RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | Al_scaffold_0008_612 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
Predicted protein (Fragment) |
Status |
Confidence |
Length |
1344 bases |
Strand |
Plus strand |
Position |
8 : 4016069 - 4017412 |
RNA binding domain |
Efg1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
Al_scaffold_0008_612 |
Efg1 |
PF10153 |
2.2e-17 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
Al_scaffold_0008_612 |
738 |
246aa |
Al_scaffold_0008_612 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Al_scaffold_0008_612 | arabidopsis_lyrata | fgenesh1_pg.C_scaffold_8000515 | 35.6725 | 33.3333 | arabidopsis_lyrata | Al_scaffold_0008_612 | 24.7967 | 23.1707 |
Al_scaffold_0008_612 | arabidopsis_lyrata | scaffold_800672.1 | 92.9936 | 90.4459 | arabidopsis_lyrata | Al_scaffold_0008_612 | 59.3496 | 57.7236 |
Al_scaffold_0008_612 | arabidopsis_lyrata | fgenesh2_kg.37__5__AT5G43720.1 | 75.6944 | 73.9583 | arabidopsis_lyrata | Al_scaffold_0008_612 | 88.6179 | 86.5854 |
Al_scaffold_0008_612 | arabidopsis_lyrata | fgenesh2_kg.1__353__AT1G04230.1 | 57.622 | 50.9146 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.8293 | 67.8862 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 62.6016 | 47.1545 | marchantia_polymorpha | PTQ46773 | 36.0656 | 27.1663 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 57.3171 | 41.0569 | papaver_somniferum | RZC49009 | 33.4123 | 23.9336 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.5772 | 63.4146 | cannabis_sativa_female | cds.novel_model_6294_5bd9a17a | 50.2778 | 43.3333 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.3902 | 64.6341 | ficus_carica | FCD_00009181-RA:cds | 54.142 | 47.0414 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 69.9187 | 56.5041 | beta_vulgaris | KMT12669 | 54.2587 | 43.8486 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.8293 | 64.2276 | cucumis_melo | MELO3C006479.2.1 | 51.0811 | 42.7027 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.8293 | 64.6341 | cucumis_sativus | KGN56919 | 56.5868 | 47.6048 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 63.4146 | populus_trichocarpa | Potri.010G078500.1.v4.1 | 53.1792 | 45.0867 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.2033 | 62.1951 | populus_trichocarpa | Potri.008G160800.1.v4.1 | 54.2522 | 44.868 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.8293 | 64.6341 | citrullus_lanatus | Cla97C05G085730.1 | 57.0997 | 48.0363 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 85.7724 | 82.9268 | arabidopsis_thaliana | AT5G43720.1 | 64.1337 | 62.0061 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.9837 | 63.0081 | prunus_dulcis | VVA33299 | 52.2989 | 44.5402 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 84.1463 | 80.4878 | brassica_napus | CDX94720 | 57.9832 | 55.4622 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 81.3008 | 76.0163 | brassica_napus | CDX96896 | 55.4017 | 51.8006 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 62.1951 | 57.7236 | brassica_napus | CDY68503 | 56.25 | 52.2059 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 84.1463 | 80.4878 | brassica_napus | CDY22337 | 59.4828 | 56.8966 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.9837 | 62.1951 | malus_domestica_golden | mRNA:MD16G0180700 | 52.6012 | 44.2197 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.4228 | 65.8537 | malus_domestica_golden | mRNA:MD13G0179700 | 53.5613 | 46.1538 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.9837 | 63.0081 | prunus_persica | ONI26470 | 52.2989 | 44.5402 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 84.5528 | 80.8943 | brassica_juncea | cds.BjuA06g01250S | 59.7701 | 57.1839 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 80.8943 | 76.4228 | brassica_juncea | cds.BjuA02g14060S | 55.5866 | 52.514 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 65.8537 | 55.2846 | cajanus_cajan | C.cajan_07124.t | 47.6471 | 40 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 70.7317 | 57.7236 | glycine_max | KRH34373 | 52.7273 | 43.0303 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.5447 | 58.9431 | glycine_max | KRG92432 | 64.7059 | 53.3088 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 70.7317 | 56.9106 | lupinus_angustifolius | OIW07245 | 46.7742 | 37.6344 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.5447 | 58.5366 | lupinus_angustifolius | OIW07765 | 49.4382 | 40.4494 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.9512 | 59.7561 | phaseolus_vulgaris | ESW15875 | 53.7994 | 44.6809 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.5447 | 60.1626 | vigna_angularis | KOM35584 | 50.8671 | 42.7746 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 68.2927 | 56.5041 | pisum_sativum | Psat6g114920.1.cds | 46.7967 | 38.7187 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 38.2114 | 32.1138 | vigna_radiata | Vradi08g14560.1 | 45.4106 | 38.1642 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.9512 | 60.1626 | vigna_unguiculata | Vigun07g170500.1.v1.2 | 53.6364 | 44.8485 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 64.2276 | solanum_lycopersicum | Solyc09g083270.3.1 | 50.2732 | 43.1694 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.2033 | 63.8211 | manihot_esculenta | OAY28037 | 54.4118 | 46.1765 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.6098 | 62.1951 | manihot_esculenta | OAY55652 | 54.7059 | 45 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.3902 | 63.0081 | capsicum_annuum | PHT85802 | 54.3027 | 45.9941 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 64.2276 | solanum_tuberosum | PGSC0003DMT400015608 | 53.0259 | 45.5331 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.9512 | 58.9431 | sesamum_indicum | SIN_1021842.t | 51.6035 | 42.2741 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 69.1057 | 57.7236 | lactuca_sativa | cds-PLY97186.1 | 48.2955 | 40.3409 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 69.5122 | 58.5366 | helianthus_annuus | mRNA:HanXRQr2_Chr12g0554231 | 50.8929 | 42.8571 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 72.7642 | 58.5366 | ananas_comosus | Aco017398.1.mrna1 | 55.2469 | 44.4444 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 68.6992 | 54.065 | asparagus_officinalis | ONK67371 | 52.4845 | 41.3043 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 72.7642 | 56.5041 | amborella_trichopoda | ERN01445 | 51.7341 | 40.1734 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.0163 | 64.6341 | vitis_vinifera | Vitvi05g00626_P001 | 55.4896 | 47.181 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.5772 | 65.4472 | ipomoea_triloba | itb13g18550.t2 | 53.3923 | 47.4926 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 61.3821 | 45.5285 | physcomitrium_patens | Pp3c2_37690V3.1 | 34.1629 | 25.3394 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.5772 | 61.7886 | gossypium_raimondii | KJB34520 | 52.6163 | 44.186 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.0163 | 65.0406 | gossypium_raimondii | KJB72309 | 53.7356 | 45.977 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.1707 | 62.1951 | prunus_avium | Pav_sc0000998.1_g170.1.mk:mrna | 51.7241 | 43.9655 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.5772 | 59.7561 | nicotiana_attenuata | OIS98846 | 15.0582 | 12.2296 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 72.7642 | 63.0081 | coffea_canephora | CDO99145 | 53.2738 | 46.131 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.0163 | 65.4472 | theobroma_cacao | EOY05872 | 51.9444 | 44.7222 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.3902 | 62.6016 | fraxinus_excelsior | FRAEX38873_v2_000188260.1.cds | 50.137 | 42.1918 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 69.1057 | 57.7236 | cynara_cardunculus | KVG61807 | 50 | 41.7647 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.2033 | 63.4146 | juglans_regia | cds.Jr12_15190_p1 | 55.3892 | 46.7066 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 63.0081 | juglans_regia | cds.Jr12_15180_p1 | 55.4217 | 46.6867 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.3902 | 64.2276 | pistacia_vera | cds-EVM0000561.1 | 54.6269 | 47.1642 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 83.7398 | 78.8618 | arabis_alpina | KFK31700 | 53.0928 | 50 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 63.8211 | eucalyptus_grandis | KCW60453 | 55.0898 | 47.006 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 65.0406 | 50.813 | chenopodium_quinoa | AUR62040390-RA:cds | 52.8053 | 41.2541 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.6098 | 66.2602 | citrus_clementina | ESR33329 | 55.3571 | 48.5119 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 84.9594 | 81.3008 | eutrema_salsugineum | ESQ44657 | 63.142 | 60.423 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 72.3577 | 59.3496 | dioscorea_rotundata | DRNTG_02508.1 | 54.2683 | 44.5122 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 64.2276 | corymbia_citriodora | cds-KAF8016410.1 | 55.2553 | 47.4474 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 70.7317 | 58.1301 | musa_acuminata | Ma08_p20360.1 | 54.0373 | 44.4099 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.0163 | 65.0406 | rosa_chinensis | PRQ32220 | 55.8209 | 47.7612 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 83.3333 | 79.2683 | brassica_oleracea | Bo7g065670.1 | 57.423 | 54.6218 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 80.8943 | 76.8293 | brassica_oleracea | Bo2g119410.1 | 61.4198 | 58.3333 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 63.4146 | quercus_lobata | QL06p015098:mrna | 53.9589 | 45.7478 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 76.0163 | 65.8537 | corchorus_capsularis | OMO54743 | 47.3418 | 41.0127 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 72.3577 | 59.3496 | kalanchoe_fedtschenkoi | Kaladp1006s0016.1.v1.1 | 53.4535 | 43.8438 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 88.6179 | 86.5854 | arabidopsis_halleri | g17562.t1 | 66.2614 | 64.7416 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 48.7805 | 30.0813 | ostreococcus_lucimarinus | ABO97201 | 40.5405 | 25 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 66.6667 | 54.878 | daucus_carota | KZM83141 | 52.5641 | 43.2692 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 71.5447 | 52.0325 | nymphaea_colorata | NC1G0108060.1:cds | 53.6585 | 39.0244 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 69.9187 | 52.439 | nymphaea_colorata | NC6G0040340.1:cds | 47.3829 | 35.5372 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 86.9919 | 82.5203 | camelina_sativa | Csa18g010150.1 | 65.0456 | 61.7021 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 86.9919 | 82.1138 | camelina_sativa | Csa11g071170.1 | 65.0456 | 61.3982 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 86.1789 | 81.7073 | camelina_sativa | Csa20g067650.1 | 64.4377 | 61.0942 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 60.1626 | 43.0894 | selaginella_moellendorffii | EFJ35460 | 42.6513 | 30.5476 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 84.5528 | 80.8943 | brassica_rapa_ro18 | A06p056630.1_BraROA.1 | 59.7701 | 57.1839 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 80.8943 | 76.4228 | brassica_rapa_ro18 | A02p040210.1_BraROA.1 | 59.7598 | 56.4565 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.3902 | 60.9756 | actinidia_chinensis | PSS01408 | 52.8902 | 43.3526 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 73.5772 | 62.6016 | actinidia_chinensis | PSS15976 | 52.3121 | 44.5087 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 63.8211 | olea_europaea | OE9A036261C1 | 53.6443 | 45.7726 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 74.7967 | 64.2276 | olea_europaea | OE9A084799C2 | 53.6443 | 46.0641 |
Al_scaffold_0008_612 | arabidopsis_lyrata | Al_scaffold_0008_612 | 75.2033 | 63.8211 | quercus_suber | cds-POF22596.1 | 48.0519 | 40.7792 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |