RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	BVRB_4g075480	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	6803 bases	Strand	Plus strand
Position	4 : 4413356 - 4420158	RNA binding domain	R3H , SUZ
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KMT14783	R3H	PF01424	2e-17	1
KMT14783	SUZ	PF12752	9.1e-06	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KMT14783	3726	292aa	KMT14783

Gene Model

Click here to download BVRB_4g075480's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BVRB_4g075480's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_4g075480

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_4g075480	beta_vulgaris	KMT14783	53.4247	38.3562	marchantia_polymorpha	PTQ33020	37.1429	26.6667
BVRB_4g075480	beta_vulgaris	KMT14783	68.4931	54.4521	theobroma_cacao	EOY09975	59.5238	47.3214
BVRB_4g075480	beta_vulgaris	KMT14783	58.5616	45.5479	citrullus_lanatus	Cla97C11G217140.1	57.1906	44.4816
BVRB_4g075480	beta_vulgaris	KMT14783	61.6438	51.0274	ficus_carica	FCD_00017965-RA:cds	63.6042	52.6502
BVRB_4g075480	beta_vulgaris	KMT14783	69.863	53.4247	prunus_dulcis	VVA13093	62.963	48.1481
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	41.0959	oryza_longistaminata	KN538826.1_FGP013	33.2681	23.4834
BVRB_4g075480	beta_vulgaris	KMT14783	56.8493	40.7534	oryza_rufipogon	ORUFI01G00060.1	46.7606	33.5211
BVRB_4g075480	beta_vulgaris	KMT14783	64.726	51.7123	lupinus_angustifolius	OIW07186	33.2746	26.5845
BVRB_4g075480	beta_vulgaris	KMT14783	70.2055	50.6849	manihot_esculenta	OAY42491	63.6646	45.9627
BVRB_4g075480	beta_vulgaris	KMT14783	63.6986	48.6301	medicago_truncatula	KEH42956	56.0241	42.7711
BVRB_4g075480	beta_vulgaris	KMT14783	61.3014	47.6027	ananas_comosus	Aco013500.1.mrna1	56.8254	44.127
BVRB_4g075480	beta_vulgaris	KMT14783	57.8767	42.4658	cucumis_melo	MELO3C008758.2.1	54.5161	40
BVRB_4g075480	beta_vulgaris	KMT14783	59.589	43.1507	oryza_brachyantha	OB01G10040.1	52.568	38.0665
BVRB_4g075480	beta_vulgaris	KMT14783	55.4795	42.1233	triticum_urartu	TuG1812G0300000982.01.T01	50.3106	38.1988
BVRB_4g075480	beta_vulgaris	KMT14783	67.1233	52.3973	vigna_unguiculata	Vigun07g162000.1.v1.2	61.442	47.9624
BVRB_4g075480	beta_vulgaris	KMT14783	67.4658	52.3973	glycine_max	KRH34210	61.7555	47.9624
BVRB_4g075480	beta_vulgaris	KMT14783	66.7808	53.0822	glycine_max	KRG92578	58.5586	46.5465
BVRB_4g075480	beta_vulgaris	KMT14783	67.8082	52.0548	vigna_radiata	Vradi08g13840.1	59.6386	45.7831
BVRB_4g075480	beta_vulgaris	KMT14783	56.1644	42.8082	triticum_turgidum	TRITD3Bv1G028790.2	50.4615	38.4615
BVRB_4g075480	beta_vulgaris	KMT14783	54.1096	40.7534	triticum_turgidum	TRITD3Av1G025020.1	41.3613	31.1518
BVRB_4g075480	beta_vulgaris	KMT14783	69.863	52.3973	prunus_persica	ONI05161	62.963	47.2222
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	45.8904	ipomoea_triloba	itb02g04760.t1	53.8941	41.7445
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	41.0959	helianthus_annuus	mRNA:HanXRQr2_Chr07g0287831	64.3939	45.4545
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	44.1781	cynara_cardunculus	KVI07925	59.6552	44.4828
BVRB_4g075480	beta_vulgaris	KMT14783	61.3014	46.5753	populus_trichocarpa	Potri.013G087300.1.v4.1	55.5901	42.236
BVRB_4g075480	beta_vulgaris	KMT14783	57.5342	41.0959	oryza_indica	BGIOSGA002573-PA	49.4118	35.2941
BVRB_4g075480	beta_vulgaris	KMT14783	51.3699	37.6712	lolium_perenne	cds.KYUSt_chr2.26974	55.9701	41.0448
BVRB_4g075480	beta_vulgaris	KMT14783	64.0411	51.7123	pisum_sativum	Psat4g220960.1.cds	60.3226	48.7097
BVRB_4g075480	beta_vulgaris	KMT14783	58.5616	42.1233	leersia_perrieri	LPERR01G00040.1	52.1341	37.5
BVRB_4g075480	beta_vulgaris	KMT14783	59.589	42.8082	setaria_viridis	TKV96062	52.568	37.7644
BVRB_4g075480	beta_vulgaris	KMT14783	69.5205	51.3699	malus_domestica_golden	mRNA:MD04G0187400	52.3196	38.6598
BVRB_4g075480	beta_vulgaris	KMT14783	67.4658	50.6849	quercus_suber	cds-POE84077.1	63.141	47.4359
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	41.7808	oryza_nivara	ONIVA01G00140.2	48.0226	34.4633
BVRB_4g075480	beta_vulgaris	KMT14783	39.0411	27.7397	citrus_clementina	ESR41802	48.7179	34.6154
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	42.8082	setaria_italica	KQK90846	52.2659	37.7644
BVRB_4g075480	beta_vulgaris	KMT14783	60.6164	41.0959	avena_sativa_ot3098	cds.AVESA.00001b.r3.3Ag0000386.1	51.6035	34.9854
BVRB_4g075480	beta_vulgaris	KMT14783	59.9315	41.4384	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Cg0000150.1	39.8633	27.5626
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	41.0959	avena_sativa_ot3098	cds.AVESA.00001b.r3.3Cg0000329.1	50.2907	34.8837
BVRB_4g075480	beta_vulgaris	KMT14783	65.0685	45.5479	asparagus_officinalis	ONK58766	59.9369	41.9558
BVRB_4g075480	beta_vulgaris	KMT14783	64.0411	52.3973	eucalyptus_grandis	KCW80646	60.3226	49.3548
BVRB_4g075480	beta_vulgaris	KMT14783	44.863	28.4247	selaginella_moellendorffii	EFJ15662	43.2343	27.3927
BVRB_4g075480	beta_vulgaris	KMT14783	60.274	42.8082	fraxinus_excelsior	FRAEX38873_v2_000150430.2.cds	58.2781	41.3907
BVRB_4g075480	beta_vulgaris	KMT14783	54.7945	40.7534	aegilops_tauschii	AET3Gv20187900.3	49.2308	36.6154
BVRB_4g075480	beta_vulgaris	KMT14783	29.4521	21.2329	amborella_trichopoda	ERN11868	47.2527	34.0659
BVRB_4g075480	beta_vulgaris	KMT14783	58.9041	42.1233	sorghum_bicolor	EER92266	51.9637	37.1601
BVRB_4g075480	beta_vulgaris	KMT14783	67.1233	51.0274	corchorus_capsularis	OMO92918	44.1441	33.5586
BVRB_4g075480	beta_vulgaris	KMT14783	79.7945	74.3151	chenopodium_quinoa	AUR62006691-RA:cds	80.6228	75.0865
BVRB_4g075480	beta_vulgaris	KMT14783	68.8356	51.7123	juglans_regia	cds.Jr08_14870_p1	63.4069	47.6341
BVRB_4g075480	beta_vulgaris	KMT14783	62.3288	44.1781	juglans_regia	cds.Jr08_14890_p1	57.7778	40.9524
BVRB_4g075480	beta_vulgaris	KMT14783	68.1507	51.0274	juglans_regia	cds.Jr08_14880_p1	63.5783	47.6038
BVRB_4g075480	beta_vulgaris	KMT14783	61.6438	47.9452	coffea_canephora	CDP04226	56.25	43.75
BVRB_4g075480	beta_vulgaris	KMT14783	62.6712	43.4931	eragrostis_curvula	TVU47018	54.6269	37.9104
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	41.0959	avena_sativa_sang	AVESA.00010b.r2.3CG0459240.1.CDS	50.2907	34.8837
BVRB_4g075480	beta_vulgaris	KMT14783	60.6164	41.0959	avena_sativa_sang	AVESA.00010b.r2.3AG0412090.1.CDS	51.6035	34.9854
BVRB_4g075480	beta_vulgaris	KMT14783	59.9315	40.7534	avena_sativa_sang	AVESA.00010b.r2.1CG0115690.1.CDS	51.3196	34.8974
BVRB_4g075480	beta_vulgaris	KMT14783	63.3562	51.3699	trifolium_pratense	Tp57577_TGAC_v2_mRNA15143	58.1761	47.1698
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	46.5753	trifolium_pratense	Tp57577_TGAC_v2_mRNA15150	32.58	25.6121
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	41.4384	oryza_barthii	OBART01G00060.2	40.1891	28.6052
BVRB_4g075480	beta_vulgaris	KMT14783	64.726	45.2055	solanum_lycopersicum	Solyc05g055830.3.1	60.7717	42.4437
BVRB_4g075480	beta_vulgaris	KMT14783	58.5616	42.8082	hordeum_vulgare	HORVU.MOREX.r3.3HG0232780.1	51.8182	37.8788
BVRB_4g075480	beta_vulgaris	KMT14783	68.4931	52.3973	vigna_angularis	KOM30030	62.6959	47.9624
BVRB_4g075480	beta_vulgaris	KMT14783	66.7808	52.0548	gossypium_raimondii	KJB26745	61.3208	47.7987
BVRB_4g075480	beta_vulgaris	KMT14783	57.5342	41.0959	panicum_hallii	PUZ41069	49.4118	35.2941
BVRB_4g075480	beta_vulgaris	KMT14783	59.2466	44.863	cajanus_cajan	C.cajan_07032.t	56.5359	42.8105
BVRB_4g075480	beta_vulgaris	KMT14783	69.863	54.4521	rosa_chinensis	PRQ41564	62.0061	48.3283
BVRB_4g075480	beta_vulgaris	KMT14783	62.3288	46.2329	musa_acuminata	Ma09_p07110.1	53.8462	39.9408
BVRB_4g075480	beta_vulgaris	KMT14783	65.0685	51.3699	corymbia_citriodora	cds-KAF8034883.1	58.2822	46.0123
BVRB_4g075480	beta_vulgaris	KMT14783	61.9863	44.863	eragrostis_tef	Et_4A_032614.CDS	54.3544	39.3393
BVRB_4g075480	beta_vulgaris	KMT14783	61.3014	44.5205	eragrostis_tef	Et_4B_036805.CDS	53.4328	38.806
BVRB_4g075480	beta_vulgaris	KMT14783	57.5342	41.0959	oryza_punctata	OPUNC01G00040.1	50.6024	36.1446
BVRB_4g075480	beta_vulgaris	KMT14783	58.9041	45.5479	pistacia_vera	cds-EVM0019149.1	57.5251	44.4816
BVRB_4g075480	beta_vulgaris	KMT14783	57.5342	41.7808	echinochloa_crusgalli	scaffold22.601.cds	50.1493	36.4179
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	42.4658	echinochloa_crusgalli	scaffold74.416.cds	50.1475	36.5782
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	42.1233	echinochloa_crusgalli	scaffold18.595.cds	50.4451	36.4985
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	42.4658	brachypodium_distachyon	KQJ92876	48.7106	35.5301
BVRB_4g075480	beta_vulgaris	KMT14783	55.137	42.1233	triticum_dicoccoides	TRIDC3AG010470.1	50	38.1988
BVRB_4g075480	beta_vulgaris	KMT14783	53.4247	40.411	triticum_dicoccoides	TRIDC3BG014240.1	44.1926	33.4278
BVRB_4g075480	beta_vulgaris	KMT14783	57.1918	40.7534	oryza_sativa	Os01t0100600-01	47.0423	33.5211
BVRB_4g075480	beta_vulgaris	KMT14783	64.726	45.5479	solanum_tuberosum	PGSC0003DMT400060335	60.7717	42.7653
