RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	BVRB_3g064030	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	2085 bases	Strand	Plus strand
Position	3 : 24490618 - 24492702	RNA binding domain	IBN_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KMT14887	IBN_N	PF03810	0.0002	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KMT14887	2085	95aa	KMT14887

Gene Model

Click here to download BVRB_3g064030's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BVRB_3g064030's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_3g064030

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_3g064030	beta_vulgaris	KMT14887	53.6842	41.0526	musa_acuminata	Ma03_p09250.1	68	52
BVRB_3g064030	beta_vulgaris	KMT14887	56.8421	38.9474	lactuca_sativa	cds-PLY85430.1	31.5789	21.6374

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression