Description

Ensembl ID AT5G51130 Gene ID 835187 Accession -
Symbol AT5G51130 Alias - Full Name S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Status Confidence Length 2414 bases Strand Plus strand
Position 5 : 20781658 - 20784071 RNA binding domain Bin3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT5G51130 Bin3 PF06859 1.3e-40 1
AT5G51130 Bin3 PF06859 9.5e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT5G51130-201 AT5G51130 1066 275aa AT5G51130

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G51130

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT5G51130arabidopsis_thalianaAT5G51130.142.138426.4151chondrus_crispusCDF4071830.180218.9189
AT5G51130arabidopsis_thalianaAT5G51130.145.28329.2453chlamydomonas_reinhardtiiPNW7263615.550810.0432
AT5G51130arabidopsis_thalianaAT5G51130.158.176138.9937marchantia_polymorphaPTQ4977948.429332.4607
AT5G51130arabidopsis_thalianaAT5G51130.158.490647.7987papaver_somniferumRZC4435967.391355.0725
AT5G51130arabidopsis_thalianaAT5G51130.159.43448.7421papaver_somniferumRZC6616868.478356.1594
AT5G51130arabidopsis_thalianaAT5G51130.153.459140.566cannabis_sativa_femalecds.evm.model.02.131171.7354.4304
AT5G51130arabidopsis_thalianaAT5G51130.170.754755.3459cannabis_sativa_femalecds.evm.model.02.154375.757659.2593
AT5G51130arabidopsis_thalianaAT5G51130.155.974845.9119ficus_caricaFCD_00017099-RA:cds74.47761.0879
AT5G51130arabidopsis_thalianaAT5G51130.170.440354.0881theobroma_cacaoEOY3071171.111154.6032
AT5G51130arabidopsis_thalianaAT5G51130.161.635250.3145beta_vulgarisKMT0314666.894254.6075
AT5G51130arabidopsis_thalianaAT5G51130.156.918244.6541cucumis_meloMELO3C024707.2.157.278544.9367
AT5G51130arabidopsis_thalianaAT5G51130.159.748448.4277cucumis_sativusKGN6508867.137854.417
AT5G51130arabidopsis_thalianaAT5G51130.170.125854.717populus_trichocarpaPotri.018G084700.1.v4.167.168752.4096
AT5G51130arabidopsis_thalianaAT5G51130.146.855327.9874caenorhabditis_elegansY17G7B.18b.139.107623.3596
AT5G51130arabidopsis_thalianaAT5G51130.161.949749.3711lactuca_sativacds-PLY72159.175.769260.3846
AT5G51130arabidopsis_thalianaAT5G51130.137.735824.5283ostreococcus_lucimarinusABO9454253.097334.5133
AT5G51130arabidopsis_thalianaAT5G51130.151.572338.9937eragrostis_curvulaTVU0481260.294145.5882
AT5G51130arabidopsis_thalianaAT5G51130.151.572339.3082eragrostis_curvulaTVU0481360.294145.9559
AT5G51130arabidopsis_thalianaAT5G51130.161.635248.7421citrullus_lanatusCla97C06G118690.172.058856.9853
AT5G51130arabidopsis_thalianaAT5G51130.161.006350vigna_radiataVradi07g28490.173.207660
AT5G51130arabidopsis_thalianaAT5G51130.139.308228.3019amborella_trichopodaERM9869863.775545.9184
AT5G51130arabidopsis_thalianaAT5G51130.166.981153.7736vigna_unguiculataVigun03g023400.1.v1.275.531960.6383
AT5G51130arabidopsis_thalianaAT5G51130.166.981152.8302phaseolus_vulgarisESW3230473.195957.732
AT5G51130arabidopsis_thalianaAT5G51130.159.748444.6541asparagus_officinalisONK6909942.222231.5556
AT5G51130arabidopsis_thalianaAT5G51130.161.320848.4277pisum_sativumPsat7g014440.2.cds67.708353.4722
AT5G51130arabidopsis_thalianaAT5G51130.159.119546.8553brachypodium_distachyonKQJ9920759.493747.1519
AT5G51130arabidopsis_thalianaAT5G51130.125.471722.956quercus_subercds-POE55918.168.067261.3445
AT5G51130arabidopsis_thalianaAT5G51130.161.320851.2579quercus_subercds-POE81294.149.492441.3706
AT5G51130arabidopsis_thalianaAT5G51130.165.408854.717quercus_subercds-POE81293.176.190563.7363
AT5G51130arabidopsis_thalianaAT5G51130.156.603840.8805ananas_comosusAco006736.1.mrna165.693447.4453
AT5G51130arabidopsis_thalianaAT5G51130.195.28393.3962arabidopsis_lyratafgenesh2_kg.8__997__AT5G51130.196.805194.8882
AT5G51130arabidopsis_thalianaAT5G51130.163.836553.7736quercus_lobataQL01p004043:mrna74.35962.6374
AT5G51130arabidopsis_thalianaAT5G51130.155.031444.9686capsicum_annuumPHT8177168.359455.8594
AT5G51130arabidopsis_thalianaAT5G51130.167.295652.5157lupinus_angustifoliusOIW0999867.721552.8481
AT5G51130arabidopsis_thalianaAT5G51130.148.427735.8491lupinus_angustifoliusOIV9585668.444450.6667
AT5G51130arabidopsis_thalianaAT5G51130.149.371134.2767lupinus_angustifoliusOIW0892060.384641.9231
AT5G51130arabidopsis_thalianaAT5G51130.161.320840.8805lupinus_angustifoliusOIV9585742.576428.3843
AT5G51130arabidopsis_thalianaAT5G51130.154.088149.6855eutrema_salsugineumESQ5587769.918764.2276
AT5G51130arabidopsis_thalianaAT5G51130.151.257946.8553eutrema_salsugineumESQ5604781.094574.1294
AT5G51130arabidopsis_thalianaAT5G51130.149.685545.9119eutrema_salsugineumESQ5605088.268281.5642
AT5G51130arabidopsis_thalianaAT5G51130.184.905781.1321eutrema_salsugineumESQ4346587.947984.0391
AT5G51130arabidopsis_thalianaAT5G51130.149.685545.9119eutrema_salsugineumESQ5604588.268281.5642
AT5G51130arabidopsis_thalianaAT5G51130.151.257946.8553eutrema_salsugineumESQ4370881.094574.1294
AT5G51130arabidopsis_thalianaAT5G51130.194.339692.7673arabidopsis_hallerig08439.t195.541493.949
AT5G51130arabidopsis_thalianaAT5G51130.166.352250cajanus_cajanC.cajan_15688.t74.822756.383
AT5G51130arabidopsis_thalianaAT5G51130.162.264250solanum_tuberosumPGSC0003DMT40005577154.246643.5616
AT5G51130arabidopsis_thalianaAT5G51130.160.377446.5409setaria_viridisTKW1151364.429549.6644
AT5G51130arabidopsis_thalianaAT5G51130.161.635247.1698oryza_nivaraONIVA08G25200.162.222247.619
AT5G51130arabidopsis_thalianaAT5G51130.162.264247.7987ipomoea_trilobaitb14g04640.t166.891951.3514
AT5G51130arabidopsis_thalianaAT5G51130.159.748445.5975oryza_glumipatulaOGLUM08G23400.163.122948.1728
AT5G51130arabidopsis_thalianaAT5G51130.156.603843.3962zea_maysZm00001eb198370_P00259.800745.8472
AT5G51130arabidopsis_thalianaAT5G51130.155.345943.7107lolium_perennecds.KYUSt_chr7.2514556.957944.9838
AT5G51130arabidopsis_thalianaAT5G51130.152.201334.5912chara_brauniiGBG6755832.358721.4425
AT5G51130arabidopsis_thalianaAT5G51130.185.534678.3019arabis_alpinaKFK2672788.888981.3726
AT5G51130arabidopsis_thalianaAT5G51130.127.358517.2956ciona_savignyiENSCSAVP0000001360554.71734.5912
AT5G51130arabidopsis_thalianaAT5G51130.182.075575.7862brassica_junceacds.BjuB05g13260S80.307774.1538
AT5G51130arabidopsis_thalianaAT5G51130.183.647875.7862brassica_junceacds.BjuA02g28330S82.352974.613
AT5G51130arabidopsis_thalianaAT5G51130.180.817672.327brassica_junceacds.BjuA03g44190S85.099376.1589
AT5G51130arabidopsis_thalianaAT5G51130.175.786270.4403brassica_junceacds.BjuB08g47510S79.801374.1722
AT5G51130arabidopsis_thalianaAT5G51130.137.106927.044oryza_brachyanthaOB08G28910.167.045548.8636
AT5G51130arabidopsis_thalianaAT5G51130.121.698116.6667oryza_brachyanthaOB08G28900.146.621635.8108
AT5G51130arabidopsis_thalianaAT5G51130.167.924551.8868glycine_maxKRH4152478.260959.7826
AT5G51130arabidopsis_thalianaAT5G51130.164.465451.2579corymbia_citriodoracds-KAF8036295.170.205555.8219
AT5G51130arabidopsis_thalianaAT5G51130.160.062945.5975aegilops_tauschiiAET7Gv20654700.251.902239.4022
AT5G51130arabidopsis_thalianaAT5G51130.161.320847.1698aegilops_tauschiiAET7Gv20654100.254.317541.7827
AT5G51130arabidopsis_thalianaAT5G51130.159.43445.9119triticum_urartuTuG1812G0700002824.01.T0161.563547.557
AT5G51130arabidopsis_thalianaAT5G51130.159.748446.2264triticum_urartuTuG1812G0700002825.01.T0159.1945.7944
AT5G51130arabidopsis_thalianaAT5G51130.151.572341.5094oryza_longistaminataKN541155.1_FGP00561.19449.2537
AT5G51130arabidopsis_thalianaAT5G51130.135.849126.7296oryza_longistaminataKN544758.1_FGP00155.072541.0628
AT5G51130arabidopsis_thalianaAT5G51130.163.836551.8868fraxinus_excelsiorFRAEX38873_v2_000369080.1.cds69.759556.701
AT5G51130arabidopsis_thalianaAT5G51130.164.150950fraxinus_excelsiorFRAEX38873_v2_000395400.1.cds69.387854.0816
AT5G51130arabidopsis_thalianaAT5G51130.158.490645.283avena_sativa_sangAVESA.00010b.r2.7DG1387720.1.CDS59.047645.7143
AT5G51130arabidopsis_thalianaAT5G51130.159.119545.5975avena_sativa_sangAVESA.00010b.r2.5CG0928790.1.CDS49.343838.0577
AT5G51130arabidopsis_thalianaAT5G51130.158.80545.5975avena_sativa_sangAVESA.00010b.r2.7AG1220680.1.CDS57.538544.6154
AT5G51130arabidopsis_thalianaAT5G51130.164.465444.3396musa_acuminataMa01_p05160.165.079444.7619
AT5G51130arabidopsis_thalianaAT5G51130.161.949747.4843oryza_glaberrimaORGLA08G0223700.165.016549.835
AT5G51130arabidopsis_thalianaAT5G51130.159.43445.9119triticum_turgidumTRITD7Av1G109110.261.563547.557
AT5G51130arabidopsis_thalianaAT5G51130.135.849126.7296triticum_turgidumTRITD7Bv1G083170.161.956546.1957
AT5G51130arabidopsis_thalianaAT5G51130.159.43446.5409triticum_turgidumTRITD7Bv1G083270.261.363648.0519
AT5G51130arabidopsis_thalianaAT5G51130.159.748446.2264triticum_turgidumTRITD7Av1G108990.159.1945.7944
AT5G51130arabidopsis_thalianaAT5G51130.159.748445.5975panicum_halliiPUZ5249264.189248.9865
AT5G51130arabidopsis_thalianaAT5G51130.158.80546.2264echinochloa_crusgalliscaffold54.430.cds62.96349.4949
AT5G51130arabidopsis_thalianaAT5G51130.157.232744.6541echinochloa_crusgalliscaffold161.38.cds46.310436.1323
AT5G51130arabidopsis_thalianaAT5G51130.157.547245.5975echinochloa_crusgalliscaffold38.75.cds43.571434.5238
AT5G51130arabidopsis_thalianaAT5G51130.161.006349.0566actinidia_chinensisPSS2085368.070254.7368
AT5G51130arabidopsis_thalianaAT5G51130.123.584918.5535citrus_clementinaESR6448259.523846.8254
AT5G51130arabidopsis_thalianaAT5G51130.161.635247.1698oryza_indicaBGIOSGA029086-PA60.122746.0123
AT5G51130arabidopsis_thalianaAT5G51130.150.314534.2767selaginella_moellendorffiiEFJ1613158.394239.781
AT5G51130arabidopsis_thalianaAT5G51130.15035.2201selaginella_moellendorffiiEFJ0803858.029240.8759
AT5G51130arabidopsis_thalianaAT5G51130.161.635247.1698oryza_sativaOs08t0540500-0162.222247.619
AT5G51130arabidopsis_thalianaAT5G51130.146.540929.5597homo_sapiensENSP0000030854621.480413.643
AT5G51130arabidopsis_thalianaAT5G51130.133.962317.2956homo_sapiensENSP0000033520136.986318.8356
AT5G51130arabidopsis_thalianaAT5G51130.159.748445.5975triticum_aestivumTraesCS7B02G165600.158.461544.6154
AT5G51130arabidopsis_thalianaAT5G51130.159.748446.2264triticum_aestivumTraesCS7A02G266800.159.1945.7944
AT5G51130arabidopsis_thalianaAT5G51130.159.43445.283triticum_aestivumTraesCS7D02G268000.159.062545
AT5G51130arabidopsis_thalianaAT5G51130.160.062947.1698triticum_aestivumTraesCS7D02G267900.262.21548.8599
AT5G51130arabidopsis_thalianaAT5G51130.159.43445.9119triticum_aestivumTraesCS7A02G266900.161.563547.557
AT5G51130arabidopsis_thalianaAT5G51130.159.43446.5409triticum_aestivumTraesCS7B02G165400.161.363648.0519
AT5G51130arabidopsis_thalianaAT5G51130.160.062945.5975oryza_rufipogonORUFI08G24610.164.745849.1525
AT5G51130arabidopsis_thalianaAT5G51130.158.80544.9686secale_cerealeSECCE7Rv1G0483480.159.177245.2532
AT5G51130arabidopsis_thalianaAT5G51130.159.119545.9119secale_cerealeSECCE7Rv1G0483440.160.063946.6454
AT5G51130arabidopsis_thalianaAT5G51130.171.069252.8302gossypium_raimondiiKJB0644670.40552.3364
AT5G51130arabidopsis_thalianaAT5G51130.129.245321.3836helianthus_annuusmRNA:HanXRQr2_Chr03g008842183.035760.7143
AT5G51130arabidopsis_thalianaAT5G51130.163.207547.7987helianthus_annuusmRNA:HanXRQr2_Chr09g036354170.526353.3333
AT5G51130arabidopsis_thalianaAT5G51130.161.635247.4843oryza_punctataOPUNC08G20190.160.122746.319
AT5G51130arabidopsis_thalianaAT5G51130.158.176143.7107eragrostis_tefEt_8B_059057.CDS62.711947.1186
AT5G51130arabidopsis_thalianaAT5G51130.157.861643.3962eragrostis_tefEt_8A_056685.CDS61.952946.4646
AT5G51130arabidopsis_thalianaAT5G51130.164.465450.3145medicago_truncatulaAET0523069.965954.6075
AT5G51130arabidopsis_thalianaAT5G51130.142.767330.8176saccharum_spontaneumSspon.06G0003370-1A-mRNA-1:cds56.431540.6639
AT5G51130arabidopsis_thalianaAT5G51130.160.691845.283saccharum_spontaneumSspon.06G0003360-1A-mRNA-1:cds51.329838.2979
AT5G51130arabidopsis_thalianaAT5G51130.160.377446.2264sorghum_bicolorOQU8078862.745148.0392
AT5G51130arabidopsis_thalianaAT5G51130.160.691845.283sorghum_bicolorEES0378264.119647.8405
AT5G51130arabidopsis_thalianaAT5G51130.143.081832.7044triticum_dicoccoidesTRIDC7BG026140.167.487751.2315
AT5G51130arabidopsis_thalianaAT5G51130.156.918244.3396triticum_dicoccoidesTRIDC7AG034920.565.579751.087
AT5G51130arabidopsis_thalianaAT5G51130.156.603844.6541triticum_dicoccoidesTRIDC7AG034950.266.914552.7881
AT5G51130arabidopsis_thalianaAT5G51130.160.062947.1698triticum_dicoccoidesTRIDC7BG026080.153.203341.7827
AT5G51130arabidopsis_thalianaAT5G51130.163.52250.6289coffea_canephoraCDP0329069.655255.5172
AT5G51130arabidopsis_thalianaAT5G51130.168.23954.0881manihot_esculentaOAY2726065.558951.9637
AT5G51130arabidopsis_thalianaAT5G51130.151.257938.9937kalanchoe_fedtschenkoiKaladp0028s0061.1.v1.168.776452.3207
AT5G51130arabidopsis_thalianaAT5G51130.163.207550.3145kalanchoe_fedtschenkoiKaladp0095s0717.1.v1.170.279755.9441
AT5G51130arabidopsis_thalianaAT5G51130.164.465450trifolium_pratenseTp57577_TGAC_v2_mRNA2426170.689754.8276
AT5G51130arabidopsis_thalianaAT5G51130.176.100670.1258brassica_rapa_ro18A02p018830.1_BraROA.174.461568.6154
AT5G51130arabidopsis_thalianaAT5G51130.163.207550.6289eucalyptus_grandisKCW8239270.034856.0976
AT5G51130arabidopsis_thalianaAT5G51130.157.547244.0252dioscorea_rotundataDRNTG_06045.263.541748.6111
AT5G51130arabidopsis_thalianaAT5G51130.166.981151.5723prunus_persicaONH9803972.696255.9727
AT5G51130arabidopsis_thalianaAT5G51130.160.062946.2264avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0001685.151.621639.7297
AT5G51130arabidopsis_thalianaAT5G51130.158.490645.283avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0000664.151.523539.8892
AT5G51130arabidopsis_thalianaAT5G51130.159.119545.5975avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0000198.156.119443.2836
AT5G51130arabidopsis_thalianaAT5G51130.161.949750.6289chenopodium_quinoaAUR62021639-RA:cds67.465855.137
AT5G51130arabidopsis_thalianaAT5G51130.157.232746.5409chenopodium_quinoaAUR62008451-RA:cds65.467653.2374
AT5G51130arabidopsis_thalianaAT5G51130.158.490645.283digitaria_exilisDexi6A01G0020010.1:cds61.79447.8405
AT5G51130arabidopsis_thalianaAT5G51130.158.490645.283digitaria_exilisDexi6B01G0019070.1:cds61.79447.8405
AT5G51130arabidopsis_thalianaAT5G51130.151.886841.195digitaria_exilisDexiUA01G0023650.1:cds6047.6364
AT5G51130arabidopsis_thalianaAT5G51130.159.748445.5975oryza_barthiiOBART08G22140.164.189248.9865
AT5G51130arabidopsis_thalianaAT5G51130.159.748445.5975oryza_barthiiOBART09G03820.164.189248.9865
AT5G51130arabidopsis_thalianaAT5G51130.184.276777.673brassica_oleraceaBo2g050600.181.707375.3049
AT5G51130arabidopsis_thalianaAT5G51130.177.67370.7547brassica_oleraceaBo3g023840.182.608775.2508
AT5G51130arabidopsis_thalianaAT5G51130.158.176145.283prunus_dulcisVVA2358172.54956.4706
AT5G51130arabidopsis_thalianaAT5G51130.166.037751.5723prunus_dulcisVVA1052673.170757.1429
AT5G51130arabidopsis_thalianaAT5G51130.154.402540.566corylus_avellanaCav11g13050.t159.450244.3299
AT5G51130arabidopsis_thalianaAT5G51130.160.691845.283leersia_perrieriLPERR08G18840.163.071947.0588
AT5G51130arabidopsis_thalianaAT5G51130.162.893149.6855olea_europaeaOE9A029534C368.259453.9249
AT5G51130arabidopsis_thalianaAT5G51130.162.264250.9434olea_europaeaOE9A058112C463.461551.9231
AT5G51130arabidopsis_thalianaAT5G51130.155.974844.3396pistacia_veracds-EVM0031505.166.17152.4164
AT5G51130arabidopsis_thalianaAT5G51130.143.081827.3585drosophila_melanogasterFBpp031043745.666729
AT5G51130arabidopsis_thalianaAT5G51130.134.276719.4969drosophila_melanogasterFBpp007319445.798326.0504
AT5G51130arabidopsis_thalianaAT5G51130.144.339627.9874drosophila_melanogasterFBpp031232910.31466.51061
AT5G51130arabidopsis_thalianaAT5G51130.183.647877.673brassica_napusCDY1633782.098876.2346
AT5G51130arabidopsis_thalianaAT5G51130.176.100668.8679brassica_napusCDY3263980.936573.2441
AT5G51130arabidopsis_thalianaAT5G51130.180.503172.6415brassica_napusCDY3885385.049876.7442
AT5G51130arabidopsis_thalianaAT5G51130.184.276777.9874brassica_napusCDX9156884.542678.2334
AT5G51130arabidopsis_thalianaAT5G51130.164.465448.7421corchorus_capsularisOMO8264242.355432.0248
AT5G51130arabidopsis_thalianaAT5G51130.161.635247.1698oryza_meridionalisOMERI08G17090.162.222247.619
AT5G51130arabidopsis_thalianaAT5G51130.192.767389.6226camelina_sativaCsa09g050040.188.323485.3293
AT5G51130arabidopsis_thalianaAT5G51130.192.767389.3082camelina_sativaCsa18g021940.188.323485.0299
AT5G51130arabidopsis_thalianaAT5G51130.191.823987.7358camelina_sativaCsa11g082630.188.484884.5455
AT5G51130arabidopsis_thalianaAT5G51130.164.150951.2579malus_domestica_goldenmRNA:MD15G016860076.404561.0487
AT5G51130arabidopsis_thalianaAT5G51130.127.358522.0126malus_domestica_goldenmRNA:MD02G004870078.378463.0631
AT5G51130arabidopsis_thalianaAT5G51130.154.088142.1384daucus_carotaKZM8389968.25453.1746
AT5G51130arabidopsis_thalianaAT5G51130.164.465452.8302rosa_chinensisPRQ4665469.965957.3379
AT5G51130arabidopsis_thalianaAT5G51130.168.867954.717juglans_regiacds.Jr01_28060_p174.489859.1837
AT5G51130arabidopsis_thalianaAT5G51130.162.264250.6289juglans_regiacds.Jr01_28070_p174.157360.2996
AT5G51130arabidopsis_thalianaAT5G51130.165.723353.7736vigna_angularisKOM5781975.724661.9565
AT5G51130arabidopsis_thalianaAT5G51130.160.377446.5409setaria_italicaKQL0274864.429549.6644
AT5G51130arabidopsis_thalianaAT5G51130.153.144732.3899physcomitrium_patensPp3c17_15270V3.353.48132.5949
AT5G51130arabidopsis_thalianaAT5G51130.163.836551.8868vitis_viniferaVitvi11g00296_P00170.97957.6923
AT5G51130arabidopsis_thalianaAT5G51130.163.52249.3711cynara_cardunculusKVI0124470.629454.8951

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005737located_in cytoplasm1ISMArabidopsis_thaliana(3702)Component
GO:0010468acts_upstream_of_or_within regulation of gene expression1IEAArabidopsis_thaliana(3702)Process
GO:0016070acts_upstream_of_or_within RNA metabolic process1IEAArabidopsis_thaliana(3702)Process

Expression