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	41.7808	zea_mays	Zm00001eb017060_P001	51.8293	37.1951
BVRB_4g075480	beta_vulgaris	KMT14783	58.5616	41.7808	zea_mays	Zm00001eb394570_P001	52.2936	37.3089
BVRB_4g075480	beta_vulgaris	KMT14783	53.0822	39.3836	actinidia_chinensis	PSS05044	72.77	53.9906
BVRB_4g075480	beta_vulgaris	KMT14783	60.274	42.1233	actinidia_chinensis	PSR98852	61.324	42.8571
BVRB_4g075480	beta_vulgaris	KMT14783	61.3014	43.4931	olea_europaea	OE9A032276C1	58.3062	41.3681
BVRB_4g075480	beta_vulgaris	KMT14783	52.0548	37.6712	olea_europaea	OE9A097329C1	50.165	36.3036
BVRB_4g075480	beta_vulgaris	KMT14783	58.9041	43.4931	lactuca_sativa	cds-PLY97019.1	38.8262	28.6682
BVRB_4g075480	beta_vulgaris	KMT14783	56.8493	42.8082	triticum_aestivum	TraesCS3D02G086700.1	51.5528	38.8199
BVRB_4g075480	beta_vulgaris	KMT14783	55.4795	42.1233	triticum_aestivum	TraesCS3A02G086400.1	50.3106	38.1988
BVRB_4g075480	beta_vulgaris	KMT14783	56.1644	42.8082	triticum_aestivum	TraesCS3B02G101900.1	50.4615	38.4615
BVRB_4g075480	beta_vulgaris	KMT14783	64.0411	46.2329	nicotiana_attenuata	OIT03344	59.9359	43.2692
BVRB_4g075480	beta_vulgaris	KMT14783	65.7534	51.0274	phaseolus_vulgaris	ESW15976	60.3774	46.8553
BVRB_4g075480	beta_vulgaris	KMT14783	58.2192	44.1781	cucumis_sativus	KGN61245	55.0162	41.7476
BVRB_4g075480	beta_vulgaris	KMT14783	66.0959	50	corylus_avellana	Cav02g10090.t1	60.3125	45.625
BVRB_4g075480	beta_vulgaris	KMT14783	60.6164	42.4658	capsicum_annuum	PHT82525	53.6364	37.5758
BVRB_4g075480	beta_vulgaris	KMT14783	57.1918	40.411	oryza_glumipatula	OGLUM01G00060.1	47.0423	33.2394
BVRB_4g075480	beta_vulgaris	KMT14783	59.589	42.4658	saccharum_spontaneum	Sspon.01G0039390-2C-mRNA-1:cds	52.568	37.4622
BVRB_4g075480	beta_vulgaris	KMT14783	59.589	42.4658	saccharum_spontaneum	Sspon.01G0039390-3D-mRNA-1:cds	52.568	37.4622
BVRB_4g075480	beta_vulgaris	KMT14783	38.6986	26.0274	saccharum_spontaneum	Sspon.01G0009970-1A-mRNA-1	34.9845	23.5294
BVRB_4g075480	beta_vulgaris	KMT14783	52.0548	37.6712	nymphaea_colorata	NC2G0002840.1:cds	46.0606	33.3333
BVRB_4g075480	beta_vulgaris	KMT14783	66.0959	51.0274	vitis_vinifera	Vitvi04g01131_P001	62.4595	48.2201
BVRB_4g075480	beta_vulgaris	KMT14783	70.2055	53.0822	prunus_avium	Pav_sc0000744.1_g210.1.mk:mrna	59.2486	44.7977
BVRB_4g075480	beta_vulgaris	KMT14783	60.274	40.411	sesamum_indicum	SIN_1001860.t	54.6584	36.646
BVRB_4g075480	beta_vulgaris	KMT14783	64.0411	47.2603	kalanchoe_fedtschenkoi	Kaladp0048s0722.1.v1.1	59.3651	43.8095
BVRB_4g075480	beta_vulgaris	KMT14783	66.0959	43.8356	dioscorea_rotundata	DRNTG_32033.1	58.4848	38.7879
BVRB_4g075480	beta_vulgaris	KMT14783	53.4247	38.6986	physcomitrium_patens	Pp3c8_1020V3.1	33.5484	24.3011
BVRB_4g075480	beta_vulgaris	KMT14783	56.5069	42.1233	secale_cereale	SECCE3Rv1G0158030.1	50.4587	37.6147
BVRB_4g075480	beta_vulgaris	KMT14783	68.4931	48.2877	papaver_somniferum	RZC47265	59.8802	42.2156

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression