Description

Ensembl ID Aco016607.1.path1 Gene ID Accession -
Symbol Alias - Full Name
Status Confidence Length Strand
Position RNA binding domain Ribosomal_L5 , Ribosomal_L5_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Aco016607.1.mrna1 861 286aa Aco016607.1.mrna1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Aco016607.1.path1ananas_comosusAco012755.1.mrna147.513825.9669ananas_comosusAco016607.1.mrna130.069916.4336

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Aco016607.1.path1ananas_comosusAco016607.1.mrna145.454532.8671chondrus_crispusCCP3812372.222252.2222
Aco016607.1.path1ananas_comosusAco016607.1.mrna161.188847.5524marchantia_polymorphaPTQ5034060.975647.3868
Aco016607.1.path1ananas_comosusAco016607.1.mrna160.489544.7552physcomitrium_patensPp3c1_25850V3.163.837647.2325
Aco016607.1.path1ananas_comosusAco016607.1.mrna161.188845.4545physcomitrium_patensPp3c2_17110V3.164.338247.7941
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377662.5874beta_vulgarisKMT2041679.922869.112
Aco016607.1.path1ananas_comosusAco016607.1.mrna176.573463.986ficus_caricaFCD_00030358-RA:cds80.219867.033
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.475562.9371theobroma_cacaoEOX9587680.075267.6692
Aco016607.1.path1ananas_comosusAco016607.1.mrna177.272765.035papaver_somniferumRZC5714274.161162.4161
Aco016607.1.path1ananas_comosusAco016607.1.mrna177.272765.3846papaver_somniferumRZC7247081.851969.2593
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377661.5385cannabis_sativa_femalecds.evm.model.02.236478.409166.6667
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.825260.8392cucumis_meloMELO3C006088.2.178.966864.2066
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125961.5385citrullus_lanatusCla97C05G081650.178.228864.9446
Aco016607.1.path1ananas_comosusAco016607.1.mrna166.083954.5455cucumis_sativusKGN5649077.45963.9344
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02858.042arabidopsis_thalianaAT4G01310.178.62663.3588
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.482554.5455populus_trichocarpaPotri.014G089100.1.v4.173.664159.542
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.426661.5385populus_trichocarpaPotri.002G154600.1.v4.178.947466.1654
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678358.3916brassica_napusCDX7435477.651563.2576
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678358.3916brassica_napusCDX9188778.544163.9847
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02858.042brassica_napusCDY0719078.927263.6015
Aco016607.1.path1ananas_comosusAco016607.1.mrna165.03552.7972malus_domestica_goldenmRNA:MD01G005270071.264457.8544
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.328759.4406malus_domestica_goldenmRNA:MD07G010940058.452748.7106
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02857.6923brassica_junceacds.BjuB08g27380S78.927263.2184
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02858.042brassica_junceacds.BjuA09g71150S78.62663.3588
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97957.6923brassica_junceacds.BjuA03g31100S76.893962.5
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678360.1399prunus_dulcisVVA2363872.69560.9929
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.776261.1888cajanus_cajanC.cajan_18309.t77.859864.5756
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.727359.0909glycine_maxKRH4038777.902663.2959
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.076960.1399glycine_maxKRH0084478.277264.4195
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629460.1399phaseolus_vulgarisESW1178875.373164.1791
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377658.042medicago_truncatulaAES8027877.238861.9403
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02857.6923pisum_sativumPsat3g107160.1.cds75.735360.6618
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678360.1399prunus_persicaONI2321978.244365.6489
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377660.4895vigna_radiataVradi04g07030.173.665561.5658
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.328760.1399vigna_angularisKOM3707175.836463.9405
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02861.1888vigna_unguiculataVigun05g061400.1.v1.276.579965.0558
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125962.5874manihot_esculentaOAY6224580.30367.803
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.076961.8881solanum_lycopersicumSolyc09g007560.3.178.867966.7924
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.328759.7902sesamum_indicumSIN_1014103.t77.272764.7727
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.776261.8881solanum_tuberosumPGSC0003DMT40000439179.323366.5414
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.475561.5385helianthus_annuusmRNA:HanXRQr2_Chr06g024643181.297767.1756
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.776260.8392lactuca_sativacds-PLY64215.179.924265.9091
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125961.1888capsicum_annuumPHT6295278.228864.5756
Aco016607.1.path1ananas_comosusAco016607.1.mrna168.181857.6923avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0000986.171.691260.6618
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.482557.3427avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0002537.170.181859.6364
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.832256.993avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0003506.171.323559.9265
Aco016607.1.path1ananas_comosusAco016607.1.mrna168.181857.6923avena_sativa_sangAVESA.00010b.r2.4CG1272250.1.CDS71.691260.6618
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.832256.993avena_sativa_sangAVESA.00010b.r2.1DG0124860.1.CDS71.323559.9265
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.482557.3427avena_sativa_sangAVESA.00010b.r2.4AG0627640.1.CDS62.866553.4202
Aco016607.1.path1ananas_comosusAco016607.1.mrna154.545548.6014oryza_brachyanthaOB03G11920.178.787970.202
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_glaberrimaORGLA03G0017300.173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_nivaraONIVA03G01620.173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna168.531559.4406lolium_perennecds.KYUSt_chr4.5161272.058862.5
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.328760.8392oryza_punctataOPUNC03G01770.173.118362.3656
Aco016607.1.path1ananas_comosusAco016607.1.mrna169.580459.4406secale_cerealeSECCE5Rv1G0369880.172.101461.5942
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_rufipogonORUFI03G01710.173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna169.930159.7902setaria_italicaKQK9283971.684661.2903
Aco016607.1.path1ananas_comosusAco016607.1.mrna169.930159.7902setaria_viridisTKV9849271.684661.2903
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.7902triticum_turgidumTRITD4Bv1G193660.272.826161.9565
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.0909triticum_turgidumTRITD5Av1G244910.173.090961.4545
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.0909triticum_aestivumTraesCS5A02G513500.173.090961.4545
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.7902triticum_aestivumTraesCS4B02G344600.272.826161.9565
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.4406triticum_aestivumTraesCS4D02G339700.172.826161.5942
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377658.042trifolium_pratenseTp57577_TGAC_v2_mRNA2305976.102961.0294
Aco016607.1.path1ananas_comosusAco016607.1.mrna175.174864.3357vitis_viniferaVitvi15g01055_P00181.132169.434
Aco016607.1.path1ananas_comosusAco016607.1.mrna175.874165.7343amborella_trichopodaERM9648882.824471.7557
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97960.8392sorghum_bicolorKXG4029671.731461.4841
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.076961.5385coffea_canephoraCDP0877078.571466.1654
Aco016607.1.path1ananas_comosusAco016607.1.mrna177.272767.4825asparagus_officinalisONK7292970.158761.2698
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.776264.3357juglans_regiacds.Jr07_07410_p180.534370.229
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678359.4406prunus_aviumPav_sc0000254.1_g1240.1.mk:mrna78.244364.8855
Aco016607.1.path1ananas_comosusAco016607.1.mrna153.846246.1538dioscorea_rotundataDRNTG_18837.181.052669.4737
Aco016607.1.path1ananas_comosusAco016607.1.mrna176.573467.1329pistacia_veracds-EVM0006299.181.412671.3755
Aco016607.1.path1ananas_comosusAco016607.1.mrna176.573467.1329pistacia_veracds-EVM0031196.181.412671.3755
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_meridionalisOMERI03G01870.173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_glumipatulaOGLUM03G01940.160.47251.6224
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.5385saccharum_spontaneumSspon.01G0001460-2B-mRNA-1:cds62.553.6585
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125963.6364quercus_lobataQL04p055082:mrna80.608469.2015
Aco016607.1.path1ananas_comosusAco016607.1.mrna160.489548.2517cynara_cardunculusKVH8908377.232161.6071
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.727358.3916arabidopsis_lyratafgenesh2_kg.6__3575__AT4G01310.178.787963.2576
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377658.042arabidopsis_hallerig19722.t178.409162.8788
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_sativaOs03t0125000-0173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.727359.0909eutrema_salsugineumESQ3773278.490663.7736
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.727362.5874olea_europaeaOE9A095909C177.611966.791
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377661.5385olea_europaeaOE9A110949C177.528165.9176
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377660.8392ipomoea_trilobaitb04g00840.t177.528165.1685
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_indicaBGIOSGA011549-PA73.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.776262.2378corymbia_citriodoracds-KAF8017071.178.438766.171
Aco016607.1.path1ananas_comosusAco016607.1.mrna178.321771.3287nymphaea_colorataNC4G0046860.1:cds81.159473.913
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97961.5385echinochloa_crusgalliscaffold104.45.cds71.985862.4113
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.328762.2378echinochloa_crusgalliscaffold254.29.cds72.340463.1206
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629461.1888echinochloa_crusgalliscaffold52.229.cds71.631262.0567
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.426661.8881fraxinus_excelsiorFRAEX38873_v2_000140990.1.cds78.651766.2921
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377662.2378fraxinus_excelsiorFRAEX38873_v2_000245250.2.cds66.346257.0513
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629460.1399brachypodium_distachyonKQK2390472.661961.8705
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125961.8881actinidia_chinensisPSS2630980.91667.5573
Aco016607.1.path1ananas_comosusAco016607.1.mrna143.706330.0699cyanidioschyzon_merolaeCMV176CT70.621548.5876
Aco016607.1.path1ananas_comosusAco016607.1.mrna151.748339.8601selaginella_moellendorffiiEFJ3561782.222263.3333
Aco016607.1.path1ananas_comosusAco016607.1.mrna150.699338.4615selaginella_moellendorffiiEFJ2434971.782254.4554
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.1888oryza_barthiiOBART03G01950.173.476762.724
Aco016607.1.path1ananas_comosusAco016607.1.mrna175.524565.035citrus_clementinaESR5820380.898969.6629
Aco016607.1.path1ananas_comosusAco016607.1.mrna184.265778.3217musa_acuminataMa05_p22670.187.318881.1594
Aco016607.1.path1ananas_comosusAco016607.1.mrna180.069973.0769musa_acuminataMa11_p15870.179.790972.8223
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.076960.1399eucalyptus_grandisKCW7810978.867964.9057
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.8881chenopodium_quinoaAUR62004402-RA:cds79.457468.6047
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678361.8881chenopodium_quinoaAUR62022608-RA:cds79.457468.6047
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377658.7413camelina_sativaCsa02g001950.178.409163.6364
Aco016607.1.path1ananas_comosusAco016607.1.mrna167.832254.8951camelina_sativaCsa08g053660.182.203466.5254
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.426663.986quercus_subercds-POE83739.179.847969.5817
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377656.993arabis_alpinaKFK3071178.113261.5094
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97962.5874eragrostis_curvulaTVU4855273.285264.6209
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.125962.2378corchorus_capsularisOMO644048067.1698
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.4406triticum_urartuTuG1812G0500005243.01.T0173.090961.8182
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629460.8392digitaria_exilisDexi9B01G0048040.1:cds71.378161.4841
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629460.8392digitaria_exilisDexi9A01G0048610.1:cds71.378161.4841
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.7902triticum_dicoccoidesTRIDC4BG058000.172.563261.7329
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.279759.0909triticum_dicoccoidesTRIDC5AG073230.173.090961.4545
Aco016607.1.path1ananas_comosusAco016607.1.mrna169.930160.8392panicum_halliiPUZ4309371.684662.3656
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97960.4895zea_maysZm00001eb001840_P00171.731461.1307
Aco016607.1.path1ananas_comosusAco016607.1.mrna174.825261.1888kalanchoe_fedtschenkoiKaladp0081s0008.1.v1.182.307767.3077
Aco016607.1.path1ananas_comosusAco016607.1.mrna173.076961.8881gossypium_raimondiiKJB0971076.556864.8352
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629461.5385leersia_perrieriLPERR03G01770.172.661963.3094
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629462.2378eragrostis_tefEt_4B_036640.CDS67.558559.5318
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.97962.5874eragrostis_tefEt_4A_034936.CDS67.89359.8662
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.377659.7902daucus_carotaKZN0610779.615465.7692
Aco016607.1.path1ananas_comosusAco016607.1.mrna175.524563.986corylus_avellanaCav07g06030.t181.818269.3182
Aco016607.1.path1ananas_comosusAco016607.1.mrna172.02858.042brassica_oleraceaBo9g003560.178.927263.6015
Aco016607.1.path1ananas_comosusAco016607.1.mrna171.678358.3916brassica_oleraceaBo3g054560.178.544163.9847
Aco016607.1.path1ananas_comosusAco016607.1.mrna140.909124.8252saccharomyces_cerevisiaeYDR237W40.068524.3151
Aco016607.1.path1ananas_comosusAco016607.1.mrna170.629457.3427rosa_chinensisPRQ5826078.906264.0625

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression