Description

Ensembl ID BVRB_1g005730 Gene ID Accession -
Symbol Alias - Full Name Cell division protein FtsY homolog, chloroplastic
Status Confidence Length 4375 bases Strand Plus strand
Position 1 : 6365875 - 6370249 RNA binding domain SRP54 , SRP54_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT20591 SRP54 PF00448 4.4e-73 1
KMT20591 SRP54_N PF02881 2e-08 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT20591 2418 369aa KMT20591

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_1g005730beta_vulgarisKMT0677126.371717.3451beta_vulgarisKMT2059140.379426.5583
BVRB_1g005730beta_vulgarisKMT0063529.141717.1657beta_vulgarisKMT2059139.566423.3062
BVRB_1g005730beta_vulgarisKMT0912128.824516.4251beta_vulgarisKMT2059148.509527.6423

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_1g005730beta_vulgarisKMT2059155.555637.3984chondrus_crispusCDF3422152.564135.3846
BVRB_1g005730beta_vulgarisKMT2059167.479749.8645chlamydomonas_reinhardtiiPNW8374265.354348.294
BVRB_1g005730beta_vulgarisKMT2059178.590859.3496marchantia_polymorphaPTQ3258076.115557.4803
BVRB_1g005730beta_vulgarisKMT2059186.991979.6748theobroma_cacaoEOX9606072.134866.0674
BVRB_1g005730beta_vulgarisKMT2059188.617981.3008citrullus_lanatusCla97C05G082190.189.58982.1918
BVRB_1g005730beta_vulgarisKMT2059188.617982.6558ficus_caricaFCD_00028025-RA:cds91.086384.9582
BVRB_1g005730beta_vulgarisKMT2059189.430981.3008prunus_dulcisVVA1943590.41182.1918
BVRB_1g005730beta_vulgarisKMT2059140.650436.5854prunus_dulcisVVA1943683.333375
BVRB_1g005730beta_vulgarisKMT2059171.815762.8726oryza_longistaminataKN542184.1_FGP00377.034967.4419
BVRB_1g005730beta_vulgarisKMT2059175.880866.6667oryza_rufipogonORUFI01G47910.173.878664.9077
BVRB_1g005730beta_vulgarisKMT2059188.888980.7588lupinus_angustifoliusOIW0207289.373381.1989
BVRB_1g005730beta_vulgarisKMT2059174.525767.4797manihot_esculentaOAY6234079.02371.5517
BVRB_1g005730beta_vulgarisKMT2059186.991978.5908manihot_esculentaOAY4922288.67480.1105
BVRB_1g005730beta_vulgarisKMT2059144.715440.9214medicago_truncatulaKEH1896284.183777.0408
BVRB_1g005730beta_vulgarisKMT2059184.823875.6098medicago_truncatulaAET0210484.366675.2022
BVRB_1g005730beta_vulgarisKMT2059181.571874.7967ananas_comosusAco023410.1.mrna185.511478.4091
BVRB_1g005730beta_vulgarisKMT2059188.075980.7588cucumis_meloMELO3C006136.2.178.12571.6346
BVRB_1g005730beta_vulgarisKMT2059181.300871.5447oryza_glaberrimaORGLA01G0382300.182.644672.7273
BVRB_1g005730beta_vulgarisKMT2059181.300872.0867oryza_brachyanthaOB01G53640.181.743972.4796
BVRB_1g005730beta_vulgarisKMT2059188.346979.9458vigna_unguiculataVigun10g123500.1.v1.287.870679.5148
BVRB_1g005730beta_vulgarisKMT2059188.346980.2168glycine_maxKRH6513187.634479.5699
BVRB_1g005730beta_vulgarisKMT2059187.804979.4038glycine_maxKRH4822487.096878.7634
BVRB_1g005730beta_vulgarisKMT2059178.861870.4607vigna_radiataVradi09g04950.17567.0103
BVRB_1g005730beta_vulgarisKMT2059181.029871.5447triticum_turgidumTRITD3Av1G273510.284.463374.5763
BVRB_1g005730beta_vulgarisKMT2059183.739876.6938prunus_persicaONI2290189.825682.2674
BVRB_1g005730beta_vulgarisKMT2059188.888980.7588prunus_persicaONI2289889.86381.6438
BVRB_1g005730beta_vulgarisKMT2059157.994638.7534cyanidioschyzon_merolaeCMN250CT45.435230.3609
BVRB_1g005730beta_vulgarisKMT2059189.701981.3008quercus_lobataQL08p050136:mrna89.701981.3008
BVRB_1g005730beta_vulgarisKMT2059184.823876.6938ipomoea_trilobaitb09g23500.t184.823876.6938
BVRB_1g005730beta_vulgarisKMT2059188.346978.5908helianthus_annuusmRNA:HanXRQr2_Chr13g061876184.895875.5208
BVRB_1g005730beta_vulgarisKMT2059128.997324.6612helianthus_annuusmRNA:HanXRQr2_Chr05g020209180.451168.4211
BVRB_1g005730beta_vulgarisKMT2059173.170765.0406cynara_cardunculusKVH9115471.61863.6605
BVRB_1g005730beta_vulgarisKMT2059186.720979.9458populus_trichocarpaPotri.014G078800.2.v4.187.671280.8219
BVRB_1g005730beta_vulgarisKMT2059136.585433.6043populus_trichocarpaPotri.002G155400.2.v4.179.881773.3728
BVRB_1g005730beta_vulgarisKMT2059181.300871.5447oryza_indicaBGIOSGA000079-PA82.644672.7273
BVRB_1g005730beta_vulgarisKMT2059182.655872.3577lolium_perennecds.KYUSt_chr3.4620884.958274.3733
BVRB_1g005730beta_vulgarisKMT2059188.075978.5908pisum_sativumPsat4g153600.1.cds88.555979.0191
BVRB_1g005730beta_vulgarisKMT2059188.346978.0488brassica_junceacds.BjuA05g04870S88.828378.4741
BVRB_1g005730beta_vulgarisKMT2059188.617979.1328brassica_junceacds.BjuB06g53480S89.100879.564
BVRB_1g005730beta_vulgarisKMT2059187.262977.2358brassica_junceacds.BjuB01g49460S88.461578.2967
BVRB_1g005730beta_vulgarisKMT2059189.430978.3198brassica_junceacds.BjuA04g28370S89.430978.3198
BVRB_1g005730beta_vulgarisKMT2059179.132869.1057leersia_perrieriLPERR01G38900.282.719572.238
BVRB_1g005730beta_vulgarisKMT2059181.571872.3577setaria_viridisTKW1894383.611174.1667
BVRB_1g005730beta_vulgarisKMT2059178.048868.8347malus_domestica_goldenmRNA:MD01G003560087.009176.7372
BVRB_1g005730beta_vulgarisKMT2059125.474323.0352malus_domestica_goldenmRNA:MD07G010350087.03778.7037
BVRB_1g005730beta_vulgarisKMT2059148.238543.9024malus_domestica_goldenmRNA:MD07G010340072.064865.587
BVRB_1g005730beta_vulgarisKMT2059185.365976.6938quercus_subercds-POE77145.182.245473.8903
BVRB_1g005730beta_vulgarisKMT2059175.880866.6667oryza_nivaraONIVA01G50610.173.878664.9077
BVRB_1g005730beta_vulgarisKMT2059189.430981.5718citrus_clementinaESR5836988.709780.914
BVRB_1g005730beta_vulgarisKMT2059181.571872.3577setaria_italicaKQL0869083.611174.1667
BVRB_1g005730beta_vulgarisKMT2059187.804977.7778arabidopsis_hallerig09759.t188.524678.4153
BVRB_1g005730beta_vulgarisKMT2059183.197872.6287avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0003211.175.615866.0098
BVRB_1g005730beta_vulgarisKMT2059182.384872.6287avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0003777.184.210574.2382
BVRB_1g005730beta_vulgarisKMT2059182.655872.6287avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0003682.184.487574.2382
BVRB_1g005730beta_vulgarisKMT2059122.493217.8862asparagus_officinalisONK5503274.107158.9286
BVRB_1g005730beta_vulgarisKMT2059188.617981.3008eucalyptus_grandisKCW7167986.507979.3651
BVRB_1g005730beta_vulgarisKMT2059176.964862.3306selaginella_moellendorffiiEFJ2781085.285369.0691
BVRB_1g005730beta_vulgarisKMT2059176.964862.3306selaginella_moellendorffiiEFJ3685185.285369.0691
BVRB_1g005730beta_vulgarisKMT2059185.636979.4038fraxinus_excelsiorFRAEX38873_v2_000223570.2.cds84.946278.7634
BVRB_1g005730beta_vulgarisKMT2059179.403871.8157fraxinus_excelsiorFRAEX38873_v2_000286740.1.cds84.682176.5896
BVRB_1g005730beta_vulgarisKMT2059164.227654.7425aegilops_tauschiiAET3Gv21160900.768.299758.2133
BVRB_1g005730beta_vulgarisKMT2059175.880866.6667oryza_meridionalisOMERI01G41300.173.878664.9077
BVRB_1g005730beta_vulgarisKMT2059187.533977.5068amborella_trichopodaERN1932080.348371.1443
BVRB_1g005730beta_vulgarisKMT2059181.300871.5447sorghum_bicolorEES0425481.967272.1311
BVRB_1g005730beta_vulgarisKMT2059186.720979.1328corchorus_capsularisOMO7864087.193579.564
BVRB_1g005730beta_vulgarisKMT2059191.056984.5528chenopodium_quinoaAUR62022755-RA:cds92.817786.1878
BVRB_1g005730beta_vulgarisKMT2059191.056984.2818chenopodium_quinoaAUR62004305-RA:cds92.817785.9116
BVRB_1g005730beta_vulgarisKMT2059180.487871.5447juglans_regiacds.Jr12_03290_p185.590876.0807
BVRB_1g005730beta_vulgarisKMT2059189.159980.4878juglans_regiacds.Jr12_03260_p187.03778.5714
BVRB_1g005730beta_vulgarisKMT2059189.430980.7588juglans_regiacds.Jr12_03270_p189.918381.1989
BVRB_1g005730beta_vulgarisKMT2059122.493218.4282juglans_regiacds.Jr12_03280_p172.80759.6491
BVRB_1g005730beta_vulgarisKMT2059188.346978.0488brassica_oleraceaBo4g024970.188.828378.4741
BVRB_1g005730beta_vulgarisKMT2059188.346977.5068brassica_oleraceaBo4g195800.188.58777.7174
BVRB_1g005730beta_vulgarisKMT2059186.720978.8618coffea_canephoraCDP1975086.956579.0761
BVRB_1g005730beta_vulgarisKMT2059174.525766.1247digitaria_exilisDexi5B01G0039020.1:cds81.602472.4036
BVRB_1g005730beta_vulgarisKMT2059174.796766.1247digitaria_exilisDexi5A01G0039350.1:cds81.899172.4036
BVRB_1g005730beta_vulgarisKMT2059186.449979.1328cannabis_sativa_femalecds.evm.model.02.243591.40483.6676
BVRB_1g005730beta_vulgarisKMT2059181.029872.0867eragrostis_curvulaTVU3687983.286974.0947
BVRB_1g005730beta_vulgarisKMT2059180.487872.0867eragrostis_curvulaTVU3695282.729874.0947
BVRB_1g005730beta_vulgarisKMT2059188.346978.0488eutrema_salsugineumESQ3922989.07178.6885
BVRB_1g005730beta_vulgarisKMT2059182.655872.6287avena_sativa_sangAVESA.00010b.r2.4AG0650230.1.CDS84.487574.2382
BVRB_1g005730beta_vulgarisKMT2059182.384872.6287avena_sativa_sangAVESA.00010b.r2.4DG0789330.1.CDS74.509865.6863
BVRB_1g005730beta_vulgarisKMT2059182.655872.8997avena_sativa_sangAVESA.00010b.r2.4DG0777690.1.CDS84.487574.5152
BVRB_1g005730beta_vulgarisKMT2059120.867217.6152trifolium_pratenseTp57577_TGAC_v2_mRNA591572.641561.3208
BVRB_1g005730beta_vulgarisKMT2059180.758869.3767trifolium_pratenseTp57577_TGAC_v2_mRNA1015776.606765.8098
BVRB_1g005730beta_vulgarisKMT2059175.880866.6667oryza_barthiiOBART01G44440.173.878664.9077
BVRB_1g005730beta_vulgarisKMT2059187.804979.4038solanum_lycopersicumSolyc01g091580.3.188.043579.6196
BVRB_1g005730beta_vulgarisKMT2059182.926873.4417hordeum_vulgareHORVU.MOREX.r3.3HG0323030.186.197276.338
BVRB_1g005730beta_vulgarisKMT2059188.346979.1328vigna_angularisKOM5734787.870678.7062
BVRB_1g005730beta_vulgarisKMT2059184.823878.0488gossypium_raimondiiKJB4124480.670174.2268
BVRB_1g005730beta_vulgarisKMT2059181.571871.5447panicum_halliiPUZ5293383.611173.3333
BVRB_1g005730beta_vulgarisKMT2059188.617979.9458cajanus_cajanC.cajan_20681.t88.140279.5148
BVRB_1g005730beta_vulgarisKMT2059189.430977.7778brassica_rapa_ro18A04p040120.1_BraROA.189.430977.7778
BVRB_1g005730beta_vulgarisKMT2059188.888978.3198brassica_rapa_ro18A05p007030.1_BraROA.189.130478.5326
BVRB_1g005730beta_vulgarisKMT2059130.623326.0163rosa_chinensisPRQ5784776.351364.8649
BVRB_1g005730beta_vulgarisKMT2059149.864545.7995rosa_chinensisPRQ5784890.640483.2512
BVRB_1g005730beta_vulgarisKMT2059186.720977.5068rosa_chinensisPRQ5784581.632772.9592
BVRB_1g005730beta_vulgarisKMT2059187.533976.6938musa_acuminataMa11_p06770.277.45867.8657
BVRB_1g005730beta_vulgarisKMT2059189.972983.1978corymbia_citriodoracds-KAF8027005.186.91180.3665
BVRB_1g005730beta_vulgarisKMT2059181.029872.3577eragrostis_tefEt_3A_025912.CDS83.286974.3733
BVRB_1g005730beta_vulgarisKMT2059181.029872.0867eragrostis_tefEt_3B_030294.CDS83.286974.0947
BVRB_1g005730beta_vulgarisKMT2059173.712764.7696oryza_punctataOPUNC01G43430.282.175272.2054
BVRB_1g005730beta_vulgarisKMT2059186.720978.8618daucus_carotaKZM8807386.486578.6487
BVRB_1g005730beta_vulgarisKMT2059188.888981.8428pistacia_veracds-EVM0014517.189.373382.2888
BVRB_1g005730beta_vulgarisKMT2059188.888981.8428pistacia_veracds-EVM0024698.189.373382.2888
BVRB_1g005730beta_vulgarisKMT2059188.888981.8428pistacia_veracds-EVM0014247.189.373382.2888
BVRB_1g005730beta_vulgarisKMT2059181.029871.5447echinochloa_crusgalliscaffold184.106.cds83.055673.3333
BVRB_1g005730beta_vulgarisKMT2059181.300871.8157echinochloa_crusgalliscaffold78.355.cds83.333373.6111
BVRB_1g005730beta_vulgarisKMT2059147.696530.8943echinochloa_crusgalliscaffold79.152.cds36.288723.5052
BVRB_1g005730beta_vulgarisKMT2059181.300871.8157echinochloa_crusgalliscaffold151.93.cds83.333373.6111
BVRB_1g005730beta_vulgarisKMT2059181.842872.3577brachypodium_distachyonKQK1163183.888974.1667
BVRB_1g005730beta_vulgarisKMT2059187.804977.7778arabidopsis_lyratafgenesh2_kg.4__2775__AT2G45770.188.524678.4153
BVRB_1g005730beta_vulgarisKMT2059172.899763.4146triticum_dicoccoidesTRIDC3AG070970.483.281772.4458
BVRB_1g005730beta_vulgarisKMT2059178.861871.0027triticum_dicoccoidesTRIDC3BG080960.183.381175.0716
BVRB_1g005730beta_vulgarisKMT2059181.300871.5447oryza_sativaOs01t0958100-0182.644672.7273
BVRB_1g005730beta_vulgarisKMT2059153.929533.6043galdieria_sulphurariaEME2888552.23132.5459
BVRB_1g005730beta_vulgarisKMT2059187.262979.1328solanum_tuberosumPGSC0003DMT40007138487.579.3478
BVRB_1g005730beta_vulgarisKMT2059188.075978.0488arabidopsis_thalianaAT2G45770.188.797878.6885
BVRB_1g005730beta_vulgarisKMT2059180.758871.5447zea_maysZm00001eb140490_P00282.320472.9282
BVRB_1g005730beta_vulgarisKMT2059151.490547.6965actinidia_chinensisPSS2634295.477488.4422
BVRB_1g005730beta_vulgarisKMT2059185.907978.5908olea_europaeaOE9A012554C481.49174.5501
BVRB_1g005730beta_vulgarisKMT2059127.100323.5772olea_europaeaOE9A026772C184.033673.1092
BVRB_1g005730beta_vulgarisKMT2059186.178978.8618lactuca_sativacds-PLY77219.181.538574.6154
BVRB_1g005730beta_vulgarisKMT2059182.655873.1707triticum_aestivumTraesCSU02G058200.184.722275
BVRB_1g005730beta_vulgarisKMT2059182.384873.1707triticum_aestivumTraesCS3B02G561300.185.154175.6302
BVRB_1g005730beta_vulgarisKMT2059182.384872.8997triticum_aestivumTraesCS3A02G498300.184.679774.9304
BVRB_1g005730beta_vulgarisKMT2059188.617980.2168phaseolus_vulgarisESW0699588.140279.7844
BVRB_1g005730beta_vulgarisKMT2059188.617976.9648brassica_napusCDY2736089.100877.3842
BVRB_1g005730beta_vulgarisKMT2059188.888978.5908brassica_napusCDX7476589.130478.8043
BVRB_1g005730beta_vulgarisKMT2059188.888978.0488brassica_napusCDY3706489.130478.2609
BVRB_1g005730beta_vulgarisKMT2059188.617978.3198brassica_napusCDY1890190.581780.0554
BVRB_1g005730beta_vulgarisKMT2059188.075981.3008cucumis_sativusKGN5654188.315281.5217
BVRB_1g005730beta_vulgarisKMT2059187.804980.4878corylus_avellanaCav07g02230.t183.720976.7442
BVRB_1g005730beta_vulgarisKMT2059186.991979.1328capsicum_annuumPHT9344486.756878.9189
BVRB_1g005730beta_vulgarisKMT2059174.525765.0406oryza_glumipatulaOGLUM01G48750.172.944363.6605
BVRB_1g005730beta_vulgarisKMT2059149.593542.8184saccharum_spontaneumSspon.03G0037950-1P-mRNA-1:cds68.539359.176
BVRB_1g005730beta_vulgarisKMT2059187.262977.2358nymphaea_colorataNC9G0273540.1:cds84.293274.6073
BVRB_1g005730beta_vulgarisKMT2059188.075980.7588vitis_viniferaVitvi15g00845_P001.1.6037826b88.555981.1989
BVRB_1g005730beta_vulgarisKMT2059162.330644.9865ostreococcus_lucimarinusABO9731772.555252.3659
BVRB_1g005730beta_vulgarisKMT2059186.720977.2358camelina_sativaCsa05g003430.187.912178.2967
BVRB_1g005730beta_vulgarisKMT2059187.262978.0488camelina_sativaCsa04g064840.188.705279.3388
BVRB_1g005730beta_vulgarisKMT2059187.533977.7778camelina_sativaCsa06g052270.188.980779.0634
BVRB_1g005730beta_vulgarisKMT2059187.262980.4878sesamum_indicumSIN_1009927.t86.559179.8387
BVRB_1g005730beta_vulgarisKMT2059173.712756.3686chara_brauniiGBG7119428.274421.6216
BVRB_1g005730beta_vulgarisKMT2059177.235858.8076chara_brauniiGBG8732960.253745.8774
BVRB_1g005730beta_vulgarisKMT2059186.449978.8618kalanchoe_fedtschenkoiKaladp0015s0144.1.v1.187.637479.9451
BVRB_1g005730beta_vulgarisKMT2059163.414656.6396dioscorea_rotundataDRNTG_04072.279.054170.6081
BVRB_1g005730beta_vulgarisKMT2059180.758863.9566physcomitrium_patensPp3c17_14730V3.177.202161.1399
BVRB_1g005730beta_vulgarisKMT2059182.113873.1707secale_cerealeSECCE6Rv1G0433480.184.401175.2089
BVRB_1g005730beta_vulgarisKMT2059185.907976.1518papaver_somniferumRZC7293783.202173.7533
BVRB_1g005730beta_vulgarisKMT2059185.636976.6938papaver_somniferumRZC5744780.407172.0102

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression