Description

Ensembl ID BRADI_3g10160v3 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 5000 bases Strand Minus strand
Position 3 : 8311288 - 8316287 RNA binding domain PPR_3 , PRORP , PPR_long , PPR , RNase_Zc3h12a
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KQJ94371 PPR_3 PF13812 7.6e-06 1
KQJ94371 PRORP PF16953 8e-32 2
KQJ94371 PPR_long PF17177 1.2e-67 3
KQJ94371 PPR_long PF17177 1.2e-67 4
KQJ94371 PPR PF01535 4.1e-05 5
KQJ94371 PPR PF01535 4.1e-05 6
KQJ94366 PRORP PF16953 3.5e-71 1
KQJ94366 PPR_long PF17177 1.8e-67 2
KQJ94366 PPR_long PF17177 1.8e-67 3
KQJ94366 RNase_Zc3h12a PF11977 3.1e-05 4
KQJ94367 PRORP PF16953 3.5e-71 1
KQJ94367 PPR_long PF17177 1.8e-67 2
KQJ94367 PPR_long PF17177 1.8e-67 3
KQJ94367 RNase_Zc3h12a PF11977 3.1e-05 4
PNT66323 PRORP PF16953 4.3e-64 1
PNT66323 PPR_long PF17177 1.8e-67 2
PNT66323 PPR_long PF17177 1.8e-67 3
PNT66323 RNase_Zc3h12a PF11977 4.3e-05 4
PNT66324 PRORP PF16953 4.3e-64 1
PNT66324 PPR_long PF17177 1.8e-67 2
PNT66324 PPR_long PF17177 1.8e-67 3
PNT66324 RNase_Zc3h12a PF11977 4.3e-05 4
KQJ94365 PRORP PF16953 1.3e-58 1
KQJ94365 PPR_long PF17177 1.6e-67 2
KQJ94365 PPR_long PF17177 1.6e-67 3
KQJ94368 PRORP PF16953 1.3e-58 1
KQJ94368 PPR_long PF17177 1.6e-67 2
KQJ94368 PPR_long PF17177 1.6e-67 3
PNT66325 PRORP PF16953 1.2e-51 1
PNT66325 PPR_long PF17177 1.6e-67 2
PNT66325 PPR_long PF17177 1.6e-67 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PNT66325 2626 709aa PNT66325
- KQJ94365 2838 706aa KQJ94365
- PNT66323 2921 732aa PNT66323
- KQJ94368 2862 706aa KQJ94368
- PNT66324 2920 732aa PNT66324
- KQJ94366 2932 729aa KQJ94366
- KQJ94371 1908 635aa KQJ94371
- KQJ94367 2190 729aa KQJ94367

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BRADI_3g10160v3

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BRADI_3g10160v3

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression