RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	BRADI_2g54450v3	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	2309 bases	Strand	Plus strand
Position	2 : 53153212 - 53155520	RNA binding domain	Ribosomal_S8
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KQK10492	Ribosomal_S8	PF00410	1.3e-21	1
KQK10491	Ribosomal_S8	PF00410	6.3e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KQK10491	360	119aa	KQK10491
-	KQK10492	2111	130aa	KQK10492

Gene Model

Click here to download BRADI_2g54450v3's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BRADI_2g54450v3's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BRADI_2g54450v3

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BRADI_2g54450v3

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression