| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ATMG00520 | Gene ID |
|
Accession |
- |
| Symbol |
matR |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2019 bases |
Strand |
Minus strand |
| Position |
Mt : 144294 - 146312 |
RNA binding domain |
RVT_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ATMG00520 |
RVT_1 |
PF00078 |
2e-11 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| matR-201 |
ATMG00520 |
2019 |
672aa |
ATMG00520 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ATMG00520 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 50.744 | 44.1964 | papaver_somniferum | RZC84844 | 70.0205 | 60.9856 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 88.0952 | 85.8631 | populus_trichocarpa | Potri.007G062302.1.v4.1 | 91.4992 | 89.1808 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 69.3452 | 66.6667 | solanum_lycopersicum | Solyc11g056270.2.1 | 86.1368 | 82.8096 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 89.881 | 87.6488 | lupinus_angustifolius | OIW15546 | 65.9389 | 64.3013 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 53.5714 | 51.3393 | aegilops_tauschii | AET2Gv20759000.3 | 90.6801 | 86.9018 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 40.625 | 38.5417 | aegilops_tauschii | AET1Gv20533000.2 | 89.8026 | 85.1974 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 53.869 | 51.7857 | aegilops_tauschii | AET0Gv20078900.1 | 91.1839 | 87.6574 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 66.5179 | 63.3929 | triticum_urartu | TuG1812S0002540700.01.T01.s_cds32415 | 88.1657 | 84.0237 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 52.6786 | 51.0417 | fraxinus_excelsior | FRAEX38873_v2_000220180.1.cds1 | 92.1875 | 89.3229 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 82.5893 | 81.6964 | fraxinus_excelsior | FRAEX38873_v2_000400810.1.cds1 | 93.5919 | 92.5801 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1417080.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1415220.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1412830.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1420210.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 76.3393 | 71.7262 | avena_sativa_sang | AVESA.00010b.r2.UnG1427840.1.CDS.1 | 79.6584 | 74.8447 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1413000.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.1607 | 82.2917 | avena_sativa_sang | AVESA.00010b.r2.UnG1417090.1.CDS.1 | 88.5321 | 84.5566 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1417070.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1416520.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 86.3095 | 82.4405 | avena_sativa_sang | AVESA.00010b.r2.UnG1422180.1.CDS.1 | 88.685 | 84.7095 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 81.1012 | 75.8929 | musa_acuminata | mito8_p00050.1 | 82.9528 | 77.6256 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 87.6488 | 84.2262 | oryza_sativa | cds-BAC19891.1 | 86.8732 | 83.4808 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 83.9286 | 79.9107 | triticum_aestivum | TraesCS6B02G131400.1 | 85.9756 | 81.8598 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 68.6012 | 66.369 | helianthus_annuus | mRNA:HanXRQr2_Chr10g0436471 | 89.1683 | 86.2669 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 78.7202 | 73.9583 | oryza_punctata | OPUNC12G12610.1 | 82.6562 | 77.6562 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 85.7143 | 82.2917 | eragrostis_tef | Et_10A_001614.CDS | 82.1683 | 78.8873 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 25.2976 | 23.3631 | dioscorea_rotundata | DRNTG_29287.1 | 80.1887 | 74.0566 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 90.0298 | 88.0952 | chenopodium_quinoa | AUR62042345-RA:cds | 92.3664 | 90.3817 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 74.256 | 73.9583 | brassica_oleracea | Bo7g022990.1 | 95.7774 | 95.3935 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 84.2262 | 81.1012 | pistacia_vera | cds-EVM0011638.1 | 92.1824 | 88.7622 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 90.0298 | 88.3929 | daucus_carota | KZM81301 | 92.3664 | 90.687 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 31.5476 | 27.9762 | vitis_vinifera | Vitvi05g01032_P001 | 72.3549 | 64.1638 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 39.881 | 37.7976 | vitis_vinifera | Vitvi00g04177_P001 | 75.2809 | 71.3483 |
| ATMG00520 | arabidopsis_thaliana | ATMG00520.1 | 88.5417 | 87.2024 | vitis_vinifera | Vitvi00g04182_P001 | 91.1179 | 89.7397 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
