Description

Ensembl ID BVRB_1g017190 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 2419 bases Strand Minus strand
Position Bvchr1_un.sca002 : 703606 - 706024 RNA binding domain Ribosomal_L18p
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMS99867 Ribosomal_L18p PF00861 1.6e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMS99867 1325 184aa KMS99867

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_1g017190beta_vulgarisKMT1770036.257317.5439beta_vulgarisKMS9986733.695716.3043
BVRB_1g017190beta_vulgarisKMT1244756.140425.4386beta_vulgarisKMS9986734.782615.7609
BVRB_1g017190beta_vulgarisKMT0623036.567214.9254beta_vulgarisKMS9986726.630410.8696
BVRB_1g017190beta_vulgarisKMT0232340.650417.0732beta_vulgarisKMS9986727.173911.413
BVRB_1g017190beta_vulgarisKMT1353145.959628.2828beta_vulgarisKMS9986749.456530.4348
BVRB_1g017190beta_vulgarisKMT0902624.064214.1711beta_vulgarisKMS9986748.91328.8043

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_1g017190beta_vulgarisKMS9986763.58742.9348marchantia_polymorphaPTQ3756460.309340.7216
BVRB_1g017190beta_vulgarisKMS9986775.543564.6739theobroma_cacaoEOY1754275.543564.6739
BVRB_1g017190beta_vulgarisKMS9986748.369638.587citrullus_lanatusCla97C05G083370.188.118870.297
BVRB_1g017190beta_vulgarisKMS9986752.173945.6522citrullus_lanatusCla97C11G215000.194.117682.3529
BVRB_1g017190beta_vulgarisKMS9986775.543566.3043ficus_caricaFCD_00020719-RA:cds73.54564.5503
BVRB_1g017190beta_vulgarisKMS998677559.2391prunus_dulcisVVA3583476.243160.221
BVRB_1g017190beta_vulgarisKMS9986780.434869.5652prunus_dulcisVVA1970877.083366.6667
BVRB_1g017190beta_vulgarisKMS9986753.804346.1957oryza_longistaminataKN539661.1_FGP00698.019884.1584
BVRB_1g017190beta_vulgarisKMS9986735.869628.2609oryza_rufipogonORUFI06G17210.145.833336.1111
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_rufipogonORUFI02G30040.176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986774.456563.0435lupinus_angustifoliusOIV9970516.997514.3921
BVRB_1g017190beta_vulgarisKMS9986778.260966.8478manihot_esculentaOAY5863973.096462.4365
BVRB_1g017190beta_vulgarisKMS9986776.630463.0435medicago_truncatulaAES8772570.854358.2915
BVRB_1g017190beta_vulgarisKMS9986779.347866.3043ananas_comosusAco016573.1.mrna173.366861.3065
BVRB_1g017190beta_vulgarisKMS9986773.369657.0652cucumis_meloMELO3C006255.2.172.97356.7568
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_glaberrimaORGLA02G0245200.176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986734.239126.087oryza_glaberrimaORGLA06G0135500.144.055933.5664
BVRB_1g017190beta_vulgarisKMS9986773.369660.8696oryza_brachyanthaOB02G35670.168.877557.1429
BVRB_1g017190beta_vulgarisKMS9986776.630463.0435triticum_urartuTuG1812G0600002921.01.T0369.80257.4257
BVRB_1g017190beta_vulgarisKMS9986774.456562.5vigna_unguiculataVigun10g007200.1.v1.253.515644.9219
BVRB_1g017190beta_vulgarisKMS9986778.804367.9348glycine_maxKRH4490373.604163.4518
BVRB_1g017190beta_vulgarisKMS9986776.08766.3043glycine_maxKRH2373871.06661.9289
BVRB_1g017190beta_vulgarisKMS9986776.630464.1304vigna_radiataVradi02g00270.171.938860.2041
BVRB_1g017190beta_vulgarisKMS9986777.173963.0435triticum_turgidumTRITD6Bv1G153480.173.575160.1036
BVRB_1g017190beta_vulgarisKMS9986778.260964.6739triticum_turgidumTRITD6Av1G167910.173.846261.0256
BVRB_1g017190beta_vulgarisKMS9986775.543559.7826prunus_persicaONI2220076.795660.7735
BVRB_1g017190beta_vulgarisKMS9986780.434869.5652prunus_persicaONI3573477.083366.6667
BVRB_1g017190beta_vulgarisKMS9986781.521769.5652quercus_lobataQL04p025810:mrna77.720266.3212
BVRB_1g017190beta_vulgarisKMS9986777.173963.0435ipomoea_trilobaitb11g01660.t173.958360.4167
BVRB_1g017190beta_vulgarisKMS9986775.543564.6739helianthus_annuusmRNA:HanXRQr2_Chr11g050531176.795665.7459
BVRB_1g017190beta_vulgarisKMS9986774.456562.5cynara_cardunculusKVI0056076.111163.8889
BVRB_1g017190beta_vulgarisKMS9986779.891365.7609populus_trichocarpaPotri.013G108700.1.v4.178.191564.3617
BVRB_1g017190beta_vulgarisKMS9986781.521767.9348populus_trichocarpaPotri.019G081000.1.v4.172.463860.3865
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_indicaBGIOSGA005812-PA76.795663.5359
BVRB_1g017190beta_vulgarisKMS9986778.804366.8478lolium_perennecds.KYUSt_chr6.1217878.378466.4865
BVRB_1g017190beta_vulgarisKMS9986731.521714.6739homo_sapiensENSP0000035600132.222215
BVRB_1g017190beta_vulgarisKMS9986769.565257.0652pisum_sativumPsat7g226560.2.cds56.140446.0526
BVRB_1g017190beta_vulgarisKMS9986727.717411.9565caenorhabditis_elegansD2007.4.13012.9412
BVRB_1g017190beta_vulgarisKMS9986780.978366.3043brassica_junceacds.BjuB01g14030S79.679165.2406
BVRB_1g017190beta_vulgarisKMS9986780.978366.3043brassica_junceacds.BjuA05g24950S79.679165.2406
BVRB_1g017190beta_vulgarisKMS9986731.521714.6739drosophila_melanogasterFBpp008696531.182814.5161
BVRB_1g017190beta_vulgarisKMS9986775.543559.7826leersia_perrieriLPERR02G23190.170.20255.5556
BVRB_1g017190beta_vulgarisKMS9986772.826160.8696setaria_viridisTKW4098570.526358.9474
BVRB_1g017190beta_vulgarisKMS998677564.6739malus_domestica_goldenmRNA:MD15G034790073.404363.2979
BVRB_1g017190beta_vulgarisKMS9986780.978369.0217quercus_subercds-POF25294.159.839451.004
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_nivaraONIVA02G16480.176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986769.021760.3261citrus_clementinaESR4782080.891770.7006
BVRB_1g017190beta_vulgarisKMS9986772.826160.8696setaria_italicaKQL3100670.899559.2593
BVRB_1g017190beta_vulgarisKMS9986781.521767.3913arabidopsis_hallerig11093.t180.213966.3102
BVRB_1g017190beta_vulgarisKMS9986776.630463.0435eucalyptus_grandisKCW690247561.7021
BVRB_1g017190beta_vulgarisKMS9986755.434841.3043selaginella_moellendorffiiEFJ0589477.272757.5758
BVRB_1g017190beta_vulgarisKMS9986755.434841.3043selaginella_moellendorffiiEFJ2683877.272757.5758
BVRB_1g017190beta_vulgarisKMS9986738.58723.3696selaginella_moellendorffiiEFJ3524055.038833.3333
BVRB_1g017190beta_vulgarisKMS9986739.130423.913selaginella_moellendorffiiEFJ2417756.692934.6457
BVRB_1g017190beta_vulgarisKMS9986776.630463.0435fraxinus_excelsiorFRAEX38873_v2_000303940.1.cds76.630463.0435
BVRB_1g017190beta_vulgarisKMS9986778.804366.3043aegilops_tauschiiAET6Gv20674100.375.520863.5417
BVRB_1g017190beta_vulgarisKMS9986775.543561.9565oryza_meridionalisOMERI02G27600.176.795662.9834
BVRB_1g017190beta_vulgarisKMS9986776.08765.7609amborella_trichopodaERN0020974.074164.0212
BVRB_1g017190beta_vulgarisKMS9986776.08762.5sorghum_bicolorKXG3098374.074160.8466
BVRB_1g017190beta_vulgarisKMS998677563.587corchorus_capsularisOMO6212773.796862.5668
BVRB_1g017190beta_vulgarisKMS9986796.739190.7609chenopodium_quinoaAUR62023363-RA:cds96.739190.7609
BVRB_1g017190beta_vulgarisKMS9986796.739191.3043chenopodium_quinoaAUR62013792-RA:cds96.739191.3043
BVRB_1g017190beta_vulgarisKMS9986778.260965.7609juglans_regiacds.Jr05_02080_p176.595764.3617
BVRB_1g017190beta_vulgarisKMS9986779.347863.587brassica_oleraceaBo5g109940.177.659662.234
BVRB_1g017190beta_vulgarisKMS9986741.304329.8913brassica_oleraceaBo3g113860.142.222230.5556
BVRB_1g017190beta_vulgarisKMS9986777.173968.4783coffea_canephoraCDP0936575.132366.6667
BVRB_1g017190beta_vulgarisKMS998677563.587digitaria_exilisDexi1B01G0022730.1:cds72.631661.5789
BVRB_1g017190beta_vulgarisKMS9986775.543564.1304digitaria_exilisDexi1A01G0023680.1:cds73.157962.1053
BVRB_1g017190beta_vulgarisKMS9986778.804365.7609cannabis_sativa_femalecds.evm.model.01.162375.916263.3508
BVRB_1g017190beta_vulgarisKMS9986778.804365.7609cannabis_sativa_femalecds.novel_model_1804_5bd9a17a75.520863.0208
BVRB_1g017190beta_vulgarisKMS9986776.08760.8696eragrostis_curvulaTVU2807274.074159.2593
BVRB_1g017190beta_vulgarisKMS9986775.543560.3261eragrostis_curvulaTVT9974173.54558.7302
BVRB_1g017190beta_vulgarisKMS9986780.978365.7609eutrema_salsugineumESQ4786179.679164.7059
BVRB_1g017190beta_vulgarisKMS9986779.347866.3043avena_sativa_sangAVESA.00010b.r2.6CG1084350.1.CDS.178.918965.9459
BVRB_1g017190beta_vulgarisKMS9986779.347865.2174avena_sativa_sangAVESA.00010b.r2.6DG1169340.1.CDS.178.918964.8649
BVRB_1g017190beta_vulgarisKMS9986779.347865.2174avena_sativa_sangAVESA.00010b.r2.6AG1030430.1.CDS.178.918964.8649
BVRB_1g017190beta_vulgarisKMS998677557.6087trifolium_pratenseTp57577_TGAC_v2_mRNA3529471.502654.9223
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_barthiiOBART02G28520.176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986778.804366.8478solanum_lycopersicumSolyc01g088470.3.178.804366.8478
BVRB_1g017190beta_vulgarisKMS9986776.630464.1304vigna_angularisKOM5132073.437561.4583
BVRB_1g017190beta_vulgarisKMS9986777.173966.8478gossypium_raimondiiKJB1980575.132365.0794
BVRB_1g017190beta_vulgarisKMS9986775.543565.2174gossypium_raimondiiKJB3046773.54563.4921
BVRB_1g017190beta_vulgarisKMS998677562.5panicum_halliiPUZ7713473.404361.1702
BVRB_1g017190beta_vulgarisKMS9986765.217458.1522cajanus_cajanC.cajan_23836.t.cds191.603181.6794
BVRB_1g017190beta_vulgarisKMS9986778.804363.587brassica_rapa_ro18A05p038360.1_BraROA.177.127762.234
BVRB_1g017190beta_vulgarisKMS998677559.7826rosa_chinensisPRQ5701078.409162.5
BVRB_1g017190beta_vulgarisKMS9986782.608771.1957rosa_chinensisPRQ2047880.851169.6809
BVRB_1g017190beta_vulgarisKMS9986777.173964.6739musa_acuminataMa04_p21010.17159.5
BVRB_1g017190beta_vulgarisKMS9986771.195758.6957corymbia_citriodoracds-KAF8026685.169.680957.4468
BVRB_1g017190beta_vulgarisKMS9986777.717464.1304corymbia_citriodoracds-KAF8026816.169.082157.0048
BVRB_1g017190beta_vulgarisKMS9986776.08759.7826eragrostis_tefEt_1A_009466.CDS74.074158.2011
BVRB_1g017190beta_vulgarisKMS9986745.652233.6957eragrostis_tefEt_1B_013121.CDS61.764745.5882
BVRB_1g017190beta_vulgarisKMS9986772.826161.413oryza_punctataOPUNC02G26190.176.136464.2045
BVRB_1g017190beta_vulgarisKMS9986766.847859.2391daucus_carotaKZM8191989.130478.9855
BVRB_1g017190beta_vulgarisKMS9986775.543565.2174pistacia_veracds-EVM0029267.173.54563.4921
BVRB_1g017190beta_vulgarisKMS998677563.0435echinochloa_crusgalliscaffold108.26.cds72.631661.0526
BVRB_1g017190beta_vulgarisKMS998677563.0435echinochloa_crusgalliscaffold2.928.cds72.251360.733
BVRB_1g017190beta_vulgarisKMS9986774.456562.5echinochloa_crusgalliscaffold46.307.cds71.727760.2094
BVRB_1g017190beta_vulgarisKMS9986729.347812.5ciona_savignyiENSCSAVP0000000287824.324310.3604
BVRB_1g017190beta_vulgarisKMS9986747.282638.587brachypodium_distachyonKQK0083058.783847.973
BVRB_1g017190beta_vulgarisKMS9986781.521767.3913arabidopsis_lyratascaffold_302403.180.213966.3102
BVRB_1g017190beta_vulgarisKMS9986778.260964.6739triticum_dicoccoidesTRIDC6BG047310.173.469460.7143
BVRB_1g017190beta_vulgarisKMS9986778.804365.7609triticum_dicoccoidesTRIDC6AG040380.378.378465.4054
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_sativaOs02t0689700-0176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986778.260966.3043solanum_tuberosumPGSC0003DMT40000422176.595764.8936
BVRB_1g017190beta_vulgarisKMS9986782.065268.4783arabidopsis_thalianaAT3G20230.180.748767.3797
BVRB_1g017190beta_vulgarisKMS9986752.717444.5652zea_maysZm00001eb187680_P00257.396548.5207
BVRB_1g017190beta_vulgarisKMS9986776.630461.9565zea_maysZm00001eb251090_P00174.603260.3175
BVRB_1g017190beta_vulgarisKMS9986783.152274.4565actinidia_chinensisPSS2484082.258173.6559
BVRB_1g017190beta_vulgarisKMS9986782.065272.8261actinidia_chinensisPSS1008581.182872.043
BVRB_1g017190beta_vulgarisKMS9986746.739139.1304olea_europaeaOE9A098298C186.868772.7273
BVRB_1g017190beta_vulgarisKMS9986776.08763.587olea_europaeaOE9A092773C176.08763.587
BVRB_1g017190beta_vulgarisKMS9986780.434870.1087lactuca_sativacds-PLY78558.179.569969.3548
BVRB_1g017190beta_vulgarisKMS9986778.260964.6739triticum_aestivumTraesCS6B02G290300.1.cds177.837864.3243
BVRB_1g017190beta_vulgarisKMS9986778.804365.7609triticum_aestivumTraesCS6A02G263200.1.cds178.378465.4054
BVRB_1g017190beta_vulgarisKMS9986776.08763.587triticum_aestivumTraesCS6D02G243700.176.08763.587
BVRB_1g017190beta_vulgarisKMS9986775.543564.1304phaseolus_vulgarisESW0329972.395861.4583
BVRB_1g017190beta_vulgarisKMS9986780.978366.3043brassica_napusCDY2539979.679165.2406
BVRB_1g017190beta_vulgarisKMS9986779.891364.1304brassica_napusCDY2980479.459563.7838
BVRB_1g017190beta_vulgarisKMS9986780.434865.7609arabis_alpinaKFK3934779.144464.7059
BVRB_1g017190beta_vulgarisKMS998677558.6957cucumis_sativusKGN5666774.193658.0645
BVRB_1g017190beta_vulgarisKMS9986778.804366.8478corylus_avellanaCav01g31020.t177.540165.7754
BVRB_1g017190beta_vulgarisKMS9986738.58730.9783capsicum_annuumPHT8553462.831950.4425
BVRB_1g017190beta_vulgarisKMS9986740.217433.6957capsicum_annuumPHT9276974.747562.6263
BVRB_1g017190beta_vulgarisKMS9986735.869630.4348capsicum_annuumPHT8805582.570
BVRB_1g017190beta_vulgarisKMS9986778.804368.4783capsicum_annuumPHT9527477.95767.7419
BVRB_1g017190beta_vulgarisKMS9986738.043532.0652capsicum_annuumPHT8208877.777865.5556
BVRB_1g017190beta_vulgarisKMS9986755.978338.587capsicum_annuumPHT6247550.990135.1485
BVRB_1g017190beta_vulgarisKMS9986755.978340.2174capsicum_annuumPHT6724750.990136.6337
BVRB_1g017190beta_vulgarisKMS9986738.58729.8913capsicum_annuumPHT9303767.61952.381
BVRB_1g017190beta_vulgarisKMS9986735.326126.6304oryza_glumipatulaOGLUM06G17370.147.445335.7664
BVRB_1g017190beta_vulgarisKMS9986775.543562.5oryza_glumipatulaOGLUM02G29100.176.795663.5359
BVRB_1g017190beta_vulgarisKMS9986775.543562.5saccharum_spontaneumSspon.04G0005950-2D-mRNA-172.395859.8958
BVRB_1g017190beta_vulgarisKMS9986776.08763.587nymphaea_colorataNC3G0226200.1:cds55.118146.063
BVRB_1g017190beta_vulgarisKMS9986782.065272.8261vitis_viniferaVitvi15g00377_P00182.513773.224
BVRB_1g017190beta_vulgarisKMS9986781.521771.1957prunus_aviumPav_sc0006558.1_g020.1.mk:mrna78.12568.2292
BVRB_1g017190beta_vulgarisKMS998677559.2391prunus_aviumPav_sc0002266.1_g120.1.mk:mrna66.028752.1531
BVRB_1g017190beta_vulgarisKMS9986782.065266.8478camelina_sativaCsa01g023290.180.748765.7754
BVRB_1g017190beta_vulgarisKMS9986782.065267.3913camelina_sativaCsa15g029410.180.748766.3102
BVRB_1g017190beta_vulgarisKMS9986782.065267.3913camelina_sativaCsa19g028040.180.748766.3102
BVRB_1g017190beta_vulgarisKMS9986773.91361.9565sesamum_indicumSIN_1003191.t52.713244.186
BVRB_1g017190beta_vulgarisKMS9986765.217442.9348chara_brauniiGBG7289762.541.1458
BVRB_1g017190beta_vulgarisKMS9986777.717464.1304kalanchoe_fedtschenkoiKaladp0033s0121.1.v1.174.479261.4583
BVRB_1g017190beta_vulgarisKMS9986740.217435.3261kalanchoe_fedtschenkoiKaladp0037s0471.1.v1.1.CDS.193.670982.2785
BVRB_1g017190beta_vulgarisKMS998677566.8478dioscorea_rotundataDRNTG_15850.172.251364.3979
BVRB_1g017190beta_vulgarisKMS9986768.478348.3696physcomitrium_patensPAC:32960307.CDS.164.285745.4082
BVRB_1g017190beta_vulgarisKMS9986778.260965.7609secale_cerealeSECCE6Rv1G0402180.1.CDS.177.837865.4054
BVRB_1g017190beta_vulgarisKMS9986777.717463.0435papaver_somniferumRZC6931173.711359.7938
BVRB_1g017190beta_vulgarisKMS9986777.173963.0435papaver_somniferumRZC7415273.195959.7938

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression