Description

Ensembl ID AT5G53770 Gene ID 835458 Accession -
Symbol AT5G53770 Alias - Full Name Nucleotidyltransferase family protein
Status Confidence Length 3436 bases Strand Plus strand
Position 5 : 21826656 - 21830091 RNA binding domain PAP_assoc
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT5G53770 PAP_assoc PF03828 1.5e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT5G53770-201 AT5G53770 1903 530aa AT5G53770

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G53770arabidopsis_thalianaAT3G51620.219.179710.9771arabidopsis_thalianaAT5G53770.13017.1698
AT5G53770arabidopsis_thalianaAT3G56320.122.553913.267arabidopsis_thalianaAT5G53770.125.660415.0943
AT5G53770arabidopsis_thalianaAT3G61690.112.73987.06063arabidopsis_thalianaAT5G53770.131.320817.3585
AT5G53770arabidopsis_thalianaAT2G40520.426.693215.5378arabidopsis_thalianaAT5G53770.125.28314.717
AT5G53770arabidopsis_thalianaAT4G00060.313.30187.76502arabidopsis_thalianaAT5G53770.137.169821.6981

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G53770arabidopsis_thalianaAT5G53770.143.018926.6038chondrus_crispusCDF3867724.30715.032
AT5G53770arabidopsis_thalianaAT5G53770.151.698134.1509chlamydomonas_reinhardtiiPNW7046224.5316.2041
AT5G53770arabidopsis_thalianaAT5G53770.157.358540.566marchantia_polymorphaPTQ4799238.924527.5288
AT5G53770arabidopsis_thalianaAT5G53770.115.849112.2642papaver_somniferumRZC8065837.168128.7611
AT5G53770arabidopsis_thalianaAT5G53770.165.094354.1509ficus_caricaFCD_00020334-RA:cds62.274451.8051
AT5G53770arabidopsis_thalianaAT5G53770.167.735856.2264theobroma_cacaoEOY1298466.358655.0832
AT5G53770arabidopsis_thalianaAT5G53770.166.981154.5283beta_vulgarisKMT1306669.335956.4453
AT5G53770arabidopsis_thalianaAT5G53770.166.603853.5849cucumis_meloMELO3C016705.2.164.65252.0147
AT5G53770arabidopsis_thalianaAT5G53770.167.735854.5283cucumis_sativusKGN5513465.992653.125
AT5G53770arabidopsis_thalianaAT5G53770.167.358555.0943populus_trichocarpaPotri.001G400800.1.v4.165.745953.7753
AT5G53770arabidopsis_thalianaAT5G53770.167.358553.3962solanum_lycopersicumSolyc10g006990.3.145.652236.1893
AT5G53770arabidopsis_thalianaAT5G53770.131.886817.9245caenorhabditis_elegansZK858.1.12011.2426
AT5G53770arabidopsis_thalianaAT5G53770.166.603855.6604lactuca_sativacds-PLY87006.168.67757.393
AT5G53770arabidopsis_thalianaAT5G53770.138.490627.7358ostreococcus_lucimarinusABO9715458.789642.3631
AT5G53770arabidopsis_thalianaAT5G53770.161.320846.4151eragrostis_curvulaTVU3556651.42438.924
AT5G53770arabidopsis_thalianaAT5G53770.161.886846.4151eragrostis_curvulaTVU3559751.898738.924
AT5G53770arabidopsis_thalianaAT5G53770.166.981154.3396citrullus_lanatusCla97C11G224200.165.619253.2347
AT5G53770arabidopsis_thalianaAT5G53770.162.452851.5094vigna_radiataVradi0321s00030.155.351245.6522
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.2264amborella_trichopodaERN0655958.845445.6238
AT5G53770arabidopsis_thalianaAT5G53770.166.981156.4151vigna_unguiculataVigun05g194300.1.v1.268.138257.3896
AT5G53770arabidopsis_thalianaAT5G53770.159.43448.6792prunus_aviumPav_sc0002828.1_g450.1.mk:mrna37.860631.0096
AT5G53770arabidopsis_thalianaAT5G53770.166.792457.1698phaseolus_vulgarisESW2143767.816158.046
AT5G53770arabidopsis_thalianaAT5G53770.150.56639.8113asparagus_officinalisONK7922266.666752.4876
AT5G53770arabidopsis_thalianaAT5G53770.166.603855.4717pisum_sativumPsat5g242760.1.cds65.370454.4444
AT5G53770arabidopsis_thalianaAT5G53770.160.56646.4151brachypodium_distachyonKQK0914051.857839.7415
AT5G53770arabidopsis_thalianaAT5G53770.167.547256.6038quercus_subercds-POE96820.165.808855.1471
AT5G53770arabidopsis_thalianaAT5G53770.155.849144.5283ananas_comosusAco021371.1.mrna162.447349.789
AT5G53770arabidopsis_thalianaAT5G53770.184.905780.3774arabidopsis_lyratafgenesh2_kg.8__1270__AT5G53770.184.905780.3774
AT5G53770arabidopsis_thalianaAT5G53770.124.71720.9434quercus_lobataQL05p086116:mrna81.366568.9441
AT5G53770arabidopsis_thalianaAT5G53770.167.547256.7925quercus_lobataQL08p021548:mrna57.835248.6268
AT5G53770arabidopsis_thalianaAT5G53770.163.962351.8868capsicum_annuumPHT6291259.683148.4155
AT5G53770arabidopsis_thalianaAT5G53770.166.226455.0943lupinus_angustifoliusOIV9241066.603455.408
AT5G53770arabidopsis_thalianaAT5G53770.169.245356.7925lupinus_angustifoliusOIW1153366.365354.4304
AT5G53770arabidopsis_thalianaAT5G53770.181.509471.3208eutrema_salsugineumESQ4311874.226864.9485
AT5G53770arabidopsis_thalianaAT5G53770.19086.4151arabidopsis_hallerig09479.t190.684487.0722
AT5G53770arabidopsis_thalianaAT5G53770.166.603855.6604cajanus_cajanC.cajan_13873.t67.624556.5134
AT5G53770arabidopsis_thalianaAT5G53770.168.679254.5283solanum_tuberosumPGSC0003DMT40006443969.865655.4702
AT5G53770arabidopsis_thalianaAT5G53770.161.509447.3585setaria_viridisTKW1598853.181140.9462
AT5G53770arabidopsis_thalianaAT5G53770.158.301944.9057oryza_nivaraONIVA01G27830.149.919238.4491
AT5G53770arabidopsis_thalianaAT5G53770.166.226453.5849ipomoea_trilobaitb06g05730.t167.554.6154
AT5G53770arabidopsis_thalianaAT5G53770.158.301944.9057oryza_glumipatulaOGLUM01G29950.15038.5113
AT5G53770arabidopsis_thalianaAT5G53770.160.943446.7925zea_maysZm00001eb157140_P00154.103941.541
AT5G53770arabidopsis_thalianaAT5G53770.165.094354.3396sesamum_indicumSIN_1022614.t68.725157.3705
AT5G53770arabidopsis_thalianaAT5G53770.159.43446.6038lolium_perennecds.KYUSt_chr3.2673251.053540.0324
AT5G53770arabidopsis_thalianaAT5G53770.153.584937.5472chara_brauniiGBG5886329.460620.6432
AT5G53770arabidopsis_thalianaAT5G53770.166.415157.7358arabis_alpinaKFK2699776.521766.5217
AT5G53770arabidopsis_thalianaAT5G53770.180.754772.2642arabis_alpinaKFK4124480.907472.4008
AT5G53770arabidopsis_thalianaAT5G53770.142.830227.7358ciona_savignyiENSCSAVP0000000413232.756121.2121
AT5G53770arabidopsis_thalianaAT5G53770.181.132173.2076brassica_junceacds.BjuB02g26740S81.593973.6243
AT5G53770arabidopsis_thalianaAT5G53770.180.56671.3208brassica_junceacds.BjuA10g09820S77.215268.3544
AT5G53770arabidopsis_thalianaAT5G53770.152.830240.3774oryza_brachyanthaOB01G35290.163.492148.5261
AT5G53770arabidopsis_thalianaAT5G53770.165.094354.1509glycine_maxKRH2210167.120655.8366
AT5G53770arabidopsis_thalianaAT5G53770.169.43456.9811corymbia_citriodoracds-KAF8024139.164.674953.0756
AT5G53770arabidopsis_thalianaAT5G53770.159.811346.7925aegilops_tauschiiAET3Gv20651200.249.147338.4496
AT5G53770arabidopsis_thalianaAT5G53770.159.811346.6038triticum_urartuTuG1812G0300003181.01.T0151.967240.4918
AT5G53770arabidopsis_thalianaAT5G53770.148.301936.9811oryza_longistaminataKN540788.1_FGP00154.700941.8803
AT5G53770arabidopsis_thalianaAT5G53770.16049.0566fraxinus_excelsiorFRAEX38873_v2_000033540.1.cds71.945758.8235
AT5G53770arabidopsis_thalianaAT5G53770.119.245316.0377fraxinus_excelsiorFRAEX38873_v2_000280510.1.cds80.31566.9291
AT5G53770arabidopsis_thalianaAT5G53770.161.509449.2453fraxinus_excelsiorFRAEX38873_v2_000098630.1.cds66.666753.3742
AT5G53770arabidopsis_thalianaAT5G53770.16046.9811avena_sativa_sangAVESA.00010b.r2.3AG0442720.1.CDS52.475241.0891
AT5G53770arabidopsis_thalianaAT5G53770.16046.6038avena_sativa_sangAVESA.00010b.r2.3CG0496050.1.CDS51.960840.3595
AT5G53770arabidopsis_thalianaAT5G53770.160.188747.1698avena_sativa_sangAVESA.00010b.r2.3DG0543090.1.CDS52.553541.1862
AT5G53770arabidopsis_thalianaAT5G53770.162.641548.4906musa_acuminataMa09_p06410.264.341149.8062
AT5G53770arabidopsis_thalianaAT5G53770.159.245346.2264hordeum_vulgareHORVU.MOREX.r3.3HG0279300.150.891439.7083
AT5G53770arabidopsis_thalianaAT5G53770.159.811346.9811triticum_turgidumTRITD3Bv1G163820.148.323237.9573
AT5G53770arabidopsis_thalianaAT5G53770.146.415136.0377triticum_turgidumTRITD3Av1G181150.260.294146.8137
AT5G53770arabidopsis_thalianaAT5G53770.161.509446.9811panicum_halliiPUZ5541253.181140.6199
AT5G53770arabidopsis_thalianaAT5G53770.161.132147.5472echinochloa_crusgalliscaffold113.204.cds52.427240.7767
AT5G53770arabidopsis_thalianaAT5G53770.160.754747.3585echinochloa_crusgalliscaffold214.85.cds52.700541.0802
AT5G53770arabidopsis_thalianaAT5G53770.162.452849.0566echinochloa_crusgalliscaffold15.120.cds32.804825.7681
AT5G53770arabidopsis_thalianaAT5G53770.168.679256.0377actinidia_chinensisPSS0559968.292755.7223
AT5G53770arabidopsis_thalianaAT5G53770.166.037755.4717citrus_clementinaESR6512267.829556.9767
AT5G53770arabidopsis_thalianaAT5G53770.148.113240.3774citrus_clementinaESR6512475.667763.5015
AT5G53770arabidopsis_thalianaAT5G53770.157.735844.717oryza_indicaBGIOSGA004182-PA53.590241.5061
AT5G53770arabidopsis_thalianaAT5G53770.142.075533.2075selaginella_moellendorffiiEFJ0937272.638457.329
AT5G53770arabidopsis_thalianaAT5G53770.142.452833.5849selaginella_moellendorffiiEFJ3497971.88556.869
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.2264oryza_sativaOs01t0672700-0254.671342.3875
AT5G53770arabidopsis_thalianaAT5G53770.144.71730.9434homo_sapiensENSP0000045583733.239823.0014
AT5G53770arabidopsis_thalianaAT5G53770.159.811346.7925triticum_aestivumTraesCS3D02G271700.149.764538.9325
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.6038triticum_aestivumTraesCS3A02G272100.255.052343.0314
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.7925triticum_aestivumTraesCS3B02G305800.154.76642.9809
AT5G53770arabidopsis_thalianaAT5G53770.158.679244.5283oryza_rufipogonORUFI01G29090.150.242338.126
AT5G53770arabidopsis_thalianaAT5G53770.16046.6038secale_cerealeSECCE3Rv1G0187150.152.131140.4918
AT5G53770arabidopsis_thalianaAT5G53770.168.867956.9811gossypium_raimondiiKJB1337266.849855.3114
AT5G53770arabidopsis_thalianaAT5G53770.166.981155.0943helianthus_annuusmRNA:HanXRQr2_Chr12g053022169.881957.4803
AT5G53770arabidopsis_thalianaAT5G53770.158.679243.9623oryza_punctataOPUNC01G26030.150.323637.7023
AT5G53770arabidopsis_thalianaAT5G53770.158.490644.9057eragrostis_tefEt_3B_029012.CDS49.759238.2022
AT5G53770arabidopsis_thalianaAT5G53770.151.132140.3774eragrostis_tefEt_3A_024628.CDS50.654240
AT5G53770arabidopsis_thalianaAT5G53770.165.660454.9057medicago_truncatulaKEH3873967.704356.6148
AT5G53770arabidopsis_thalianaAT5G53770.155.094340.7547saccharum_spontaneumSspon.03G0031930-1B-mRNA-1:cds42.627731.5328
AT5G53770arabidopsis_thalianaAT5G53770.161.509447.9245sorghum_bicolorOQU8731257.394444.7183
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.7925triticum_dicoccoidesTRIDC3BG045630.550.158739.3651
AT5G53770arabidopsis_thalianaAT5G53770.159.622646.4151triticum_dicoccoidesTRIDC3AG040500.550.158739.0476
AT5G53770arabidopsis_thalianaAT5G53770.148.113239.434coffea_canephoraCDP0591369.482356.9482
AT5G53770arabidopsis_thalianaAT5G53770.169.622656.7925manihot_esculentaOAY5490268.97256.2617
AT5G53770arabidopsis_thalianaAT5G53770.164.71754.1509kalanchoe_fedtschenkoiKaladp0078s0010.1.v1.162.137751.9928
AT5G53770arabidopsis_thalianaAT5G53770.123.207518.8679trifolium_pratenseTp57577_TGAC_v2_mRNA1871856.68246.083
AT5G53770arabidopsis_thalianaAT5G53770.162.452850.1887trifolium_pratenseTp57577_TGAC_v2_mRNA4031747.15137.8917
AT5G53770arabidopsis_thalianaAT5G53770.181.698172.8302brassica_rapa_ro18A10p016640.1_BraROA.183.109474.0883
AT5G53770arabidopsis_thalianaAT5G53770.150.188742.2642eucalyptus_grandisKCW6733371.505460.2151
AT5G53770arabidopsis_thalianaAT5G53770.152.075541.5094dioscorea_rotundataDRNTG_01519.26955
AT5G53770arabidopsis_thalianaAT5G53770.165.471753.9623prunus_persicaONI1277664.259352.963
AT5G53770arabidopsis_thalianaAT5G53770.16046.9811avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0001825.152.475241.0891
AT5G53770arabidopsis_thalianaAT5G53770.16046.6038avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0002066.152.045840.4255
AT5G53770arabidopsis_thalianaAT5G53770.160.188747.1698avena_sativa_ot3098cds.AVESA.00001b.r3.3Dg0001377.152.553541.1862
AT5G53770arabidopsis_thalianaAT5G53770.164.905752.6415chenopodium_quinoaAUR62029381-RA:cds51.190541.5179
AT5G53770arabidopsis_thalianaAT5G53770.138.679230.9434digitaria_exilisDexi5A01G0022910.1:cds55.107544.086
AT5G53770arabidopsis_thalianaAT5G53770.158.867944.717oryza_barthiiOBART04G24340.151.400339.0445
AT5G53770arabidopsis_thalianaAT5G53770.182.264273.5849brassica_oleraceaBo9g112670.183.524974.7126
AT5G53770arabidopsis_thalianaAT5G53770.165.660454.1509prunus_dulcisVVA3783364.444453.1481
AT5G53770arabidopsis_thalianaAT5G53770.136.792524.1509galdieria_sulphurariaEME3049546.762630.6954
AT5G53770arabidopsis_thalianaAT5G53770.142.641535.283corylus_avellanaCav03g23470.t149.45340.919
AT5G53770arabidopsis_thalianaAT5G53770.160.754746.0377leersia_perrieriLPERR01G22360.155.805942.2877
AT5G53770arabidopsis_thalianaAT5G53770.167.547254.9057nicotiana_attenuataOIS9904068.978856.0694
AT5G53770arabidopsis_thalianaAT5G53770.164.905750.566olea_europaeaOE9A055931C158.206445.3469
AT5G53770arabidopsis_thalianaAT5G53770.156.603842.2642olea_europaeaOE9A061873C159.055144.0945
AT5G53770arabidopsis_thalianaAT5G53770.142.075524.5283saccharomyces_cerevisiaeYNL299W34.735220.2492
AT5G53770arabidopsis_thalianaAT5G53770.141.698124.9057saccharomyces_cerevisiaeYOL115W37.842522.6027
AT5G53770arabidopsis_thalianaAT5G53770.167.358556.4151pistacia_veracds-EVM0022264.168.390857.2797
AT5G53770arabidopsis_thalianaAT5G53770.135.094323.7736drosophila_melanogasterFBpp030411418.581412.5874
AT5G53770arabidopsis_thalianaAT5G53770.131.320820.566drosophila_melanogasterFBpp008409440.786226.7813
AT5G53770arabidopsis_thalianaAT5G53770.180.377471.1321brassica_napusCDY1435381.765872.3608
AT5G53770arabidopsis_thalianaAT5G53770.180.754772.0755brassica_napusCDY2021981.992373.1801
AT5G53770arabidopsis_thalianaAT5G53770.162.830253.3962corchorus_capsularisOMO8027443.873537.2859
AT5G53770arabidopsis_thalianaAT5G53770.158.490645.0943oryza_meridionalisOMERI01G23790.154.38641.9298
AT5G53770arabidopsis_thalianaAT5G53770.181.320875.0943camelina_sativaCsa18g024990.180.560774.3925
AT5G53770arabidopsis_thalianaAT5G53770.186.981180.3774camelina_sativaCsa11g085630.185.370478.8889
AT5G53770arabidopsis_thalianaAT5G53770.126.226423.2075camelina_sativaCsa11g057230.154.085647.8599
AT5G53770arabidopsis_thalianaAT5G53770.126.981120.1887camelina_sativaCsa12g051210.153.962340.3774
AT5G53770arabidopsis_thalianaAT5G53770.127.735820.3774camelina_sativaCsa20g020890.155.471740.7547
AT5G53770arabidopsis_thalianaAT5G53770.182.075575.0943camelina_sativaCsa02g051140.180.406773.5675
AT5G53770arabidopsis_thalianaAT5G53770.127.358520.3774camelina_sativaCsa17g031100.152.919739.4161
AT5G53770arabidopsis_thalianaAT5G53770.163.962353.2075malus_domestica_goldenmRNA:MD03G018740061.524551.1797
AT5G53770arabidopsis_thalianaAT5G53770.167.547255.4717daucus_carotaKZM9389968.582456.3218
AT5G53770arabidopsis_thalianaAT5G53770.165.660453.9623rosa_chinensisPRQ3130465.413553.7594
AT5G53770arabidopsis_thalianaAT5G53770.166.981156.9811juglans_regiacds.Jr02_21750_p166.604156.6604
AT5G53770arabidopsis_thalianaAT5G53770.163.962350nymphaea_colorataNC9G0112810.1:cds57.849845.2218
AT5G53770arabidopsis_thalianaAT5G53770.166.792456.9811vigna_angularisKOM4360667.686457.7438
AT5G53770arabidopsis_thalianaAT5G53770.161.509447.3585setaria_italicaKQL0635656.893543.8045
AT5G53770arabidopsis_thalianaAT5G53770.152.641538.8679physcomitrium_patensPp3c24_20390V3.235.451126.1754
AT5G53770arabidopsis_thalianaAT5G53770.165.849154.3396vitis_viniferaVitvi19g00231_P00170.221357.9477
AT5G53770arabidopsis_thalianaAT5G53770.155.849146.0377cynara_cardunculusKVH9303765.777854.2222

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005634located_in nucleus1ISMArabidopsis_thaliana(3702)Component
GO:0006364acts_upstream_of_or_within rRNA processing1IMPArabidopsis_thaliana(3702)Process
GO:0070566enables adenylyltransferase activity1IMPArabidopsis_thaliana(3702)Function

Expression