RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	AVESA.00001b.r3.4Cg0002850	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	SAP , RSB_motif
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	AVESA.00001b.r3.4Cg0002850.7	2962	281aa	cds.AVESA.00001b.r3.4Cg0002850.7
-	AVESA.00001b.r3.4Cg0002850.1	3201	754aa	cds.AVESA.00001b.r3.4Cg0002850.1
-	AVESA.00001b.r3.4Cg0002850.13	2634	404aa	cds.AVESA.00001b.r3.4Cg0002850.13
-	AVESA.00001b.r3.4Cg0002850.9	2813	738aa	cds.AVESA.00001b.r3.4Cg0002850.9
-	AVESA.00001b.r3.4Cg0002850.15	2869	853aa	cds.AVESA.00001b.r3.4Cg0002850.15
-	AVESA.00001b.r3.4Cg0002850.11	2962	738aa	cds.AVESA.00001b.r3.4Cg0002850.11
-	AVESA.00001b.r3.4Cg0002850.16	2559	693aa	cds.AVESA.00001b.r3.4Cg0002850.16
-	AVESA.00001b.r3.4Cg0002850.12	3634	548aa	cds.AVESA.00001b.r3.4Cg0002850.12
-	AVESA.00001b.r3.4Cg0002850.3	2836	404aa	cds.AVESA.00001b.r3.4Cg0002850.3
-	AVESA.00001b.r3.4Cg0002850.14	2541	172aa	cds.AVESA.00001b.r3.4Cg0002850.14
-	AVESA.00001b.r3.4Cg0002850.4	2657	345aa	cds.AVESA.00001b.r3.4Cg0002850.4
-	AVESA.00001b.r3.4Cg0002850.8	2790	172aa	cds.AVESA.00001b.r3.4Cg0002850.8
-	AVESA.00001b.r3.4Cg0002850.2	2585	172aa	cds.AVESA.00001b.r3.4Cg0002850.2
-	AVESA.00001b.r3.4Cg0002850.6	1302	309aa	cds.AVESA.00001b.r3.4Cg0002850.6
-	AVESA.00001b.r3.4Cg0002850.10	2726	172aa	cds.AVESA.00001b.r3.4Cg0002850.10
-	AVESA.00001b.r3.4Cg0002850.5	2727	404aa	cds.AVESA.00001b.r3.4Cg0002850.5

Gene Model

Click here to download AVESA.00001b.r3.4Cg0002850's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download AVESA.00001b.r3.4Cg0002850's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AVESA.00001b.r3.4Cg0002850

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AVESA.00001b.r3.4Cg0002850

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression