RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Aco008281.1.path1	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	SERRATE_Ars2_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Aco008281.1.mrna1	1260	419aa	Aco008281.1.mrna1

Gene Model

Click here to download Aco008281.1.path1's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Aco008281.1.path1's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Aco008281.1.path1

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Aco008281.1.path1	ananas_comosus	Aco008281.1.mrna1	40.3341	23.6277	physcomitrium_patens	Pp3c11_5370V3.1	34.4196	20.1629
Aco008281.1.path1	ananas_comosus	Aco008281.1.mrna1	10.5012	8.11456	trifolium_pratense	Tp57577_TGAC_v2_mRNA22208	50.5747	39.0805
Aco008281.1.path1	ananas_comosus	Aco008281.1.mrna1	19.8091	13.8425	zea_mays	Zm00001eb107860_P001	49.1124	34.3195

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression