Description

Ensembl ID AT5G66470 Gene ID 836779 Accession -
Symbol AT5G66470 Alias - Full Name GTP-binding protein Era-like protein
Status Confidence Length 2798 bases Strand Minus strand
Position 5 : 26541562 - 26544359 RNA binding domain KH_2 , MMR_HSR1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT5G66470 KH_2 PF07650 8.5e-14 1
AT5G66470 KH_2 PF07650 8.5e-14 2
AT5G66470 MMR_HSR1 PF01926 2.6e-23 3
AT5G66470 MMR_HSR1 PF01926 2.6e-23 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT5G66470-202 AT5G66470 1593 427aa AT5G66470

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G66470arabidopsis_thalianaAT1G78010.120.357111.9643arabidopsis_thalianaAT5G66470.126.697915.6909
AT5G66470arabidopsis_thalianaAT3G12080.119.00459.2006arabidopsis_thalianaAT5G66470.129.508214.2857
AT5G66470arabidopsis_thalianaAT1G72960.114.96865.91195arabidopsis_thalianaAT5G66470.127.868911.007
AT5G66470arabidopsis_thalianaAT3G13870.115.2126.48379arabidopsis_thalianaAT5G66470.128.571412.178
AT5G66470arabidopsis_thalianaAT5G45160.114.38856.83453arabidopsis_thalianaAT5G66470.128.10313.3489
AT5G66470arabidopsis_thalianaAT5G58370.319.56999.03226arabidopsis_thalianaAT5G66470.121.31159.83607
AT5G66470arabidopsis_thalianaAT5G11480.127.358514.7799arabidopsis_thalianaAT5G66470.120.374711.007
AT5G66470arabidopsis_thalianaAT2G22870.129.666714.6667arabidopsis_thalianaAT5G66470.120.843110.3045
AT5G66470arabidopsis_thalianaAT5G39960.119.32378.69565arabidopsis_thalianaAT5G66470.128.10312.6464
AT5G66470arabidopsis_thalianaAT1G03160.111.95184.93421arabidopsis_thalianaAT5G66470.125.526910.5386
AT5G66470arabidopsis_thalianaAT1G30960.139.588120.3661arabidopsis_thalianaAT5G66470.140.515220.8431

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G66470arabidopsis_thalianaAT5G66470.141.217825.2927chondrus_crispusCDF3497346.808528.7234
AT5G66470arabidopsis_thalianaAT5G66470.154.566736.0656chlamydomonas_reinhardtiiPNW8761649.892932.9764
AT5G66470arabidopsis_thalianaAT5G66470.166.510550.5855marchantia_polymorphaPTQ3773063.820248.5393
AT5G66470arabidopsis_thalianaAT5G66470.177.283467.2131papaver_somniferumRZC5575377.102867.0561
AT5G66470arabidopsis_thalianaAT5G66470.177.283467.2131papaver_somniferumRZC5575477.102867.0561
AT5G66470arabidopsis_thalianaAT5G66470.174.004764.4028cannabis_sativa_femalecds.evm.model.04.204392.668680.6452
AT5G66470arabidopsis_thalianaAT5G66470.177.751867.4473ficus_caricaFCD_00008698-RA:cds69.022959.8753
AT5G66470arabidopsis_thalianaAT5G66470.176.81566.0422theobroma_cacaoEOX9103178.095267.1429
AT5G66470arabidopsis_thalianaAT5G66470.176.81566.0422beta_vulgarisKMT0944580.987769.6296
AT5G66470arabidopsis_thalianaAT5G66470.177.985968.6183cucumis_meloMELO3C016397.2.176.905367.6674
AT5G66470arabidopsis_thalianaAT5G66470.176.81567.2131cucumis_sativusKGN5329466.262657.9798
AT5G66470arabidopsis_thalianaAT5G66470.177.985966.7447populus_trichocarpaPotri.007G021900.1.v4.180.434868.8406
AT5G66470arabidopsis_thalianaAT5G66470.172.833761.5925solanum_lycopersicumSolyc02g077280.3.168.653458.0574
AT5G66470arabidopsis_thalianaAT5G66470.133.489516.3934caenorhabditis_elegansE02H1.2.136.294417.7665
AT5G66470arabidopsis_thalianaAT5G66470.177.985965.1054lactuca_sativacds-PLY62161.180.629567.3123
AT5G66470arabidopsis_thalianaAT5G66470.152.693236.534ostreococcus_lucimarinusABP0080564.102644.4444
AT5G66470arabidopsis_thalianaAT5G66470.175.64459.9532eragrostis_curvulaTVU2027573.744358.4475
AT5G66470arabidopsis_thalianaAT5G66470.178.688568.1499citrullus_lanatusCla97C07G135680.177.958267.5174
AT5G66470arabidopsis_thalianaAT5G66470.176.580862.7635vigna_radiataVradi07g00700.173.318460.0897
AT5G66470arabidopsis_thalianaAT5G66470.176.112462.7635amborella_trichopodaERM9464780.645266.5012
AT5G66470arabidopsis_thalianaAT5G66470.176.81563.2318vigna_unguiculataVigun03g264800.1.v1.277.541463.8298
AT5G66470arabidopsis_thalianaAT5G66470.176.112463.466phaseolus_vulgarisESW2806276.832264.0662
AT5G66470arabidopsis_thalianaAT5G66470.179.391165.1054asparagus_officinalisONK6803581.100566.5072
AT5G66470arabidopsis_thalianaAT5G66470.175.64461.3583pisum_sativumPsat4g094880.1.cds77.45862.8297
AT5G66470arabidopsis_thalianaAT5G66470.174.238957.6112brachypodium_distachyonKQK0481678.465360.8911
AT5G66470arabidopsis_thalianaAT5G66470.177.985966.9789quercus_subercds-POE45597.173.186862.8571
AT5G66470arabidopsis_thalianaAT5G66470.178.688565.5738ananas_comosusAco000610.1.mrna178.504765.4206
AT5G66470arabidopsis_thalianaAT5G66470.198.594897.6581arabidopsis_lyratafgenesh2_kg.8__2775__AT5G66470.198.594897.6581
AT5G66470arabidopsis_thalianaAT5G66470.178.454368.6183quercus_lobataQL06p047107:mrna78.454368.6183
AT5G66470arabidopsis_thalianaAT5G66470.174.941565.5738capsicum_annuumPHT8995866.252657.971
AT5G66470arabidopsis_thalianaAT5G66470.176.112464.8712lupinus_angustifoliusOIW2107380.845868.9055
AT5G66470arabidopsis_thalianaAT5G66470.193.676889.6955eutrema_salsugineumESQ3112693.240189.2774
AT5G66470arabidopsis_thalianaAT5G66470.199.531698.829arabidopsis_hallerig07221.t199.531698.829
AT5G66470arabidopsis_thalianaAT5G66470.178.220163.9344cajanus_cajanC.cajan_40806.t78.773664.3868
AT5G66470arabidopsis_thalianaAT5G66470.170.257663.466solanum_tuberosumPGSC0003DMT40005912482.191874.2466
AT5G66470arabidopsis_thalianaAT5G66470.173.770559.0164setaria_viridisTKW2583476.08760.8696
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.4848oryza_nivaraONIVA05G28000.175.177360.0473
AT5G66470arabidopsis_thalianaAT5G66470.178.220166.5105ipomoea_trilobaitb05g24900.t174.887963.6771
AT5G66470arabidopsis_thalianaAT5G66470.174.238959.2506oryza_glumipatulaOGLUM05G27720.174.940959.8109
AT5G66470arabidopsis_thalianaAT5G66470.174.941559.9532zea_maysZm00001eb343970_P00276.923161.5385
AT5G66470arabidopsis_thalianaAT5G66470.174.707365.5738sesamum_indicumSIN_1022205.t74.35965.2681
AT5G66470arabidopsis_thalianaAT5G66470.173.067958.548lolium_perennecds.KYUSt_chr1.4050077.03761.7284
AT5G66470arabidopsis_thalianaAT5G66470.160.889942.3888chara_brauniiGBG6136153.941937.5519
AT5G66470arabidopsis_thalianaAT5G66470.193.442689.4614arabis_alpinaKFK2832294.103890.0943
AT5G66470arabidopsis_thalianaAT5G66470.173.536359.0164oryza_brachyanthaOB05G33600.176.585461.4634
AT5G66470arabidopsis_thalianaAT5G66470.174.238962.2951glycine_maxKRH6988175.296963.1829
AT5G66470arabidopsis_thalianaAT5G66470.176.112462.9977glycine_maxKRH0818575.934662.8505
AT5G66470arabidopsis_thalianaAT5G66470.143.091323.185cyanidioschyzon_merolaeCMN201CT48.041825.8486
AT5G66470arabidopsis_thalianaAT5G66470.177.283467.9157corymbia_citriodoracds-KAF7850167.177.830268.3962
AT5G66470arabidopsis_thalianaAT5G66470.173.302158.3138aegilops_tauschiiAET1Gv20967800.274.880459.5694
AT5G66470arabidopsis_thalianaAT5G66470.173.067958.0796triticum_urartuTuG1812G0100004418.01.T0177.805561.8454
AT5G66470arabidopsis_thalianaAT5G66470.171.662858.548oryza_longistaminataKN539957.1_FGP00484.297568.8705
AT5G66470arabidopsis_thalianaAT5G66470.176.346665.808fraxinus_excelsiorFRAEX38873_v2_000302070.2.cds67.916758.5417
AT5G66470arabidopsis_thalianaAT5G66470.174.941559.0164avena_sativa_sangAVESA.00010b.r2.1DG0154640.1.CDS79.012362.2222
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.2506avena_sativa_sangAVESA.00010b.r2.1AG0035520.1.CDS78.518562.4691
AT5G66470arabidopsis_thalianaAT5G66470.174.004758.7822avena_sativa_sangAVESA.00010b.r2.1AG0003880.1.CDS78.411962.2829
AT5G66470arabidopsis_thalianaAT5G66470.175.878264.637musa_acuminataMa09_p06680.175.878264.637
AT5G66470arabidopsis_thalianaAT5G66470.173.770559.2506oryza_glaberrimaORGLA05G0225800.177.777862.4691
AT5G66470arabidopsis_thalianaAT5G66470.174.238958.548hordeum_vulgareHORVU.MOREX.r3.1HG0089580.179.2562.5
AT5G66470arabidopsis_thalianaAT5G66470.146.135836.0656triticum_turgidumTRITD1Av1G208660.278.861.6
AT5G66470arabidopsis_thalianaAT5G66470.142.857133.2553triticum_turgidumTRITD1Bv1G216180.190.147869.9507
AT5G66470arabidopsis_thalianaAT5G66470.174.004760.6557panicum_halliiPUZ6474775.961562.2596
AT5G66470arabidopsis_thalianaAT5G66470.173.536359.9532echinochloa_crusgalliscaffold13.900.cds74.761960.9524
AT5G66470arabidopsis_thalianaAT5G66470.174.238960.4215echinochloa_crusgalliscaffold1.252.cds74.588260.7059
AT5G66470arabidopsis_thalianaAT5G66470.173.770560.8899echinochloa_crusgalliscaffold40.127.cds75.358862.201
AT5G66470arabidopsis_thalianaAT5G66470.177.517666.9789actinidia_chinensisPSS3649374.886964.7059
AT5G66470arabidopsis_thalianaAT5G66470.177.985966.7447citrus_clementinaESR3887480.629569.0073
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.4848oryza_indicaBGIOSGA017546-PA75.177360.0473
AT5G66470arabidopsis_thalianaAT5G66470.159.250646.8384selaginella_moellendorffiiEFJ1488076.666760.6061
AT5G66470arabidopsis_thalianaAT5G66470.159.250647.0726selaginella_moellendorffiiEFJ3834076.666760.9091
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.4848oryza_sativaOs05t0567300-0275.177360.0473
AT5G66470arabidopsis_thalianaAT5G66470.140.983624.1218homo_sapiensENSP0000025492840.045823.5698
AT5G66470arabidopsis_thalianaAT5G66470.173.302158.3138triticum_aestivumTraesCS1D02G412600.177.667561.7866
AT5G66470arabidopsis_thalianaAT5G66470.172.599557.6112triticum_aestivumTraesCS1B02G434400.178.085661.9647
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.4848oryza_rufipogonORUFI05G27990.175.177360.0473
AT5G66470arabidopsis_thalianaAT5G66470.173.067958.3138secale_cerealeSECCE1Rv1G0058480.177.419461.7866
AT5G66470arabidopsis_thalianaAT5G66470.179.156968.8525gossypium_raimondiiKJB7102980.094869.6682
AT5G66470arabidopsis_thalianaAT5G66470.175.64464.1686helianthus_annuusmRNA:HanXRQr2_Chr14g064213180.348368.1592
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.4848oryza_punctataOPUNC05G23700.174.299159.3458
AT5G66470arabidopsis_thalianaAT5G66470.169.789254.5667eragrostis_tefEt_9B_064889.CDS73.039257.1078
AT5G66470arabidopsis_thalianaAT5G66470.174.707359.4848eragrostis_tefEt_9A_062343.CDS75.235859.9057
AT5G66470arabidopsis_thalianaAT5G66470.175.878261.1241medicago_truncatulaKEH2041768.498955.1797
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.2506saccharum_spontaneumSspon.07G0021610-2D-mRNA-1:cds75.714360.2381
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.0164saccharum_spontaneumSspon.07G0021610-1P-mRNA-1:cds75.714360
AT5G66470arabidopsis_thalianaAT5G66470.174.473159.0164saccharum_spontaneumSspon.07G0021610-2P-mRNA-1:cds75.714360
AT5G66470arabidopsis_thalianaAT5G66470.174.238959.0164sorghum_bicolorOQU7843070.288255.8758
AT5G66470arabidopsis_thalianaAT5G66470.122.716617.7986sorghum_bicolorOQU7617167.832253.1469
AT5G66470arabidopsis_thalianaAT5G66470.173.067958.0796triticum_dicoccoidesTRIDC1AG059660.772.222257.4074
AT5G66470arabidopsis_thalianaAT5G66470.168.852552.9274triticum_dicoccoidesTRIDC1BG068130.271.186454.7215
AT5G66470arabidopsis_thalianaAT5G66470.177.751867.2131coffea_canephoraCDP0199072.647762.8009
AT5G66470arabidopsis_thalianaAT5G66470.179.391166.7447manihot_esculentaOAY5743481.29568.3453
AT5G66470arabidopsis_thalianaAT5G66470.177.985966.9789kalanchoe_fedtschenkoiKaladp0062s0112.1.v1.177.262266.3573
AT5G66470arabidopsis_thalianaAT5G66470.177.751866.7447kalanchoe_fedtschenkoiKaladp0067s0086.1.v1.177.389366.4336
AT5G66470arabidopsis_thalianaAT5G66470.174.707362.0609trifolium_pratenseTp57577_TGAC_v2_mRNA2493576.315863.3971
AT5G66470arabidopsis_thalianaAT5G66470.192.7488.0562brassica_rapa_ro18A09p010980.1_BraROA.191.45586.836
AT5G66470arabidopsis_thalianaAT5G66470.178.220168.1499eucalyptus_grandisKCW5672476.430266.5904
AT5G66470arabidopsis_thalianaAT5G66470.173.536361.8267dioscorea_rotundataDRNTG_12312.176.772664.5477
AT5G66470arabidopsis_thalianaAT5G66470.179.625367.6815prunus_persicaONH9689378.160966.4368
AT5G66470arabidopsis_thalianaAT5G66470.150.585540.9836avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0002056.191.525474.1525
AT5G66470arabidopsis_thalianaAT5G66470.174.238959.0164avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0003573.176.5760.8696
AT5G66470arabidopsis_thalianaAT5G66470.171.428663.466chenopodium_quinoaAUR62004085-RA:cds91.317481.1377
AT5G66470arabidopsis_thalianaAT5G66470.170.960263.7002chenopodium_quinoaAUR62007597-RA:cds90.718681.4371
AT5G66470arabidopsis_thalianaAT5G66470.173.302158.548digitaria_exilisDexi3B01G0016550.1:cds76.341560.9756
AT5G66470arabidopsis_thalianaAT5G66470.173.536358.7822digitaria_exilisDexi3A01G0016210.1:cds76.772661.3692
AT5G66470arabidopsis_thalianaAT5G66470.174.238959.4848oryza_barthiiOBART05G26100.174.940960.0473
AT5G66470arabidopsis_thalianaAT5G66470.182.435676.3466brassica_oleraceaBo7g064910.188.220681.7043
AT5G66470arabidopsis_thalianaAT5G66470.189.929784.0749brassica_oleraceaBo9g021920.146.209443.201
AT5G66470arabidopsis_thalianaAT5G66470.179.391167.4473prunus_dulcisVVA0976277.574465.9039
AT5G66470arabidopsis_thalianaAT5G66470.143.091323.185galdieria_sulphurariaEME3002647.179525.3846
AT5G66470arabidopsis_thalianaAT5G66470.178.220167.4473corylus_avellanaCav07g00650.t178.220167.4473
AT5G66470arabidopsis_thalianaAT5G66470.174.707359.4848leersia_perrieriLPERR05G21730.175.952460.4762
AT5G66470arabidopsis_thalianaAT5G66470.176.580866.2763nicotiana_attenuataOIT0377476.046565.814
AT5G66470arabidopsis_thalianaAT5G66470.174.941566.0422olea_europaeaOE9A047733C273.226564.5309
AT5G66470arabidopsis_thalianaAT5G66470.177.517666.0422olea_europaeaOE9A100453C175.743764.5309
AT5G66470arabidopsis_thalianaAT5G66470.178.688567.2131pistacia_veracds-EVM0030723.179.245367.6887
AT5G66470arabidopsis_thalianaAT5G66470.134.426217.7986drosophila_melanogasterFBpp008216339.410220.3753
AT5G66470arabidopsis_thalianaAT5G66470.190.398185.0117brassica_napusCDX8139256.681453.304
AT5G66470arabidopsis_thalianaAT5G66470.191.803385.9485brassica_napusCDY3077590.740784.9537
AT5G66470arabidopsis_thalianaAT5G66470.192.7487.822brassica_napusCDY1860786.652182.0569
AT5G66470arabidopsis_thalianaAT5G66470.190.163984.7775brassica_napusCDY4523289.120483.7963
AT5G66470arabidopsis_thalianaAT5G66470.178.688568.1499corchorus_capsularisOMO5693078.873268.3099
AT5G66470arabidopsis_thalianaAT5G66470.174.004759.4848oryza_meridionalisOMERI03G30170.174.352959.7647
AT5G66470arabidopsis_thalianaAT5G66470.192.271788.993camelina_sativaCsa02g076320.192.271788.993
AT5G66470arabidopsis_thalianaAT5G66470.193.676891.3349camelina_sativaCsa11g104520.193.896791.5493
AT5G66470arabidopsis_thalianaAT5G66470.194.379490.6323camelina_sativaCsa18g042100.194.379490.6323
AT5G66470arabidopsis_thalianaAT5G66470.177.517665.3396malus_domestica_goldenmRNA:MD02G012280069.831258.8608
AT5G66470arabidopsis_thalianaAT5G66470.179.859566.5105malus_domestica_goldenmRNA:MD15G022560079.487266.2005
AT5G66470arabidopsis_thalianaAT5G66470.179.625368.8525rosa_chinensisPRQ4755881.145670.1671
AT5G66470arabidopsis_thalianaAT5G66470.158.54851.7564juglans_regiacds.Jr12_02480_p192.936882.1561
AT5G66470arabidopsis_thalianaAT5G66470.175.878264.1686nymphaea_colorataNC2G0287960.1:cds76.959665.0831
AT5G66470arabidopsis_thalianaAT5G66470.176.580863.2318vigna_angularisKOM3227872.505559.867
AT5G66470arabidopsis_thalianaAT5G66470.173.770559.0164setaria_italicaKQL1427676.08760.8696
AT5G66470arabidopsis_thalianaAT5G66470.164.63750.5855physcomitrium_patensPp3c26_7390V3.165.558251.3064
AT5G66470arabidopsis_thalianaAT5G66470.177.751869.555vitis_viniferaVitvi04g01332_P00176.321868.2759
AT5G66470arabidopsis_thalianaAT5G66470.170.023458.7822cynara_cardunculusKVI0881879.100566.4021

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003729enables mRNA binding1IDAArabidopsis_thaliana(3702)Function
GO:0006364involved_in rRNA processing1ISSArabidopsis_thaliana(3702)Process
GO:0009507located_in chloroplast2HDA,ISMArabidopsis_thaliana(3702)Component
GO:0042254involved_in ribosome biogenesis1ISSArabidopsis_thaliana(3702)Process
GO:0042644located_in chloroplast nucleoid1ISSArabidopsis_thaliana(3702)Component

Expression