263.675256.4103
BVRB_4g083110beta_vulgarisKMT1353174.747564.1414zea_maysZm00001eb023240_P00379.144467.9144
BVRB_4g083110beta_vulgarisKMT1353176.767772.2222actinidia_chinensisPSS2670283.516578.5714
BVRB_4g083110beta_vulgarisKMT1353175.757671.2121actinidia_chinensisPSS1962382.417677.4725
BVRB_4g083110beta_vulgarisKMT1353175.252567.6768olea_europaeaOE9A085486C480.978372.8261
BVRB_4g083110beta_vulgarisKMT1353158.585952.0202olea_europaeaOE9A072415C163.043555.9783
BVRB_4g083110beta_vulgarisKMT1353175.757667.1717lactuca_sativacds-PLY76835.176.923168.2051
BVRB_4g083110beta_vulgarisKMT1353151.010144.4444triticum_aestivumTraesCS1A02G220800.146.543840.553
BVRB_4g083110beta_vulgarisKMT1353164.141455.0505triticum_aestivumTraesCS1B02G234100.167.914458.2888
BVRB_4g083110beta_vulgarisKMT1353164.646555.5556triticum_aestivumTraesCS1D02G222300.168.449258.8235
BVRB_4g083110beta_vulgarisKMT1353172.727366.1616nicotiana_attenuataOIT0127979.120971.978
BVRB_4g083110beta_vulgarisKMT1353176.767767.1717phaseolus_vulgarisESW1817281.283471.123
BVRB_4g083110beta_vulgarisKMT1353177.272768.1818phaseolus_vulgarisESW2081381.818272.1925
BVRB_4g083110beta_vulgarisKMT1353176.262668.1818brassica_napusCDY2266167.71360.5381
BVRB_4g083110beta_vulgarisKMT1353176.262668.1818brassica_napusCDY0633481.621672.973
BVRB_4g083110beta_vulgarisKMT1353170.707163.6364brassica_napusCDX9502756.451650.8064
BVRB_4g083110beta_vulgarisKMT1353176.262667.6768brassica_napusCDX9353261.885254.918
BVRB_4g083110beta_vulgarisKMT1353178.787969.697cucumis_sativusKGN6085183.422573.7968
BVRB_4g083110beta_vulgarisKMT1353179.79874.7475corylus_avellanaCav02g07160.t184.49279.1444
BVRB_4g083110beta_vulgarisKMT1353148.484842.4242capsicum_annuumPHT861807565.625
BVRB_4g083110beta_vulgarisKMT1353172.222265.1515capsicum_annuumPHT7815581.714373.7143
BVRB_4g083110beta_vulgarisKMT1353173.737463.6364saccharum_spontaneumSspon.01G0053760-2D-mRNA-1:cds55.094347.5472
BVRB_4g083110beta_vulgarisKMT1353175.252564.1414saccharum_spontaneumSspon.08G0002140-3D-mRNA-1:cds60.323951.417
BVRB_4g083110beta_vulgarisKMT1353172.222262.1212saccharum_spontaneumSspon.08G0025030-1C-mRNA-1:cds5547.3077
BVRB_4g083110beta_vulgarisKMT1353174.747564.1414saccharum_spontaneumSspon.08G0002140-2B-mRNA-1:cds79.144467.9144
BVRB_4g083110beta_vulgarisKMT1353175.252563.6364saccharum_spontaneumSspon.08G0002140-1A-mRNA-1:cds51.916443.9024
BVRB_4g083110beta_vulgarisKMT1353167.676862.6263nymphaea_colorataNC2G0055780.1:cds88.741782.1192
BVRB_4g083110beta_vulgarisKMT1353179.79871.7172vitis_viniferaVitvi14g00336_P00184.49275.9358
BVRB_4g083110beta_vulgarisKMT1353182.323270.7071prunus_aviumPav_sc0000700.1_g950.1.mk:mrna65.256
BVRB_4g083110beta_vulgarisKMT1353175.757666.6667camelina_sativaCsa17g012350.178.947469.4737
BVRB_4g083110beta_vulgarisKMT1353174.747566.1616camelina_sativaCsa03g012290.178.306969.3122
BVRB_4g083110beta_vulgarisKMT1353172.222264.6465sesamum_indicumSIN_1007623.t83.139574.4186
BVRB_4g083110beta_vulgarisKMT1353174.242468.1818kalanchoe_fedtschenkoiKaladp0011s0440.1.v1.180.769274.1758
BVRB_4g083110beta_vulgarisKMT1353175.757668.1818dioscorea_rotundataDRNTG_11662.180.645272.5806
BVRB_4g083110beta_vulgarisKMT1353145.959631.3131physcomitrium_patensPp3c5_10680V3.341.743128.4404
BVRB_4g083110beta_vulgarisKMT1353164.141455.0505secale_cerealeSECCE1Rv1G0033130.167.914458.2888
BVRB_4g083110beta_vulgarisKMT1353173.737466.6667papaver_somniferumRZC4904377.659670.2128

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression