RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	BRADI_4g16830v3	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Glutamyl-tRNA(Gln) amidotransferase subunit B, Primary root developmen
Status	Confidence	Length	6113 bases	Strand	Plus strand
Position	4 : 17690020 - 17696132	RNA binding domain	GatB_Yqey
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KQJ88290	GatB_Yqey	PF02637	4.2e-49	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KQJ88290	2850	547aa	KQJ88290

Gene Model

Click here to download BRADI_4g16830v3's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BRADI_4g16830v3's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BRADI_4g16830v3

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BRADI_4g16830v3

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression