Description

Ensembl ID BVRB_3g050570 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 3045 bases Strand Plus strand
Position 3 : 2635943 - 2638987 RNA binding domain RNase_P_Rpp14
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT16432 RNase_P_Rpp14 PF01900 1.2e-25 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT16432 1866 154aa KMT16432

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_3g050570beta_vulgarisKMS9778916.3886.68896beta_vulgarisKMT1643231.818212.987
BVRB_3g050570beta_vulgarisKMT143962511.4035beta_vulgarisKMT1643237.01316.8831

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_3g050570beta_vulgarisKMT1643288.96172.0779theobroma_cacaoEOY0523188.96172.0779
BVRB_3g050570beta_vulgarisKMT1643274.02662.987citrullus_lanatusCla97C09G173090.174.02662.987
BVRB_3g050570beta_vulgarisKMT1643286.363667.5325ficus_caricaFCD_00016749-RA:cds86.363667.5325
BVRB_3g050570beta_vulgarisKMT1643282.467566.8831prunus_dulcisVVA1142482.467566.8831
BVRB_3g050570beta_vulgarisKMT1643270.129955.1948oryza_longistaminataKN541713.1_FGP00171.052655.9211
BVRB_3g050570beta_vulgarisKMT1643269.480554.5455oryza_longistaminataKN539128.1_FGP00270.394755.2632
BVRB_3g050570beta_vulgarisKMT1643268.181853.8961oryza_rufipogonORUFI04G07630.12822.1333
BVRB_3g050570beta_vulgarisKMT1643266.233851.2987oryza_rufipogonORUFI05G10230.152.577340.7216
BVRB_3g050570beta_vulgarisKMT1643277.272760.3896lupinus_angustifoliusOIW1949181.506963.6986
BVRB_3g050570beta_vulgarisKMT1643258.441649.3507lupinus_angustifoliusOIW0251683.333370.3704
BVRB_3g050570beta_vulgarisKMT1643288.96177.2727manihot_esculentaOAY2380088.96177.2727
BVRB_3g050570beta_vulgarisKMT1643283.116965.5844medicago_truncatulaAES9844083.660166.0131
BVRB_3g050570beta_vulgarisKMT1643282.467566.8831ananas_comosusAco011280.1.mrna161.352749.7585
BVRB_3g050570beta_vulgarisKMT1643272.077962.3377cucumis_meloMELO3C023673.2.172.077962.3377
BVRB_3g050570beta_vulgarisKMT1643275.324758.4416oryza_glaberrimaORGLA04G0275600.175.81758.8235
BVRB_3g050570beta_vulgarisKMT1643275.324759.7403oryza_brachyanthaOB04G15280.175.81760.1307
BVRB_3g050570beta_vulgarisKMT1643277.922161.039triticum_urartuTuG1812G0200003020.01.T0178.947461.8421
BVRB_3g050570beta_vulgarisKMT1643285.714367.5325vigna_unguiculataVigun08g114700.1.v1.285.714367.5325
BVRB_3g050570beta_vulgarisKMT1643286.363671.4286glycine_maxKRH7258186.363671.4286
BVRB_3g050570beta_vulgarisKMT1643286.363670.1299glycine_maxKRH1696286.363670.1299
BVRB_3g050570beta_vulgarisKMT1643285.714368.8312vigna_radiataVradi06g07340.185.714368.8312
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_turgidumTRITD2Bv1G132890.151.054940.0844
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_turgidumTRITD2Av1G156860.179.605362.5
BVRB_3g050570beta_vulgarisKMT1643281.818266.2338prunus_persicaONI2581381.818266.2338
BVRB_3g050570beta_vulgarisKMT1643273.376664.2857quercus_lobataQL04p035447:mrna83.088272.7941
BVRB_3g050570beta_vulgarisKMT1643289.610475.3247quercus_lobataQL09p006048:mrna89.610475.3247
BVRB_3g050570beta_vulgarisKMT1643288.96172.7273ipomoea_trilobaitb03g24680.t588.96172.7273
BVRB_3g050570beta_vulgarisKMT1643287.662371.4286ipomoea_trilobaitb15g13110.t487.662371.4286
BVRB_3g050570beta_vulgarisKMT1643286.363669.4805helianthus_annuusmRNA:HanXRQr2_Chr02g005177186.928169.9346
BVRB_3g050570beta_vulgarisKMT1643283.766267.5325helianthus_annuusmRNA:HanXRQr2_Chr02g005176184.313767.9739
BVRB_3g050570beta_vulgarisKMT1643286.363674.026populus_trichocarpaPotri.015G001000.1.v4.186.363674.026
BVRB_3g050570beta_vulgarisKMT1643288.96176.6234populus_trichocarpaPotri.015G001200.7.v4.188.96176.6234
BVRB_3g050570beta_vulgarisKMT1643254.545542.2078oryza_indicaBGIOSGA040652-PA23.931618.5185
BVRB_3g050570beta_vulgarisKMT1643269.480555.1948oryza_indicaBGIOSGA018401-PA58.469946.4481
BVRB_3g050570beta_vulgarisKMT1643266.883151.9481oryza_indicaBGIOSGA040653-PA41.232
BVRB_3g050570beta_vulgarisKMT1643277.922160.3896lolium_perennecds.KYUSt_chr2.3171578.947461.1842
BVRB_3g050570beta_vulgarisKMT1643224.02611.6883caenorhabditis_elegansZC410.10.133.94516.5138
BVRB_3g050570beta_vulgarisKMT1643279.220856.4935brassica_junceacds.BjuA10g02710S81.879258.3893
BVRB_3g050570beta_vulgarisKMT1643240.909124.026saccharomyces_cerevisiaeYAL033W36.416221.3873
BVRB_3g050570beta_vulgarisKMT1643277.272760.3896setaria_viridisTKW2764778.289561.1842
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883setaria_viridisTKW0355179.605362.5
BVRB_3g050570beta_vulgarisKMT1643279.220861.039malus_domestica_goldenmRNA:MD01G019210083.561664.3836
BVRB_3g050570beta_vulgarisKMT1643279.870167.5325quercus_subercds-POF18158.184.246671.2329
BVRB_3g050570beta_vulgarisKMT1643279.220866.8831quercus_subercds-POE52236.183.561670.5479
BVRB_3g050570beta_vulgarisKMT1643282.467568.8312quercus_subercds-POE52240.149.034740.9266
BVRB_3g050570beta_vulgarisKMT1643272.077958.4416oryza_nivaraONIVA11G09930.370.700657.3248
BVRB_3g050570beta_vulgarisKMT1643287.01373.3766citrus_clementinaESR3311687.01373.3766
BVRB_3g050570beta_vulgarisKMT1643277.922162.3377setaria_italicaKQK9664176.433161.1465
BVRB_3g050570beta_vulgarisKMT1643277.272760.3896setaria_italicaKQL1574078.289561.1842
BVRB_3g050570beta_vulgarisKMT1643283.766265.5844arabidopsis_hallerig02095.t1.cds185.430566.8874
BVRB_3g050570beta_vulgarisKMT1643277.922162.987asparagus_officinalisONK7596478.431463.3987
BVRB_3g050570beta_vulgarisKMT1643290.909174.026eucalyptus_grandisKCW4667190.909174.026
BVRB_3g050570beta_vulgarisKMT1643290.909174.6753eucalyptus_grandisKCW4666565.116353.4884
BVRB_3g050570beta_vulgarisKMT1643290.259774.026eucalyptus_grandisKCW4408390.259774.026
BVRB_3g050570beta_vulgarisKMT1643279.220866.2338eucalyptus_grandisKCW4613077.215264.557
BVRB_3g050570beta_vulgarisKMT1643286.363670.7792fraxinus_excelsiorFRAEX38873_v2_000135370.2.cds86.363670.7792
BVRB_3g050570beta_vulgarisKMT1643278.571461.039aegilops_tauschiiAET2Gv20608200.151.931340.3433
BVRB_3g050570beta_vulgarisKMT1643275.324759.0909amborella_trichopodaERN0818974.35958.3333
BVRB_3g050570beta_vulgarisKMT1643277.272761.6883sorghum_bicolorEER9036478.289562.5
BVRB_3g050570beta_vulgarisKMT1643283.766268.1818corchorus_capsularisOMO7101589.583372.9167
BVRB_3g050570beta_vulgarisKMT1643296.753390.9091chenopodium_quinoaAUR62005952-RA:cds96.753390.9091
BVRB_3g050570beta_vulgarisKMT1643288.96176.6234juglans_regiacds.Jr16_04820_p188.96176.6234
BVRB_3g050570beta_vulgarisKMT1643286.363671.4286coffea_canephoraCDO9690486.363671.4286
BVRB_3g050570beta_vulgarisKMT1643277.272762.3377digitaria_exilisDexi7A01G0002310.1:cds42.049533.9223
BVRB_3g050570beta_vulgarisKMT1643277.272762.3377digitaria_exilisDexi7B01G0003150.1:cds40.614332.7645
BVRB_3g050570beta_vulgarisKMT1643287.662369.4805cannabis_sativa_femalecds.evm.model.10.114487.662369.4805
BVRB_3g050570beta_vulgarisKMT1643277.272760.3896eragrostis_curvulaTVU1347078.289561.1842
BVRB_3g050570beta_vulgarisKMT1643281.818261.6883eutrema_salsugineumESQ3645982.894762.5
BVRB_3g050570beta_vulgarisKMT1643271.428653.8961eutrema_salsugineumESQ5206184.615463.8462
BVRB_3g050570beta_vulgarisKMT1643278.571460.3896avena_sativa_sangAVESA.00010b.r2.2DG0334840.3.CDS79.605361.1842
BVRB_3g050570beta_vulgarisKMT1643278.571460.3896avena_sativa_sangAVESA.00010b.r2.2AG0215670.1.CDS79.605361.1842
BVRB_3g050570beta_vulgarisKMT1643278.571459.7403avena_sativa_sangAVESA.00010b.r2.2CG0294590.1.CDS79.605360.5263
BVRB_3g050570beta_vulgarisKMT1643278.571461.039trifolium_pratenseTp57577_TGAC_v2_mRNA604880.132562.2517
BVRB_3g050570beta_vulgarisKMT1643271.428657.7922oryza_barthiiOBART05G09510.170.063756.6879
BVRB_3g050570beta_vulgarisKMT1643269.480552.5974oryza_barthiiOBART04G06620.174.825256.6434
BVRB_3g050570beta_vulgarisKMT1643285.714367.5325solanum_lycopersicumSolyc01g006260.3.185.714367.5325
BVRB_3g050570beta_vulgarisKMT1643258.441644.8052hordeum_vulgareHORVU.MOREX.r3.3HG0315110.179.64661.0619
BVRB_3g050570beta_vulgarisKMT1643277.922159.0909hordeum_vulgareHORVU.MOREX.r3.3HG0315120.178.947459.8684
BVRB_3g050570beta_vulgarisKMT1643277.922161.039hordeum_vulgareHORVU.MOREX.r3.2HG0158900.178.947461.8421
BVRB_3g050570beta_vulgarisKMT1643284.415667.5325vigna_angularisKOM4810784.415667.5325
BVRB_3g050570beta_vulgarisKMT1643287.662370.7792gossypium_raimondiiKJB0894087.662370.7792
BVRB_3g050570beta_vulgarisKMT1643286.363670.1299gossypium_raimondiiKJB0635186.363670.1299
BVRB_3g050570beta_vulgarisKMT1643277.922163.6364panicum_halliiPUZ4647662.551.0417
BVRB_3g050570beta_vulgarisKMT1643287.662370.1299cajanus_cajanC.cajan_05237.t87.662370.1299
BVRB_3g050570beta_vulgarisKMT1643280.519566.8831rosa_chinensisPRQ4446480.519566.8831
BVRB_3g050570beta_vulgarisKMT1643284.415669.4805rosa_chinensisPRQ6062184.415669.4805
BVRB_3g050570beta_vulgarisKMT1643275.97459.7403musa_acuminataMa11_p03510.175.483959.3548
BVRB_3g050570beta_vulgarisKMT1643290.909175.974corymbia_citriodoracds-KAF7846870.190.909175.974
BVRB_3g050570beta_vulgarisKMT1643291.558475.974corymbia_citriodoracds-KAF8008279.191.558475.974
BVRB_3g050570beta_vulgarisKMT1643277.272761.6883eragrostis_tefEt_7A_051496.CDS78.289562.5
BVRB_3g050570beta_vulgarisKMT1643277.272761.039eragrostis_tefEt_7B_054556.CDS78.289561.8421
BVRB_3g050570beta_vulgarisKMT1643275.97460.3896oryza_punctataOPUNC05G08350.276.470660.7843
BVRB_3g050570beta_vulgarisKMT1643277.922161.039daucus_carotaKZM9608636.144628.3133
BVRB_3g050570beta_vulgarisKMT1643273.376661.6883daucus_carotaKZN0719773.376661.6883
BVRB_3g050570beta_vulgarisKMT1643285.714372.7273pistacia_veracds-EVM0013483.185.714372.7273
BVRB_3g050570beta_vulgarisKMT1643277.272761.039echinochloa_crusgalliscaffold139.40.cds50.423739.8305
BVRB_3g050570beta_vulgarisKMT1643276.623459.7403echinochloa_crusgalliscaffold21.424.cds54.883742.7907
BVRB_3g050570beta_vulgarisKMT1643276.623461.039echinochloa_crusgalliscaffold53.538.cds77.631661.8421
BVRB_3g050570beta_vulgarisKMT1643276.623461.039echinochloa_crusgalliscaffold21.425.cds41.258732.8671
BVRB_3g050570beta_vulgarisKMT1643279.220859.7403brachypodium_distachyonKQJ8141680.263260.5263
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_dicoccoidesTRIDC2AG038890.469.942254.9133
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_dicoccoidesTRIDC2BG041980.157.61945.2381
BVRB_3g050570beta_vulgarisKMT1643276.623461.039oryza_sativaOs04t0295100-0072.839558.0247
BVRB_3g050570beta_vulgarisKMT1643272.077958.4416oryza_sativaOs05t0270500-017560.8108
BVRB_3g050570beta_vulgarisKMT1643285.714366.8831solanum_tuberosumPGSC0003DMT40008188085.714366.8831
BVRB_3g050570beta_vulgarisKMT1643283.116965.5844arabidopsis_thalianaAT1G04635.184.768266.8874
BVRB_3g050570beta_vulgarisKMT1643277.272763.6364zea_maysZm00001eb200370_P00178.289564.4737
BVRB_3g050570beta_vulgarisKMT1643287.662376.6234actinidia_chinensisPSS3290187.662376.6234
BVRB_3g050570beta_vulgarisKMT1643286.363675.3247actinidia_chinensisPSS0452286.363675.3247
BVRB_3g050570beta_vulgarisKMT1643288.96174.026olea_europaeaOE9A111690C388.96174.026
BVRB_3g050570beta_vulgarisKMT1643285.714367.5325lactuca_sativacds-PLY84567.186.274567.9739
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_aestivumTraesCS2A02G270400.179.605362.5
BVRB_3g050570beta_vulgarisKMT1643278.571461.6883triticum_aestivumTraesCS2B02G289200.179.605362.5
BVRB_3g050570beta_vulgarisKMT1643278.571461.039triticum_aestivumTraesCS2D02G269500.179.605361.8421
BVRB_3g050570beta_vulgarisKMT1643283.766266.2338phaseolus_vulgarisESW1334583.766266.2338
BVRB_3g050570beta_vulgarisKMT1643283.766266.2338phaseolus_vulgarisESW3270283.766266.2338
BVRB_3g050570beta_vulgarisKMT1643274.675350arabis_alpinaKFK4280576.158950.9934
BVRB_3g050570beta_vulgarisKMT1643272.077962.987cucumis_sativusKGN4442776.551766.8966
BVRB_3g050570beta_vulgarisKMT1643288.96174.6753corylus_avellanaCav10g10050.t188.96174.6753
BVRB_3g050570beta_vulgarisKMT1643289.610475.3247corylus_avellanaCav01g03510.t189.610475.3247
BVRB_3g050570beta_vulgarisKMT1643283.766264.2857capsicum_annuumPHT9372984.868465.1316
BVRB_3g050570beta_vulgarisKMT1643274.675359.0909oryza_glumipatulaOGLUM04G06360.170.987756.1728
BVRB_3g050570beta_vulgarisKMT1643272.727357.7922oryza_glumipatulaOGLUM05G09920.157.435945.641
BVRB_3g050570beta_vulgarisKMT1643275.97459.7403saccharum_spontaneumSspon.08G0001710-3C-mRNA-1:cds76.470660.1307
BVRB_3g050570beta_vulgarisKMT1643276.623460.3896saccharum_spontaneumSspon.08G0001710-1A-mRNA-1:cds77.631661.1842
BVRB_3g050570beta_vulgarisKMT1643277.272761.039saccharum_spontaneumSspon.08G0001710-2B-mRNA-1:cds78.289561.8421
BVRB_3g050570beta_vulgarisKMT1643269.480557.1429nymphaea_colorataNC11G0118650.1:cds69.480557.1429
BVRB_3g050570beta_vulgarisKMT1643269.480557.1429nymphaea_colorataNC11G0118750.1:cds59.776549.162
BVRB_3g050570beta_vulgarisKMT1643291.558479.2208vitis_viniferaVitvi16g02055_P001.1.6037826c91.558479.2208
BVRB_3g050570beta_vulgarisKMT1643282.467566.8831prunus_aviumPav_sc0000138.1_g330.1.mk:mrna82.467566.8831
BVRB_3g050570beta_vulgarisKMT1643283.766264.2857camelina_sativaCsa17g007880.1.cds185.430565.5629
BVRB_3g050570beta_vulgarisKMT1643288.311770.1299sesamum_indicumSIN_1005927.t88.311770.1299
BVRB_3g050570beta_vulgarisKMT1643277.272760.3896kalanchoe_fedtschenkoiKaladp0008s0666.1.v1.176.282159.6154
BVRB_3g050570beta_vulgarisKMT1643281.818261.6883dioscorea_rotundataDRNTG_33185.181.818261.6883
BVRB_3g050570beta_vulgarisKMT1643263.636448.0519physcomitrium_patensPp3c14_9250V3.265.771849.6644
BVRB_3g050570beta_vulgarisKMT1643278.571460.3896secale_cerealeSECCE2Rv1G0099470.179.605361.1842
BVRB_3g050570beta_vulgarisKMT1643287.662366.2338papaver_somniferumRZC5407687.662366.2338
BVRB_3g050570beta_vulgarisKMT1643288.311766.8831papaver_somniferumRZC7344488.311766.8831

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression