RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	B456_005G1677002	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	1675 bases	Strand	Plus strand
Position	5 : 49286442 - 49288116	RNA binding domain	RNA_pol_Rpb2_3 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KJB30918	RNA_pol_Rpb2_3	PF04565	2.6e-08	1
KJB30918	RNA_pol_Rpb2_2	PF04561	9e-05	2
KJB30918	RNA_pol_Rpb2_6	PF00562	6e-14	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KJB30918	881	255aa	KJB30918

Gene Model

Click here to download B456_005G1677002's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download B456_005G1677002's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
B456_005G1677002

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
B456_005G1677002

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression