Description

Ensembl ID Aco001029.1.path1 Gene ID Accession -
Symbol Alias - Full Name
Status Confidence Length Strand
Position RNA binding domain Lactamase_B , Beta-Casp , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Aco001029.1.mrna1 2082 693aa Aco001029.1.mrna1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Aco001029.1.path1ananas_comosusAco001990.1.mrna129.411815.3846ananas_comosusAco001029.1.mrna128.138514.7186
Aco001029.1.path1ananas_comosusAco027573.1.mrna144.827626.4368ananas_comosusAco001029.1.mrna145.021626.5512
Aco001029.1.path1ananas_comosusAco010258.1.mrna131.351417.2973ananas_comosusAco001029.1.mrna133.477618.4704
Aco001029.1.path1ananas_comosusAco011421.1.mrna121.981810.82ananas_comosusAco001029.1.mrna127.849913.7085

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Aco001029.1.path1ananas_comosusAco001029.1.mrna139.971125.1082chondrus_crispusCDF3990351.775732.5234
Aco001029.1.path1ananas_comosusAco001029.1.mrna153.246836.5079chlamydomonas_reinhardtiiPNW862843624.6829
Aco001029.1.path1ananas_comosusAco001029.1.mrna163.780749.4949marchantia_polymorphaPTQ4375057.627144.7197
Aco001029.1.path1ananas_comosusAco001029.1.mrna166.81154.2569physcomitrium_patensPp3c5_16690V3.457.802746.9413
Aco001029.1.path1ananas_comosusAco001029.1.mrna163.347855.5556beta_vulgarisKMS9839083.460173.1939
Aco001029.1.path1ananas_comosusAco001029.1.mrna140.981232.6118ficus_caricaFCD_00025797-RA:cds56.913845.2906
Aco001029.1.path1ananas_comosusAco001029.1.mrna136.363633.9105ficus_caricaFCD_00025796-RA:cds91.970885.7664
Aco001029.1.path1ananas_comosusAco001029.1.mrna175.180466.3781theobroma_cacaoEOY0110379.299970.0152
Aco001029.1.path1ananas_comosusAco001029.1.mrna166.522456.9986papaver_somniferumRZC5797772.94362.5
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.737463.7807papaver_somniferumRZC6175475.368765.1917
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.593163.0592cannabis_sativa_femalecds.evm.model.04.14859.440650.9324
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.831258.8745citrullus_lanatusCla97C09G178390.177.687366.4495
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.593161.4719cucumis_sativusKGN6337975.443863.0177
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.408455.9885arabidopsis_thalianaAT2G01730.178.466663.2953
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.448864.6465populus_trichocarpaPotri.010G106200.1.v4.177.473468.1887
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.841356.5657brassica_napusCDY0942178.699263.7398
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.552756.71brassica_napusCDY6664278.37463.9024
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.881764.7908malus_domestica_goldenmRNA:MD16G001630077.224767.7225
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.264156.1328brassica_junceacds.BjuB04g45880S45.028136.4916
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.170365.2237prunus_dulcisVVA1459578.115568.693
Aco001029.1.path1ananas_comosusAco001029.1.mrna161.03953.5354cajanus_cajanC.cajan_42754.t83.928673.6111
Aco001029.1.path1ananas_comosusAco001029.1.mrna164.646556.9986glycine_maxKRH7035384.210574.2481
Aco001029.1.path1ananas_comosusAco001029.1.mrna123.665219.0476lupinus_angustifoliusOIW0195075.229460.5505
Aco001029.1.path1ananas_comosusAco001029.1.mrna126.984124.2424lupinus_angustifoliusOIW0194992.118282.7586
Aco001029.1.path1ananas_comosusAco001029.1.mrna165.36857.4315phaseolus_vulgarisESW2523084.357574.1155
Aco001029.1.path1ananas_comosusAco001029.1.mrna164.502256.1328medicago_truncatulaKEH4063083.707972.8464
Aco001029.1.path1ananas_comosusAco001029.1.mrna156.854350.7937pisum_sativumPsat6g046600.1.cds84.913875.8621
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.881765.0794prunus_persicaONI3183577.811668.541
Aco001029.1.path1ananas_comosusAco001029.1.mrna165.223757.1429vigna_radiataVradi08g00090.184.171373.743
Aco001029.1.path1ananas_comosusAco001029.1.mrna119.624817.8932vigna_angularisKOM338658577.5
Aco001029.1.path1ananas_comosusAco001029.1.mrna123.953819.4805vigna_angularisKOM3386873.127859.4714
Aco001029.1.path1ananas_comosusAco001029.1.mrna130.447325.974vigna_unguiculataVigunL078200.1.v1.276.727365.4545
Aco001029.1.path1ananas_comosusAco001029.1.mrna162.914955.4113vigna_unguiculataVigunL005900.3.v1.284.660274.5631
Aco001029.1.path1ananas_comosusAco001029.1.mrna164.790857.1429vigna_unguiculataVigun02g018800.1.v1.284.398574.4361
Aco001029.1.path1ananas_comosusAco001029.1.mrna127.561323.3766vigna_unguiculataVigunL001800.2.v1.275.494164.0316
Aco001029.1.path1ananas_comosusAco001029.1.mrna117.748914.1414vigna_unguiculataVigun01g000100.1.v1.268.715154.7486
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.304564.3579manihot_esculentaOAY2531056.381849.5006
Aco001029.1.path1ananas_comosusAco001029.1.mrna171.284359.596solanum_lycopersicumSolyc04g008030.2.176.117163.6364
Aco001029.1.path1ananas_comosusAco001029.1.mrna130.158722.2222sesamum_indicumSIN_1017021.t65.517248.2759
Aco001029.1.path1ananas_comosusAco001029.1.mrna131.601724.2424solanum_tuberosumPGSC0003DMT40007578862.215947.7273
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.160260.1732helianthus_annuusmRNA:HanXRQr2_Chr17g078003180.348766.0856
Aco001029.1.path1ananas_comosusAco001029.1.mrna172.727361.4719lactuca_sativacds-PLY75759.18067.619
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.552758.2973capsicum_annuumPHT8129375.077962.9283
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.831260.6061avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0002394.585.791475.5396
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.686960.4618avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0001935.285.765875.4955
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.965460.4618avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0001997.183.807874.5552
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.975560.7504avena_sativa_sangAVESA.00010b.r2.5AG0843530.1.CDS85.971275.7194
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.686960.4618avena_sativa_sangAVESA.00010b.r2.5DG0966220.1.CDS85.765875.4955
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.821160.4618avena_sativa_sangAVESA.00010b.r2.5CG0890870.1.CDS87.850578.3178
Aco001029.1.path1ananas_comosusAco001029.1.mrna164.790857.7201oryza_longistaminataKN539752.1_FGP00784.557475.3296
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.109760.3175oryza_brachyanthaOB09G16130.178.79869.783
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.7504oryza_glaberrimaORGLA09G0069700.184.794375.3131
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.099659.3074oryza_nivaraONIVA09G08360.169.819861.7117
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.831261.039lolium_perennecds.KYUSt_chr5.2922486.101176.3538
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542660.3175lolium_perennecds.KYUSt_chr5.2928276.985467.7472
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542660.8947oryza_punctataOPUNC09G07930.182.322473.1369
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.686961.3276secale_cerealeSECCE5Rv1G0326480.186.231976.9928
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.7504oryza_rufipogonORUFI09G10080.182.867173.6014
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.099659.8846setaria_italicaKQL2440482.887773.975
Aco001029.1.path1ananas_comosusAco001029.1.mrna157.864447.1861setaria_italicaKQL2440374.674160.8939
Aco001029.1.path1ananas_comosusAco001029.1.mrna156.7147.4747setaria_viridisTKW3302777.66865.0198
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.099659.8846setaria_viridisTKW3302882.887773.975
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542661.3276triticum_turgidumTRITD0Uv1G039660.685.125576.1649
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.686961.3276triticum_turgidumTRITD5Bv1G123850.182.210773.4024
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542661.3276triticum_aestivumTraesCS5A02G203800.186.050776.9928
Aco001029.1.path1ananas_comosusAco001029.1.mrna157.142951.3708triticum_aestivumTraesCS5B02G202500.186.274577.5599
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.831261.039triticum_aestivumTraesCS5D02G210400.186.41376.6304
Aco001029.1.path1ananas_comosusAco001029.1.mrna165.800958.0087trifolium_pratenseTp57577_TGAC_v2_mRNA3810685.875775.7062
Aco001029.1.path1ananas_comosusAco001029.1.mrna175.036164.5022vitis_viniferaVitvi01g04121_P00180.123368.8752
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.841358.5859amborella_trichopodaERM9588667.597856.7039
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.109759.4517sorghum_bicolorEES0108084.587873.8351
Aco001029.1.path1ananas_comosusAco001029.1.mrna171.428660.8947coffea_canephoraCDP1629176.50765.2241
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.160263.4921juglans_regiacds.Jr16_06630_p176.01265.967
Aco001029.1.path1ananas_comosusAco001029.1.mrna170.851462.1934juglans_regiacds.Jr16_06620_p178.434568.8498
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.737464.9351prunus_aviumPav_sc0000893.1_g390.1.mk:mrna50.99844.9102
Aco001029.1.path1ananas_comosusAco001029.1.mrna138.528133.0447dioscorea_rotundataDRNTG_24270.162.823553.8824
Aco001029.1.path1ananas_comosusAco001029.1.mrna175.901966.2338pistacia_veracds-EVM0006012.181.172870.8333
Aco001029.1.path1ananas_comosusAco001029.1.mrna124.53120.9235nicotiana_attenuataOIT2068289.005275.9162
Aco001029.1.path1ananas_comosusAco001029.1.mrna153.102544.1558nicotiana_attenuataOIT2068371.042559.0734
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.25460.4618oryza_glumipatulaOGLUM09G09610.178.181869.2562
Aco001029.1.path1ananas_comosusAco001029.1.mrna162.914954.8341saccharum_spontaneumSspon.03G0011380-2B-mRNA-1:cds82.419771.8336
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.821154.6898arabidopsis_lyratafgenesh1_pm.C_scaffold_500006057.387146.2759
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.552755.6999arabidopsis_hallerig14559.t178.501662.8665
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.7504oryza_sativaOs09t0397900-0184.794375.3131
Aco001029.1.path1ananas_comosusAco001029.1.mrna170.129956.4214eutrema_salsugineumESQ3314478.768263.3712
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.593162.6263olea_europaeaOE9A084405C179.069867.2868
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.160262.0491ipomoea_trilobaitb07g06450.t179.71767.6101
Aco001029.1.path1ananas_comosusAco001029.1.mrna158.297342.5685drosophila_melanogasterFBpp008484267.671749.4137
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.7504oryza_indicaBGIOSGA030716-PA84.794375.3131
Aco001029.1.path1ananas_comosusAco001029.1.mrna147.041843.0014corymbia_citriodoracds-KAF8021145.187.870680.3234
Aco001029.1.path1ananas_comosusAco001029.1.mrna128.138520.7792corymbia_citriodoracds-KAF8021143.160.185244.4444
Aco001029.1.path1ananas_comosusAco001029.1.mrna163.92553.6797nymphaea_colorataNC8G0214690.1:cds70.094958.8608
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542659.8846echinochloa_crusgalliscaffold87.242.cds84.821474.1071
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.3175echinochloa_crusgalliscaffold64.187.cds84.642974.6429
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542659.8846echinochloa_crusgalliscaffold275.59.cds84.821474.1071
Aco001029.1.path1ananas_comosusAco001029.1.mrna171.572960.3175fraxinus_excelsiorFRAEX38873_v2_000044830.1.cds75.957164.0123
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542660.1732brachypodium_distachyonKQJ9014882.752672.6481
Aco001029.1.path1ananas_comosusAco001029.1.mrna175.46964.7908actinidia_chinensisPSR8811781.718870.1562
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.109760.7504hordeum_vulgareHORVU.MOREX.r3.5HG0478980.185.352676.1302
Aco001029.1.path1ananas_comosusAco001029.1.mrna158.585948.4848selaginella_moellendorffiiEFJ2311678.5364.9903
Aco001029.1.path1ananas_comosusAco001029.1.mrna158.874548.4848selaginella_moellendorffiiEFJ2017478.160964.3678
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.398360.6061oryza_barthiiOBART09G09390.184.794375.1342
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.02663.4921citrus_clementinaESR6139979.411868.1115
Aco001029.1.path1ananas_comosusAco001029.1.mrna178.066468.3983musa_acuminataMa03_p07480.181.598871.4932
Aco001029.1.path1ananas_comosusAco001029.1.mrna162.193446.176chara_brauniiGBG6141039.577629.3848
Aco001029.1.path1ananas_comosusAco001029.1.mrna130.447320.0577galdieria_sulphurariaEME3258257.02737.5676
Aco001029.1.path1ananas_comosusAco001029.1.mrna172.871662.9149eucalyptus_grandisKCW6449677.81267.1803
Aco001029.1.path1ananas_comosusAco001029.1.mrna161.904849.6392camelina_sativaCsa09g003080.176.881761.6487
Aco001029.1.path1ananas_comosusAco001029.1.mrna171.284357.2872camelina_sativaCsa04g002940.128.990623.2981
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.532553.3911camelina_sativaCsa06g001660.174.522358.9172
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.02664.5022quercus_subercds-POE97861.179.411869.195
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.552755.8442arabis_alpinaKFK3339678.887163.3388
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.243958.7302eragrostis_curvulaTVU0947082.770972.2913
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.831261.039aegilops_tauschiiAET5Gv20498700.286.41376.6304
Aco001029.1.path1ananas_comosusAco001029.1.mrna161.760557.1429corchorus_capsularisOMO6070190.486383.7209
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542661.3276triticum_urartuTuG1812G0500002393.01.T0186.050776.9928
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.841356.5657brassica_rapa_ro18A02p046430.1_BraROA.178.699263.7398
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.532560.1732digitaria_exilisDexi2A01G0016970.1:cds81.675472.7749
Aco001029.1.path1ananas_comosusAco001029.1.mrna159.018850.2164digitaria_exilisDexi2B01G0015930.1:cds69.557859.1837
Aco001029.1.path1ananas_comosusAco001029.1.mrna142.857137.2294digitaria_exilisDexi2A01G0016950.1:cds81.818271.0744
Aco001029.1.path1ananas_comosusAco001029.1.mrna166.089559.1631digitaria_exilisDexi2B01G0015940.1:cds79.652271.3043
Aco001029.1.path1ananas_comosusAco001029.1.mrna158.585943.29ciona_savignyiENSCSAVP0000001245466.339949.0196
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.542661.3276triticum_dicoccoidesTRIDC5AG032900.386.050776.9928
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.686961.3276triticum_dicoccoidesTRIDC5BG034730.386.231976.9928
Aco001029.1.path1ananas_comosusAco001029.1.mrna168.25460.6061panicum_halliiPUZ7062684.464375
Aco001029.1.path1ananas_comosusAco001029.1.mrna155.122738.961caenorhabditis_elegansF10B5.8.162.828944.4079
Aco001029.1.path1ananas_comosusAco001029.1.mrna158.297341.9913homo_sapiensENSP0000041349367.333348.5
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.532558.2973zea_maysZm00001eb159740_P00483.87172.4014
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.02662.9149kalanchoe_fedtschenkoiKaladp1304s0007.1.v1.180.533868.4458
Aco001029.1.path1ananas_comosusAco001029.1.mrna143.867237.3737gossypium_raimondiiKJB7819072.38161.6667
Aco001029.1.path1ananas_comosusAco001029.1.mrna130.447327.7056gossypium_raimondiiKJB7818795.04586.4865
Aco001029.1.path1ananas_comosusAco001029.1.mrna161.183354.1126leersia_perrieriLPERR09G06440.183.464673.8189
Aco001029.1.path1ananas_comosusAco001029.1.mrna167.243958.8745eragrostis_tefEt_2B_020451.CDS83.214372.8571
Aco001029.1.path1ananas_comosusAco001029.1.mrna166.522458.8745eragrostis_tefEt_2A_016362.CDS84.587274.8624
Aco001029.1.path1ananas_comosusAco001029.1.mrna173.593163.3478daucus_carotaKZM8577578.220967.3313
Aco001029.1.path1ananas_comosusAco001029.1.mrna121.789319.4805corylus_avellanaCav04g09060.t189.349179.8817
Aco001029.1.path1ananas_comosusAco001029.1.mrna125.252519.9134corylus_avellanaCav04g09070.t161.619748.5915
Aco001029.1.path1ananas_comosusAco001029.1.mrna169.552756.71brassica_oleraceaBo2g134540.178.37463.9024
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.314664.7908rosa_chinensisPRQ4107575.072965.4519
Aco001029.1.path1ananas_comosusAco001029.1.mrna174.458964.9351rosa_chinensisPRQ4451680.499270.2028

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression