RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	BVRB_2g036450	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	2536 bases	Strand	Plus strand
Position	2 : 18711498 - 18714033	RNA binding domain	Ribosomal_L18p
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KMT17700	Ribosomal_L18p	PF00861	5.5e-18	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KMT17700	1344	171aa	KMT17700

Gene Model

Click here to download BVRB_2g036450's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BVRB_2g036450's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_2g036450	beta_vulgaris	KMS99867	33.6957	16.3043	beta_vulgaris	KMT17700	36.2573	17.5439
BVRB_2g036450	beta_vulgaris	KMT12447	40.3509	17.5439	beta_vulgaris	KMT17700	26.9006	11.6959
BVRB_2g036450	beta_vulgaris	KMT06230	31.3433	15.6716	beta_vulgaris	KMT17700	24.5614	12.2807
BVRB_2g036450	beta_vulgaris	KMT02323	32.5203	17.8862	beta_vulgaris	KMT17700	23.3918	12.8655
BVRB_2g036450	beta_vulgaris	KMT13531	25.7576	14.1414	beta_vulgaris	KMT17700	29.8246	16.3743
BVRB_2g036450	beta_vulgaris	KMT09026	16.0428	6.95187	beta_vulgaris	KMT17700	35.0877	15.2047

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_2g036450	beta_vulgaris	KMT17700	70.7602	56.7251	theobroma_cacao	EOY01905	70.7602	56.7251
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	53.8012	citrullus_lanatus	Cla97C05G106260.1	65	51.1111
BVRB_2g036450	beta_vulgaris	KMT17700	60.2339	47.9532	ficus_carica	FCD_00036601-RA:cds	63.1902	50.3067
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	46.7836	ficus_carica	FCD_00014732-RA:cds	65.3595	52.2876
BVRB_2g036450	beta_vulgaris	KMT17700	63.1579	52.6316	prunus_dulcis	VVA20495	61.7143	51.4286
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	46.1988	oryza_rufipogon	ORUFI09G12470.2	21.7021	16.8085
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.0292	oryza_rufipogon	ORUFI03G04970.1	57.1429	44
BVRB_2g036450	beta_vulgaris	KMT17700	60.8187	50.2924	lupinus_angustifolius	OIW02136	62.6506	51.8072
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	52.6316	manihot_esculenta	OAY50020	67.6829	54.878
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	53.2164	medicago_truncatula	AES96772	66.8675	54.8193
BVRB_2g036450	beta_vulgaris	KMT17700	46.1988	37.4269	ananas_comosus	Aco004147.1.mrna1	74.5283	60.3774
BVRB_2g036450	beta_vulgaris	KMT17700	57.8947	45.0292	cucumis_melo	MELO3C012102.2.1	46.2617	35.9813
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_glaberrima	ORGLA03G0049500.1	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	60.2339	46.1988	oryza_brachyantha	OB03G15280.1	58.8571	45.1429
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	46.7836	triticum_urartu	TuG1812G0400003266.01.T01	56.4972	45.1977
BVRB_2g036450	beta_vulgaris	KMT17700	53.2164	40.3509	vigna_unguiculata	Vigun02g059800.1.v1.2	52.6012	39.8844
BVRB_2g036450	beta_vulgaris	KMT17700	64.3275	55.5556	glycine_max	KRH70739	64.7059	55.8824
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	54.9708	vigna_radiata	Vradi11g10380.1	64.3678	54.023
BVRB_2g036450	beta_vulgaris	KMT17700	57.8947	46.7836	triticum_turgidum	TRITD4Av1G005260.1	55.9322	45.1977
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	45.614	triticum_turgidum	TRITD4Bv1G168810.1	54.8023	44.0678
BVRB_2g036450	beta_vulgaris	KMT17700	61.9883	52.6316	prunus_persica	ONI30829	60.5714	51.4286
BVRB_2g036450	beta_vulgaris	KMT17700	69.5906	58.4795	quercus_lobata	QL03p068731:mrna	69.5906	58.4795
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	59.0643	ipomoea_triloba	itb02g03690.t1	67.0455	57.3864
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	57.3099	helianthus_annuus	mRNA:HanXRQr2_Chr09g0388401	69.8795	59.0361
BVRB_2g036450	beta_vulgaris	KMT17700	67.2515	56.1404	cynara_cardunculus	KVH92295	64.6067	53.9326
BVRB_2g036450	beta_vulgaris	KMT17700	70.1754	56.1404	populus_trichocarpa	Potri.008G087100.4.v4.1	72.7273	58.1818
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_indica	BGIOSGA011372-PA	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	54.386	42.1053	lolium_perenne	cds.KYUSt_chr4.48618	35.6322	27.5862
BVRB_2g036450	beta_vulgaris	KMT17700	52.0468	39.7661	lolium_perenne	cds.KYUSt_chr4.48622	66.4179	50.7463
BVRB_2g036450	beta_vulgaris	KMT17700	22.807	7.60234	homo_sapiens	ENSP00000356001	21.6667	7.22222
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	54.9708	pisum_sativum	Psat2g119200.1.cds	67.4699	56.6265
BVRB_2g036450	beta_vulgaris	KMT17700	16.9591	6.43275	caenorhabditis_elegans	D2007.4.1	17.0588	6.47059
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	57.3099	brassica_juncea	cds.BjuA09g06270S	71.9512	59.7561
BVRB_2g036450	beta_vulgaris	KMT17700	23.3918	10.5263	drosophila_melanogaster	FBpp0086965	21.5054	9.67742
BVRB_2g036450	beta_vulgaris	KMT17700	56.1404	45.614	leersia_perrieri	LPERR03G04580.1	55.814	45.3488
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.3684	setaria_viridis	TKV97985	53.125	42.1875
BVRB_2g036450	beta_vulgaris	KMT17700	66.0819	53.8012	malus_domestica_golden	mRNA:MD16G0064100	66.8639	54.4379
BVRB_2g036450	beta_vulgaris	KMT17700	48.538	38.0117	quercus_suber	cds-POF21256.1	63.3588	49.6183
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_nivara	ONIVA03G05000.1	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	71.9298	59.6491	citrus_clementina	ESR51944	72.3529	60
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.3684	setaria_italica	KQK92384	53.125	42.1875
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	54.386	arabidopsis_halleri	g10182.t1	69.6429	55.3571
BVRB_2g036450	beta_vulgaris	KMT17700	54.9708	43.2749	avena_sativa_ot3098	cds.AVESA.00001b.r3.4Ag0002280.1	53.1073	41.8079
BVRB_2g036450	beta_vulgaris	KMT17700	56.1404	43.8596	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Dg0003267.1	54.2373	42.3729
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	43.2749	avena_sativa_ot3098	cds.AVESA.00001b.r3.4Cg0001260.1	54.8023	41.8079
BVRB_2g036450	beta_vulgaris	KMT17700	51.462	40.3509	asparagus_officinalis	ONK65262	65.6716	51.4925
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	51.462	eucalyptus_grandis	KCW86581	68.2927	53.6585
BVRB_2g036450	beta_vulgaris	KMT17700	32.7485	25.731	fraxinus_excelsior	FRAEX38873_v2_000227950.1.cds	65.8824	51.7647
BVRB_2g036450	beta_vulgaris	KMT17700	70.1754	59.0643	fraxinus_excelsior	FRAEX38873_v2_000375590.1.cds	72.2892	60.8434
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	45.614	aegilops_tauschii	AET4Gv20695800.2	45.7547	36.7925
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.614	oryza_meridionalis	OMERI03G04880.3	51.8135	40.4145
BVRB_2g036450	beta_vulgaris	KMT17700	64.3275	50.2924	amborella_trichopoda	ERN05498	48.4581	37.8855
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.9532	sorghum_bicolor	EER92791	57.3034	46.0674
BVRB_2g036450	beta_vulgaris	KMT17700	70.1754	56.7251	corchorus_capsularis	OMO93225	71.8563	58.0838
BVRB_2g036450	beta_vulgaris	KMT17700	89.4737	78.9474	chenopodium_quinoa	AUR62005804-RA:cds	88.9535	78.4884
BVRB_2g036450	beta_vulgaris	KMT17700	88.8889	77.193	chenopodium_quinoa	AUR62032794-RA:cds	88.3721	76.7442
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	56.7251	juglans_regia	cds.Jr13_15480_p1	71.9512	59.1463
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	56.1404	brassica_oleracea	Bo8g106940.1	69.0476	57.1429
BVRB_2g036450	beta_vulgaris	KMT17700	69.5906	54.386	coffea_canephora	CDP21133	71.6867	56.0241
BVRB_2g036450	beta_vulgaris	KMT17700	72.5146	56.7251	coffea_canephora	CDP17550	73.3728	57.3965
BVRB_2g036450	beta_vulgaris	KMT17700	70.7602	55.5556	coffea_canephora	CDP21261	71.5976	56.213
BVRB_2g036450	beta_vulgaris	KMT17700	54.386	42.6901	coffea_canephora	CDP22206	84.5455	66.3636
BVRB_2g036450	beta_vulgaris	KMT17700	42.1053	32.7485	coffea_canephora	CDP22068	80.8989	62.9213
BVRB_2g036450	beta_vulgaris	KMT17700	47.9532	38.0117	coffea_canephora	CDP22076	85.4167	67.7083
BVRB_2g036450	beta_vulgaris	KMT17700	70.7602	54.9708	coffea_canephora	CDP16810	58.4541	45.4106
BVRB_2g036450	beta_vulgaris	KMT17700	60.2339	49.1228	digitaria_exilis	Dexi9B01G0045120.1:cds	57.5419	46.9274
BVRB_2g036450	beta_vulgaris	KMT17700	61.9883	49.7076	digitaria_exilis	Dexi9A01G0045840.1:cds	60.2273	48.2955
BVRB_2g036450	beta_vulgaris	KMT17700	63.7427	52.6316	cannabis_sativa_female	cds.novel_model_6691_5bd9a17a	67.284	55.5556
BVRB_2g036450	beta_vulgaris	KMT17700	61.4035	46.1988	eragrostis_curvula	TVU48247	54.6875	41.1458
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	54.386	eutrema_salsugineum	ESQ35393	70.303	56.3636
BVRB_2g036450	beta_vulgaris	KMT17700	54.9708	43.2749	avena_sativa_sang	AVESA.00010b.r2.4AG0622580.1.CDS	53.1073	41.8079
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	43.2749	avena_sativa_sang	AVESA.00010b.r2.4CG1277800.1.CDS	54.8023	41.8079
BVRB_2g036450	beta_vulgaris	KMT17700	56.1404	43.8596	avena_sativa_sang	AVESA.00010b.r2.1DG0129960.1.CDS	54.2373	42.3729
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	53.8012	trifolium_pratense	Tp57577_TGAC_v2_mRNA40562	66.8675	55.4217
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_barthii	OBART03G05190.1	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	52.6316	solanum_lycopersicum	Solyc05g007910.3.1	69.4118	52.9412
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	55.5556	vigna_angularis	KOM45764	64.3678	54.5977
BVRB_2g036450	beta_vulgaris	KMT17700	69.5906	56.1404	gossypium_raimondii	KJB50636	72.561	58.5366
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.3684	panicum_hallii	PUZ42635	39.5349	31.3953
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	56.7251	cajanus_cajan	C.cajan_41440.t	67.6829	59.1463
BVRB_2g036450	beta_vulgaris	KMT17700	66.6667	56.7251	cajanus_cajan	C.cajan_30499.t	69.5122	59.1463
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	56.7251	cajanus_cajan	C.cajan_41437.t	67.6829	59.1463
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	56.7251	brassica_rapa_ro18	A09p076250.1_BraROA.1	69.6429	57.7381
BVRB_2g036450	beta_vulgaris	KMT17700	66.0819	54.9708	rosa_chinensis	PRQ40774	68.4848	56.9697
BVRB_2g036450	beta_vulgaris	KMT17700	66.0819	54.9708	rosa_chinensis	PRQ25895	68.0723	56.6265
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	46.1988	musa_acuminata	Ma03_p01720.1	58.7209	45.9302
BVRB_2g036450	beta_vulgaris	KMT17700	67.2515	51.462	corymbia_citriodora	cds-KAF7851702.1	70.1219	53.6585
BVRB_2g036450	beta_vulgaris	KMT17700	61.9883	49.1228	eragrostis_tef	Et_4B_038593.CDS	54.0816	42.8571
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.3684	eragrostis_tef	Et_4A_034462.CDS	52.0408	41.3265
BVRB_2g036450	beta_vulgaris	KMT17700	60.2339	47.9532	oryza_punctata	OPUNC03G04900.1	48.5849	38.6792
BVRB_2g036450	beta_vulgaris	KMT17700	64.3275	55.5556	daucus_carota	KZN06320	80.8824	69.8529
BVRB_2g036450	beta_vulgaris	KMT17700	66.6667	56.1404	pistacia_vera	cds-EVM0013216.1	68.2635	57.485
BVRB_2g036450	beta_vulgaris	KMT17700	60.2339	48.538	echinochloa_crusgalli	scaffold157.268.cds	57.5419	46.3687
BVRB_2g036450	beta_vulgaris	KMT17700	55.5556	43.8596	echinochloa_crusgalli	scaffold179.236.cds	51.9126	40.9836
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	46.1988	echinochloa_crusgalli	scaffold104.344.cds	56.4246	44.1341
BVRB_2g036450	beta_vulgaris	KMT17700	21.6374	9.35672	ciona_savignyi	ENSCSAVP00000002878	16.6667	7.20721
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.614	brachypodium_distachyon	KQK23435	58.8235	45.8824
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	53.2164	arabidopsis_lyrata	fgenesh2_kg.1__1536__AT1G14205.1	52.9412	41.1765
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.0292	triticum_dicoccoides	TRIDC4AG002430.2	57.8035	44.5087
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	45.614	triticum_dicoccoides	TRIDC4BG049190.1	48.2587	38.806
BVRB_2g036450	beta_vulgaris	KMT17700	57.8947	45.0292	oryza_sativa	Os09t0439050-00	48.0583	37.3786
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_sativa	Os03t0169400-01	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	71.345	53.8012	solanum_tuberosum	PGSC0003DMT400047410	73.0539	55.0898
BVRB_2g036450	beta_vulgaris	KMT17700	66.6667	53.8012	arabidopsis_thaliana	AT1G14205.1	67.4556	54.4379
BVRB_2g036450	beta_vulgaris	KMT17700	59.6491	47.3684	zea_mays	Zm00001eb005360_P001	48.5714	38.5714
BVRB_2g036450	beta_vulgaris	KMT17700	51.462	42.1053	zea_mays	Zm00001eb402360_P002	64.7059	52.9412
BVRB_2g036450	beta_vulgaris	KMT17700	72.5146	57.8947	actinidia_chinensis	PSS13520	75.6098	60.3659
BVRB_2g036450	beta_vulgaris	KMT17700	70.7602	58.4795	olea_europaea	OE9A117412C2	72.8916	60.241
BVRB_2g036450	beta_vulgaris	KMT17700	71.345	59.0643	olea_europaea	OE9A027704C6	73.494	60.8434
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	56.1404	lactuca_sativa	cds-PLY97346.1	72.3926	58.8957
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	45.614	triticum_aestivum	TraesCS4B02G286300.1	54.8023	44.0678
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	45.614	triticum_aestivum	TraesCS4D02G285000.1	55.4286	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	57.8947	46.7836	triticum_aestivum	TraesCS4A02G017800.1	55.9322	45.1977
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	53.8012	nicotiana_attenuata	OIT28303	68.6391	54.4379
BVRB_2g036450	beta_vulgaris	KMT17700	66.6667	52.0468	nicotiana_attenuata	OIT28299	73.0769	57.0513
BVRB_2g036450	beta_vulgaris	KMT17700	64.9123	53.8012	phaseolus_vulgaris	ESW25221	65.2941	54.1176
BVRB_2g036450	beta_vulgaris	KMT17700	69.0059	56.7251	brassica_napus	CDY33764	70.2381	57.7381
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	55.5556	brassica_napus	CDX81619	69.0476	56.5476
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	55.5556	arabis_alpina	KFK43662	69.6429	56.5476
BVRB_2g036450	beta_vulgaris	KMT17700	66.6667	52.0468	cucumis_sativus	KGN51925	63.3333	49.4444
BVRB_2g036450	beta_vulgaris	KMT17700	68.4211	56.7251	corylus_avellana	Cav04g21040.t1	71.3415	59.1463
BVRB_2g036450	beta_vulgaris	KMT17700	67.2515	52.6316	capsicum_annuum	PHT67774	70.1219	54.878
BVRB_2g036450	beta_vulgaris	KMT17700	59.0643	45.614	oryza_glumipatula	OGLUM03G05070.1	57.7143	44.5714
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.614	saccharum_spontaneum	Sspon.01G0004020-3C-mRNA-1:cds	52.0833	40.625
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.614	saccharum_spontaneum	Sspon.01G0004020-4D-mRNA-1:cds	49.7512	38.806
BVRB_2g036450	beta_vulgaris	KMT17700	58.4795	45.614	saccharum_spontaneum	Sspon.01G0004020-2B-mRNA-1:cds	56.1798	43.8202
BVRB_2g036450	beta_vulgaris	KMT17700	52.6316	41.5205	nymphaea_colorata	NC9G0171030.1:cds	52.0231	41.0405
BVRB_2g036450	beta_vulgaris	KMT17700	67.2515	52.6316	vitis_vinifera	Vitvi12g01801_P001	64.9717	50.8475
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	54.9708	prunus_avium	Pav_sc0000220.1_g1340.1.mk:mrna	66.6667	55.9524
BVRB_2g036450	beta_vulgaris	KMT17700	65.4971	51.462	camelina_sativa	Csa14g017170.1	45.5285	35.7724
BVRB_2g036450	beta_vulgaris	KMT17700	67.2515	53.8012	camelina_sativa	Csa17g019600.1	68.0473	54.4379
BVRB_2g036450	beta_vulgaris	KMT17700	66.0819	52.6316	camelina_sativa	Csa03g017920.1	68.0723	54.2169
BVRB_2g036450	beta_vulgaris	KMT17700	71.345	54.9708	sesamum_indicum	SIN_1018777.t	73.9394	56.9697
BVRB_2g036450	beta_vulgaris	KMT17700	67.8363	49.1228	kalanchoe_fedtschenkoi	Kaladp0071s0101.1.v1.1	69.4611	50.2994
BVRB_2g036450	beta_vulgaris	KMT17700	63.7427	50.8772	dioscorea_rotundata	DRNTG_08993.1	63.7427	50.8772
BVRB_2g036450	beta_vulgaris	KMT17700	56.7251	46.1988	secale_cereale	SECCE7Rv1G0467430.1	55.4286	45.1429

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression