Description

Ensembl ID BVRB_2g030160 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 3255 bases Strand Minus strand
Position 2 : 7289341 - 7292595 RNA binding domain PUA , Methyltr_RsmB-F
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT18916 PUA PF01472 4.1e-06 1
KMT18916 Methyltr_RsmB-F PF01189 1.8e-37 2
KMT18916 Methyltr_RsmB-F PF01189 1.8e-37 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT18916 3255 538aa KMT18916

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_2g030160beta_vulgarisKMS9327231.216920.1058beta_vulgarisKMT1891610.96657.0632
BVRB_2g030160beta_vulgarisKMT1789229.778718.3099beta_vulgarisKMT1891627.509316.9145
BVRB_2g030160beta_vulgarisKMT1297432.566418.9381beta_vulgarisKMT1891634.200719.8885
BVRB_2g030160beta_vulgarisKMT1262624.748215.3957beta_vulgarisKMT1891631.970319.8885

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_2g030160beta_vulgarisKMT1891641.635730.4833chlamydomonas_reinhardtiiPNW7679524.480917.9235
BVRB_2g030160beta_vulgarisKMT1891644.981432.1561chlamydomonas_reinhardtiiPNW7438127.344619.548
BVRB_2g030160beta_vulgarisKMT1891665.241652.7881marchantia_polymorphaPTQ4330655.275644.7244
BVRB_2g030160beta_vulgarisKMT1891679.553969.145theobroma_cacaoEOX9312964.848556.3636
BVRB_2g030160beta_vulgarisKMT1891679.182267.1004citrullus_lanatusCla97C11G222460.168.709758.2258
BVRB_2g030160beta_vulgarisKMT1891679.739868.4015ficus_caricaFCD_00027957-RA:cds67.665658.0442
BVRB_2g030160beta_vulgarisKMT1891676.951766.7286prunus_dulcisVVA2917571.01261.578
BVRB_2g030160beta_vulgarisKMT1891659.107849.0706oryza_longistaminataKN539823.1_FGP00469.432357.6419
BVRB_2g030160beta_vulgarisKMT1891673.048360.4089oryza_rufipogonORUFI08G14080.167.064855.4608
BVRB_2g030160beta_vulgarisKMT1891678.624564.1264lupinus_angustifoliusOIW1630669.458156.6502
BVRB_2g030160beta_vulgarisKMT1891680.297469.3309manihot_esculentaOAY4276372.120262.2705
BVRB_2g030160beta_vulgarisKMT1891679.36865.9851medicago_truncatulaAET0035570.46258.5809
BVRB_2g030160beta_vulgarisKMT1891673.791862.0818ananas_comosusAco006749.1.mrna157.871748.688
BVRB_2g030160beta_vulgarisKMT1891664.869955.5762cucumis_meloMELO3C022960.2.175.215564.4397
BVRB_2g030160beta_vulgarisKMT1891675.092962.2677oryza_glaberrimaORGLA08G0109100.168.590856.8761
BVRB_2g030160beta_vulgarisKMT1891667.286255.7621oryza_brachyanthaOB08G20770.170.565358.4795
BVRB_2g030160beta_vulgarisKMT1891675.278862.0818triticum_urartuTuG1812G0700004097.01.T0168.644156.6102
BVRB_2g030160beta_vulgarisKMT1891678.996366.3569vigna_unguiculataVigun08g191800.1.v1.271.548860.101
BVRB_2g030160beta_vulgarisKMT1891677.695266.5427glycine_maxKRH1450470.48960.371
BVRB_2g030160beta_vulgarisKMT1891676.022363.7546vigna_radiataVradi06g02350.168.053257.0715
BVRB_2g030160beta_vulgarisKMT1891674.907161.71triticum_turgidumTRITD7Av1G202530.167.959555.9865
BVRB_2g030160beta_vulgarisKMT1891675.278862.2677triticum_turgidumTRITD7Bv1G155950.168.527956.6836
BVRB_2g030160beta_vulgarisKMT1891676.951767.2862prunus_persicaONI1775771.01262.0926
BVRB_2g030160beta_vulgarisKMT1891679.36867.8439quercus_lobataQL11p000196:mrna39.427533.7027
BVRB_2g030160beta_vulgarisKMT1891679.182267.8439ipomoea_trilobaitb11g06590.t171.476561.2416
BVRB_2g030160beta_vulgarisKMT1891680.669168.2156helianthus_annuusmRNA:HanXRQr2_Chr16g077051171.499260.4613
BVRB_2g030160beta_vulgarisKMT1891677.695266.5427cynara_cardunculusKVH9756866.244156.7353
BVRB_2g030160beta_vulgarisKMT1891678.438767.658populus_trichocarpaPotri.005G204900.4.v4.171.283861.4865
BVRB_2g030160beta_vulgarisKMT1891626.765822.4907oryza_indicaBGIOSGA027087-PA64.864954.5045
BVRB_2g030160beta_vulgarisKMT1891631.970327.1375oryza_indicaBGIOSGA027088-PA66.409356.3707
BVRB_2g030160beta_vulgarisKMT1891634.014927.3234oryza_indicaBGIOSGA027086-PA62.457350.1706
BVRB_2g030160beta_vulgarisKMT1891662.639450.7435lolium_perennecds.KYUSt_chr5.2597567.806854.9296
BVRB_2g030160beta_vulgarisKMT1891643.866229.9256homo_sapiensENSP0000036651950.319834.3284
BVRB_2g030160beta_vulgarisKMT1891672.304858.7361pisum_sativumPsat2g017040.1.cds66.609654.1096
BVRB_2g030160beta_vulgarisKMT1891676.579966.171brassica_junceacds.BjuA10g04550S70.427460.8547
BVRB_2g030160beta_vulgarisKMT1891675.836467.1004brassica_junceacds.BjuB06g19860S70.956562.7826
BVRB_2g030160beta_vulgarisKMT1891642.936829.368drosophila_melanogasterFBpp007820352.619635.9909
BVRB_2g030160beta_vulgarisKMT1891673.791861.1524leersia_perrieriLPERR08G10280.169.163857.3171
BVRB_2g030160beta_vulgarisKMT1891675.464763.0112setaria_viridisTKW0995567.89356.689
BVRB_2g030160beta_vulgarisKMT1891678.252866.5427malus_domestica_goldenmRNA:MD17G011840072.212761.4065
BVRB_2g030160beta_vulgarisKMT1891624.163620.4461malus_domestica_goldenmRNA:MD09G012900077.844365.8683
BVRB_2g030160beta_vulgarisKMT1891650.185942.3792quercus_subercds-POE62486.173.170761.7886
BVRB_2g030160beta_vulgarisKMT1891679.182267.658quercus_subercds-POE98486.138.206332.6457
BVRB_2g030160beta_vulgarisKMT1891667.65855.948oryza_nivaraONIVA08G13050.168.809156.8998
BVRB_2g030160beta_vulgarisKMT1891679.925769.3309citrus_clementinaESR5037572.147762.5839
BVRB_2g030160beta_vulgarisKMT1891675.464763.0112setaria_italicaKQL0155168.813657.4576
BVRB_2g030160beta_vulgarisKMT1891676.394166.5427arabidopsis_hallerig02302.t168.614459.7663
BVRB_2g030160beta_vulgarisKMT1891642.936835.6877avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0002857.270.212858.3587
BVRB_2g030160beta_vulgarisKMT1891675.464763.197avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0001359.168.813657.6271
BVRB_2g030160beta_vulgarisKMT1891674.907162.8253avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0001346.467.959556.9983
BVRB_2g030160beta_vulgarisKMT1891676.394163.9405asparagus_officinalisONK6889565.445954.7771
BVRB_2g030160beta_vulgarisKMT1891680.111568.0297eucalyptus_grandisKCW4743467.029556.9207
BVRB_2g030160beta_vulgarisKMT1891664.126451.3011selaginella_moellendorffiiEFJ0735462.613450.0907
BVRB_2g030160beta_vulgarisKMT1891648.141337.7323selaginella_moellendorffiiEFJ2728461.374448.1043
BVRB_2g030160beta_vulgarisKMT1891679.182267.8439fraxinus_excelsiorFRAEX38873_v2_000106100.1.cds70.065860.0329
BVRB_2g030160beta_vulgarisKMT1891674.721261.8959aegilops_tauschiiAET7Gv20921300.771.024758.8339
BVRB_2g030160beta_vulgarisKMT1891667.65855.7621oryza_meridionalisOMERI08G10410.273.535460.6061
BVRB_2g030160beta_vulgarisKMT1891638.104131.9703amborella_trichopodaERN0907971.929860.3509
BVRB_2g030160beta_vulgarisKMT1891673.977762.4535sorghum_bicolorOQU8029669.097258.3333
BVRB_2g030160beta_vulgarisKMT1891679.36868.5874corchorus_capsularisOMO9567573.116463.1849
BVRB_2g030160beta_vulgarisKMT1891678.810467.4721juglans_regiacds.Jr10_17140_p168.167258.3601
BVRB_2g030160beta_vulgarisKMT1891677.323467.1004brassica_oleraceaBo8g007170.170.151860.8769
BVRB_2g030160beta_vulgarisKMT1891675.836466.5427brassica_oleraceaBo5g007610.169.152560.678
BVRB_2g030160beta_vulgarisKMT1891678.996368.5874coffea_canephoraCDP1572372.525662.9693
BVRB_2g030160beta_vulgarisKMT1891665.613453.5316digitaria_exilisDexi6B01G0010120.1:cds65.009253.0387
BVRB_2g030160beta_vulgarisKMT1891666.542755.5762digitaria_exilisDexi6A01G0011900.1:cds49.791441.5855
BVRB_2g030160beta_vulgarisKMT1891680.483367.2862cannabis_sativa_femalecds.evm.model.10.197367.340656.2986
BVRB_2g030160beta_vulgarisKMT1891644.795538.29eragrostis_curvulaTVU0644569.653259.5376
BVRB_2g030160beta_vulgarisKMT1891636.059530.4833eragrostis_curvulaTVU0673867.595857.1429
BVRB_2g030160beta_vulgarisKMT1891675.836465.9851eutrema_salsugineumESQ3625568.686959.7643
BVRB_2g030160beta_vulgarisKMT1891666.17155.7621avena_sativa_sangAVESA.00010b.r2.1AG0017690.1.CDS69.941158.9391
BVRB_2g030160beta_vulgarisKMT1891670.260257.2491avena_sativa_sangAVESA.00010b.r2.1DG0168550.3.CDS61.066249.7577
BVRB_2g030160beta_vulgarisKMT1891674.907162.8253avena_sativa_sangAVESA.00010b.r2.1AG0049860.1.CDS67.959556.9983
BVRB_2g030160beta_vulgarisKMT1891678.624565.9851trifolium_pratenseTp57577_TGAC_v2_mRNA1050069.230858.1015
BVRB_2g030160beta_vulgarisKMT1891666.356953.7175oryza_barthiiOBART08G12390.167.613654.7348
BVRB_2g030160beta_vulgarisKMT1891678.438768.9591solanum_lycopersicumSolyc07g045070.3.169.067160.7201
BVRB_2g030160beta_vulgarisKMT1891674.907161.5242hordeum_vulgareHORVU.MOREX.r3.7HG0719480.168.189556.0068
BVRB_2g030160beta_vulgarisKMT1891678.438765.9851vigna_angularisKOM4645471.043859.7643
BVRB_2g030160beta_vulgarisKMT1891680.483368.9591gossypium_raimondiiKJB4291570.064760.0324
BVRB_2g030160beta_vulgarisKMT1891675.278863.9405panicum_halliiPUZ5122368.067257.8151
BVRB_2g030160beta_vulgarisKMT1891678.624565.7993cajanus_cajanC.cajan_41887.t72.431560.6164
BVRB_2g030160beta_vulgarisKMT1891675.464766.171brassica_rapa_ro18A10g503720.1_BraROA.168.465460.0337
BVRB_2g030160beta_vulgarisKMT1891675.464766.171brassica_rapa_ro18A08g506780.1_BraROA.168.465460.0337
BVRB_2g030160beta_vulgarisKMT1891676.208265.7993brassica_rapa_ro18A08p044640.1_BraROA.168.907659.4958
BVRB_2g030160beta_vulgarisKMT1891677.323465.7993rosa_chinensisPRQ5212670.508560
BVRB_2g030160beta_vulgarisKMT1891676.579965.4275musa_acuminataMa09_p06360.165.605156.051
BVRB_2g030160beta_vulgarisKMT1891678.624567.8439corymbia_citriodoracds-KAF8007806.167.897358.5875
BVRB_2g030160beta_vulgarisKMT1891674.163664.3123eragrostis_tefEt_8A_057985.CDS69.270860.0694
BVRB_2g030160beta_vulgarisKMT1891672.862562.8253eragrostis_tefEt_8B_058868.CDS68.531559.0909
BVRB_2g030160beta_vulgarisKMT1891673.420160.4089oryza_punctataOPUNC08G11290.268.695756.5217
BVRB_2g030160beta_vulgarisKMT1891678.624566.7286daucus_carotaKZM9369772.680461.6838
BVRB_2g030160beta_vulgarisKMT1891679.182269.5167pistacia_veracds-EVM0000747.166.355158.2555
BVRB_2g030160beta_vulgarisKMT1891679.182269.5167pistacia_veracds-EVM0022416.166.355158.2555
BVRB_2g030160beta_vulgarisKMT1891675.092963.5688echinochloa_crusgalliscaffold205.10.cds67.445757.0952
BVRB_2g030160beta_vulgarisKMT1891668.773257.4349echinochloa_crusgalliscaffold37.272.cds66.666755.6757
BVRB_2g030160beta_vulgarisKMT1891674.163662.2677brachypodium_distachyonKQJ9623068.439157.4614
BVRB_2g030160beta_vulgarisKMT1891676.394166.3569arabidopsis_lyrataAl_scaffold_0001_59868.614459.5993
BVRB_2g030160beta_vulgarisKMT1891674.721262.6394triticum_dicoccoidesTRIDC7BG044900.371.276659.7518
BVRB_2g030160beta_vulgarisKMT1891674.907161.8959triticum_dicoccoidesTRIDC7AG052450.168.421156.5365
BVRB_2g030160beta_vulgarisKMT1891674.907162.0818oryza_sativaOs08t0365900-0168.421156.7063
BVRB_2g030160beta_vulgarisKMT1891654.832743.8662solanum_tuberosumPGSC0003DMT40004480851.393741.115
BVRB_2g030160beta_vulgarisKMT1891675.836466.3569arabidopsis_thalianaAT1G06560.168.113559.5993
BVRB_2g030160beta_vulgarisKMT1891675.092964.1264zea_maysZm00001eb170650_P00369.059858.9744
BVRB_2g030160beta_vulgarisKMT1891619.516715.9851actinidia_chinensisPSS3581567.307755.1282
BVRB_2g030160beta_vulgarisKMT1891677.695265.9851actinidia_chinensisPSS1762471.944961.1015
BVRB_2g030160beta_vulgarisKMT1891662.639452.4164actinidia_chinensisPSS1640368.495957.3171
BVRB_2g030160beta_vulgarisKMT1891679.739868.0297olea_europaeaOE9A000985C270.559260.1974
BVRB_2g030160beta_vulgarisKMT1891642.193335.5019lactuca_sativacds-PLY62919.176.174564.094
BVRB_2g030160beta_vulgarisKMT1891636.059529.7398lactuca_sativacds-PLY88821.174.045861.0687
BVRB_2g030160beta_vulgarisKMT1891679.553966.171lactuca_sativacds-PLY83754.173.037560.7509
BVRB_2g030160beta_vulgarisKMT1891624.349417.8439lactuca_sativacds-PLY88884.165.548
BVRB_2g030160beta_vulgarisKMT1891675.092961.8959triticum_aestivumTraesCS7A02G375500.168.128256.1551
BVRB_2g030160beta_vulgarisKMT1891674.721261.8959triticum_aestivumTraesCS7D02G372000.168.251356.5365
BVRB_2g030160beta_vulgarisKMT1891675.278862.2677triticum_aestivumTraesCS7B02G277100.168.527956.6836
BVRB_2g030160beta_vulgarisKMT1891678.810468.2156nicotiana_attenuataOIT0000570.90361.3712
BVRB_2g030160beta_vulgarisKMT1891677.323466.9145nicotiana_attenuataOIS9999869.449160.1002
BVRB_2g030160beta_vulgarisKMT1891677.323465.6134phaseolus_vulgarisESW1341670.151859.5278
BVRB_2g030160beta_vulgarisKMT1891676.208266.3569brassica_napusCDY1558569.256860.3041
BVRB_2g030160beta_vulgarisKMT1891676.394166.3569brassica_napusCDX8651769.779360.6112
BVRB_2g030160beta_vulgarisKMT1891675.836466.5427brassica_napusCDY1020972.212463.3628
BVRB_2g030160beta_vulgarisKMT1891674.907165.6134brassica_napusCDY0665168.654260.1363
BVRB_2g030160beta_vulgarisKMT1891677.137567.2862arabis_alpinaKFK4297169.630960.7383
BVRB_2g030160beta_vulgarisKMT1891678.624567.4721cucumis_sativusKGN5493969.230859.4108
BVRB_2g030160beta_vulgarisKMT1891615.985113.9405corylus_avellanaCav05g10490.t176.106266.3717
BVRB_2g030160beta_vulgarisKMT1891676.579966.9145capsicum_annuumPHT7590570.427461.5385
BVRB_2g030160beta_vulgarisKMT1891671.747259.1078oryza_glumipatulaOGLUM08G13350.167.957755.9859
BVRB_2g030160beta_vulgarisKMT1891657.620847.7695saccharum_spontaneumSspon.06G0007350-1A-mRNA-1:cds66.523655.1502
BVRB_2g030160beta_vulgarisKMT1891614.869912.0818saccharum_spontaneumSspon.06G0022210-1B-mRNA-1:cds71.428658.0357
BVRB_2g030160beta_vulgarisKMT1891674.535362.8253nymphaea_colorataNC11G0014960.1:cds63.650853.6508
BVRB_2g030160beta_vulgarisKMT1891679.925768.7732vitis_viniferaVitvi12g00068_P00167.503958.0848
BVRB_2g030160beta_vulgarisKMT1891676.765866.7286prunus_aviumPav_sc0001215.1_g380.1.mk:mrna70.840561.578
BVRB_2g030160beta_vulgarisKMT1891656.877348.8848camelina_sativaCsa03g009980.130.447826.1692
BVRB_2g030160beta_vulgarisKMT1891675.836466.171camelina_sativaCsa14g007980.167.215858.6491
BVRB_2g030160beta_vulgarisKMT1891676.394166.9145camelina_sativaCsa17g009970.166.183657.971
BVRB_2g030160beta_vulgarisKMT1891670.074358.1784sesamum_indicumSIN_1003771.t74.505961.8577
BVRB_2g030160beta_vulgarisKMT1891662.639447.9554chara_brauniiGBG6362322.406917.1543
BVRB_2g030160beta_vulgarisKMT1891680.297466.7286kalanchoe_fedtschenkoiKaladp0019s0125.1.v1.173.469461.0544
BVRB_2g030160beta_vulgarisKMT1891638.2931.0409dioscorea_rotundataDRNTG_13973.362.424250.6061
BVRB_2g030160beta_vulgarisKMT1891664.869951.487physcomitrium_patensPp3c12_23090V3.153.609842.5499
BVRB_2g030160beta_vulgarisKMT1891675.092962.2677secale_cerealeSECCE7Rv1G0501630.168.358756.6836
BVRB_2g030160beta_vulgarisKMT1891611.52429.47955papaver_somniferumRZC6827588.571472.8571
BVRB_2g030160beta_vulgarisKMT1891678.810465.9851papaver_somniferumRZC8294269.508258.1967

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression