Description

Ensembl ID ATCG00640 Gene ID Accession -
Symbol rpl33 Alias - Full Name NA
Status Confidence Length 201 bases Strand Plus strand
Position Pt : 67488 - 67688 RNA binding domain Ribosomal_L33
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ATCG00640 Ribosomal_L33 PF00471 3e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
rpl33-201 ATCG00640 201 66aa ATCG00640

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ATCG00640

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ATCG00640arabidopsis_thalianaATCG00640.189.393981.8182populus_trichocarpaPotri.003G067400.1.v4.189.393981.8182
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485solanum_lycopersicumSolyc09g064410.1.1.192.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.175.757663.6364brachypodium_distachyonKQJ8842475.757663.6364
ATCG00640arabidopsis_thalianaATCG00640.178.787968.1818brachypodium_distachyonKQK1818378.787968.1818
ATCG00640arabidopsis_thalianaATCG00640.175.757666.6667brachypodium_distachyonKQK1274575.757666.6667
ATCG00640arabidopsis_thalianaATCG00640.192.424286.3636ananas_comosusAco020798.1.mrna155.454551.8182
ATCG00640arabidopsis_thalianaATCG00640.192.424286.3636ananas_comosusAco016793.1.mrna139.354836.7742
ATCG00640arabidopsis_thalianaATCG00640.196.969795.4545arabidopsis_lyratascaffold_201018.196.969795.4545
ATCG00640arabidopsis_thalianaATCG00640.198.484896.9697arabidopsis_lyratascaffold_201112.198.484896.9697
ATCG00640arabidopsis_thalianaATCG00640.174.242466.6667arabidopsis_lyratascaffold_501292.156.321850.5747
ATCG00640arabidopsis_thalianaATCG00640.190.909184.8485capsicum_annuumPHT5763690.909184.8485
ATCG00640arabidopsis_thalianaATCG00640.190.909183.3333capsicum_annuumPHT6556590.909183.3333
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485capsicum_annuumPHT6967792.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485capsicum_annuumPHT7308392.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485capsicum_annuumPHT8875192.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485capsicum_annuumPHT6968592.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.192.424284.8485capsicum_annuumPHT8113292.424284.8485
ATCG00640arabidopsis_thalianaATCG00640.190.909181.8182cajanus_cajanC.cajan_28960.t.cds190.909181.8182
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697glycine_maxKRH1343881.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818272.7273glycine_maxKRH2738481.818272.7273
ATCG00640arabidopsis_thalianaATCG00640.169.69759.0909cyanidioschyzon_merolaeCMV214CT74.193662.9032
ATCG00640arabidopsis_thalianaATCG00640.174.242465.1515aegilops_tauschiiAET4Gv20085400.174.242465.1515
ATCG00640arabidopsis_thalianaATCG00640.174.242463.6364aegilops_tauschiiAET1Gv20447900.175.384664.6154
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697aegilops_tauschiiAET5Gv20015100.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.178.787968.1818aegilops_tauschiiAET6Gv20855500.172.222262.5
ATCG00640arabidopsis_thalianaATCG00640.175.757666.6667aegilops_tauschiiAET2Gv20749800.175.757666.6667
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697aegilops_tauschiiAET4Gv20046000.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697aegilops_tauschiiAET2Gv20612400.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697aegilops_tauschiiAET3Gv20119100.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1506570.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1469200.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.UnG1490890.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1508880.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1490290.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.UnG1499550.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.UnG1448270.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.181.818268.1818avena_sativa_sangAVESA.00010b.r2.UnG1502310.1.CDS.181.818268.1818
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.UnG1505040.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1484720.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.2CG0283610.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.177.272763.6364avena_sativa_sangAVESA.00010b.r2.4CG1302670.1.CDS.177.272763.6364
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1517330.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1514580.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.174.242463.6364avena_sativa_sangAVESA.00010b.r2.7CG0677610.1.CDS.174.242463.6364
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1475870.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1465570.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.UnG1511950.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1478610.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.175.757665.1515avena_sativa_sangAVESA.00010b.r2.2DG0357850.1.CDS.175.757665.1515
ATCG00640arabidopsis_thalianaATCG00640.180.30368.1818avena_sativa_sangAVESA.00010b.r2.2CG0283600.1.CDS.180.30368.1818
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1469210.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.171.212157.5758avena_sativa_sangAVESA.00010b.r2.4DG0733610.1.CDS.173.437559.375
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1472580.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.181.818269.697avena_sativa_sangAVESA.00010b.r2.UnG1482340.1.CDS.181.818269.697
ATCG00640arabidopsis_thalianaATCG00640.183.333374.2424oryza_glaberrimaORGLA06G0240100.183.333374.2424
ATCG00640arabidopsis_thalianaATCG00640.183.333374.2424oryza_glaberrimaORGLA11G0192100.183.333374.2424
ATCG00640arabidopsis_thalianaATCG00640.183.333374.2424oryza_glaberrimaORGLA03G0399100.183.333374.2424
ATCG00640arabidopsis_thalianaATCG00640.183.333374.2424oryza_glaberrimaORGLA06G0269900.183.333374.2424
ATCG00640arabidopsis_thalianaATCG00640.183.333374.2424oryza_glaberrimaORGLA09G0177400.183.333374.2424
ATCG00640arabidopsis_thalianaATCG00640.172.727362.1212triticum_turgidumTRITD2Av1G022110.176.190565.0794
ATCG00640arabidopsis_thalianaATCG00640.177.272766.6667triticum_turgidumTRITD3Bv1G076210.177.272766.6667
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818triticum_turgidumTRITD7Bv1G093570.177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.174.242466.6667triticum_turgidumTRITD5Bv1G100870.174.242466.6667
ATCG00640arabidopsis_thalianaATCG00640.180.30371.2121panicum_halliiPUZ3957780.30371.2121
ATCG00640arabidopsis_thalianaATCG00640.180.30371.2121panicum_halliiPUZ7559680.30371.2121
ATCG00640arabidopsis_thalianaATCG00640.180.30372.7273panicum_halliiPUZ7255580.30372.7273
ATCG00640arabidopsis_thalianaATCG00640.168.181857.5758panicum_halliiPUZ6659473.770562.2951
ATCG00640arabidopsis_thalianaATCG00640.193.939484.8485citrus_clementinaESR4877393.939484.8485
ATCG00640arabidopsis_thalianaATCG00640.174.242465.1515triticum_aestivumTraesCS5D02G377100.1.cds174.242465.1515
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818triticum_aestivumTraesCS5D02G009500.1.cds177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818triticum_aestivumTraesCSU02G214000.1.cds177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697triticum_aestivumTraesCSU02G268900.1.cds178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697triticum_aestivumTraesCS1D02G295600.1.cds178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818triticum_aestivumTraesCS1D02G435300.1.cds177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.177.272766.6667triticum_aestivumTraesCS6D02G326200.1.cds177.272766.6667
ATCG00640arabidopsis_thalianaATCG00640.174.242466.6667triticum_aestivumTraesCS5B02G161400.1.cds174.242466.6667
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818triticum_aestivumTraesCSU02G261000.1.cds177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.171.212160.6061triticum_aestivumTraesCS2A02G089800.1.cds174.603263.4921
ATCG00640arabidopsis_thalianaATCG00640.174.242465.1515triticum_aestivumTraesCS4D02G043000.1.cds174.242465.1515
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697triticum_aestivumTraesCS3D02G053000.1.cds178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.177.272766.6667triticum_aestivumTraesCS7B02G184200.1.cds177.272766.6667
ATCG00640arabidopsis_thalianaATCG00640.175.757665.1515triticum_aestivumTraesCS1D02G171000.176.923166.1538
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697triticum_aestivumTraesCS2D02G271000.1.cds178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.174.242463.6364triticum_aestivumTraesCS3B02G187100.1.cds174.242463.6364
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818secale_cerealeSECCE1Rv1G0045610.1.CDS.177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697secale_cerealeSECCE5Rv1G0317240.1.CDS.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818secale_cerealeSECCE1Rv1G0040810.1.CDS.177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697secale_cerealeSECCEUnv1G0556310.1.CDS.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.177.272768.1818secale_cerealeSECCEUnv1G0534310.1.CDS.177.272768.1818
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697secale_cerealeSECCEUnv1G0560370.1.CDS.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.169.69762.1212gossypium_raimondiiKJB1028882.142973.2143
ATCG00640arabidopsis_thalianaATCG00640.184.848575.7576gossypium_raimondiiKJB4567860.215153.7634
ATCG00640arabidopsis_thalianaATCG00640.166.666763.6364gossypium_raimondiiKJB6615346.808544.6809
ATCG00640arabidopsis_thalianaATCG00640.192.424280.303helianthus_annuusCDS:HanXRQr2_Chr01g0017381.192.424280.303
ATCG00640arabidopsis_thalianaATCG00640.190.909180.303helianthus_annuusCDS:HanXRQr2_Chr11g0496361.190.909180.303
ATCG00640arabidopsis_thalianaATCG00640.189.393977.2727helianthus_annuusCDS:HanXRQr2_Chr01g0017631.189.393977.2727
ATCG00640arabidopsis_thalianaATCG00640.190.909178.7879helianthus_annuusCDS:HanXRQr2_Chr01g0023601.190.909178.7879
ATCG00640arabidopsis_thalianaATCG00640.178.787968.1818helianthus_annuusCDS:HanXRQr2_Chr16g0742151.157.142949.4506
ATCG00640arabidopsis_thalianaATCG00640.178.787972.7273eragrostis_tefEt_2B_019504.CDS178.787972.7273
ATCG00640arabidopsis_thalianaATCG00640.178.787972.7273eragrostis_tefEt_1A_005017.CDS178.787972.7273
ATCG00640arabidopsis_thalianaATCG00640.180.30366.6667medicago_truncatulaAET0265554.081644.898
ATCG00640arabidopsis_thalianaATCG00640.178.787968.1818triticum_dicoccoidesTRIDC4AG060330.178.787968.1818
ATCG00640arabidopsis_thalianaATCG00640.171.212160.6061triticum_dicoccoidesTRIDC2AG010260.174.603263.4921
ATCG00640arabidopsis_thalianaATCG00640.178.787969.697triticum_dicoccoidesTRIDC7BG029850.178.787969.697
ATCG00640arabidopsis_thalianaATCG00640.186.363678.7879kalanchoe_fedtschenkoiKaladp0060s0346.1.v1.1.CDS.186.363678.7879
ATCG00640arabidopsis_thalianaATCG00640.163.636451.5152trifolium_pratenseTp57577_TGAC_v2_mRNA356394032.381
ATCG00640arabidopsis_thalianaATCG00640.196.969795.4545brassica_oleraceaBo15489s010.110098.4375
ATCG00640arabidopsis_thalianaATCG00640.198.484896.9697brassica_napusCDY3625991.549390.1408
ATCG00640arabidopsis_thalianaATCG00640.110098.4848brassica_napusCDY2859110098.4848
ATCG00640arabidopsis_thalianaATCG00640.110098.4848brassica_napusCDY3370810098.4848
ATCG00640arabidopsis_thalianaATCG00640.192.424280.303daucus_carotaKZM8124392.424280.303
ATCG00640arabidopsis_thalianaATCG00640.193.939489.3939rosa_chinensisPRQ1569193.939489.3939
ATCG00640arabidopsis_thalianaATCG00640.189.393981.8182nymphaea_colorataNC2G0068580.1:cds45.384641.5385
ATCG00640arabidopsis_thalianaATCG00640.186.363680.303nymphaea_colorataNC4G0199630.1:cds20.141318.7279

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression