| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AT4G20520 | Gene ID |
827800 |
Accession |
- |
| Symbol |
AT4G20520 |
Alias |
- |
Full Name |
RNA binding / RNA-directed DNA polymerase |
| Status |
Confidence |
Length |
1947 bases |
Strand |
Plus strand |
| Position |
4 : 11045912 - 11047858 |
RNA binding domain |
RVT_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AT4G20520 |
RVT_1 |
PF00078 |
1.8e-09 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| AT4G20520-201 |
AT4G20520 |
1273 |
376aa |
AT4G20520 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT4G20520 | arabidopsis_thaliana | AT5G48540.1 | 33.8403 | 19.0114 | arabidopsis_thaliana | AT4G20520.1 | 23.6702 | 13.2979 |
| AT4G20520 | arabidopsis_thaliana | AT4G20590.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G21910.1 | 33.4532 | 16.9065 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20530.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20560.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G21945.1 | 33.9869 | 16.3399 | arabidopsis_thaliana | AT4G20520.1 | 13.8298 | 6.64894 |
| AT4G20520 | arabidopsis_thaliana | AT3G22030.1 | 29.6443 | 14.6245 | arabidopsis_thaliana | AT4G20520.1 | 19.9468 | 9.84043 |
| AT4G20520 | arabidopsis_thaliana | AT3G21930.1 | 32.0144 | 15.4676 | arabidopsis_thaliana | AT4G20520.1 | 23.6702 | 11.4362 |
| AT4G20520 | arabidopsis_thaliana | AT3G22060.1 | 38.8889 | 20.2381 | arabidopsis_thaliana | AT4G20520.1 | 26.0638 | 13.5638 |
| AT4G20520 | arabidopsis_thaliana | AT4G20680.1 | 33.3333 | 16.4835 | arabidopsis_thaliana | AT4G20520.1 | 24.2021 | 11.9681 |
| AT4G20520 | arabidopsis_thaliana | AT3G22050.1 | 37.5969 | 21.7054 | arabidopsis_thaliana | AT4G20520.1 | 25.7979 | 14.8936 |
| AT4G20520 | arabidopsis_thaliana | AT4G20570.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20640.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20550.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20600.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G21990.1 | 35.9375 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.4681 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G22000.1 | 32.6007 | 16.1172 | arabidopsis_thaliana | AT4G20520.1 | 23.6702 | 11.7021 |
| AT4G20520 | arabidopsis_thaliana | AT3G21940.1 | 30.1818 | 15.2727 | arabidopsis_thaliana | AT4G20520.1 | 22.0745 | 11.1702 |
| AT4G20520 | arabidopsis_thaliana | AT4G20645.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20580.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G22020.1 | 30.4348 | 15.4589 | arabidopsis_thaliana | AT4G20520.1 | 16.7553 | 8.51064 |
| AT4G20520 | arabidopsis_thaliana | AT4G20670.1 | 34.9624 | 17.6692 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G58310.1 | 35.6589 | 20.155 | arabidopsis_thaliana | AT4G20520.1 | 24.4681 | 13.8298 |
| AT4G20520 | arabidopsis_thaliana | AT3G21960.1 | 32.4427 | 16.4122 | arabidopsis_thaliana | AT4G20520.1 | 22.6064 | 11.4362 |
| AT4G20520 | arabidopsis_thaliana | AT3G21900.2 | 30.2326 | 16.6667 | arabidopsis_thaliana | AT4G20520.1 | 20.7447 | 11.4362 |
| AT4G20520 | arabidopsis_thaliana | AT3G22040.1 | 35.4086 | 17.1206 | arabidopsis_thaliana | AT4G20520.1 | 24.2021 | 11.7021 |
| AT4G20520 | arabidopsis_thaliana | AT3G21920.2 | 30 | 14.3333 | arabidopsis_thaliana | AT4G20520.1 | 23.9362 | 11.4362 |
| AT4G20520 | arabidopsis_thaliana | AT4G20610.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20620.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G22010.1 | 34.981 | 17.1103 | arabidopsis_thaliana | AT4G20520.1 | 24.4681 | 11.9681 |
| AT4G20520 | arabidopsis_thaliana | AT3G21980.1 | 33.7778 | 16.8889 | arabidopsis_thaliana | AT4G20520.1 | 20.2128 | 10.1064 |
| AT4G20520 | arabidopsis_thaliana | AT3G22057.1 | 32.1839 | 16.092 | arabidopsis_thaliana | AT4G20520.1 | 14.8936 | 7.44681 |
| AT4G20520 | arabidopsis_thaliana | AT2G31620.1 | 32.549 | 18.4314 | arabidopsis_thaliana | AT4G20520.1 | 22.0745 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20630.1 | 36.3281 | 18.3594 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT4G20540.1 | 34.4444 | 17.4074 | arabidopsis_thaliana | AT4G20520.1 | 24.734 | 12.5 |
| AT4G20520 | arabidopsis_thaliana | AT3G29050.2 | 29.1228 | 14.0351 | arabidopsis_thaliana | AT4G20520.1 | 22.0745 | 10.6383 |
| AT4G20520 | arabidopsis_thaliana | AT3G29040.1 | 35.6863 | 15.2941 | arabidopsis_thaliana | AT4G20520.1 | 24.2021 | 10.3723 |
| AT4G20520 | arabidopsis_thaliana | AT3G21970.1 | 34.0909 | 16.6667 | arabidopsis_thaliana | AT4G20520.1 | 23.9362 | 11.7021 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 22.3404 | 11.9681 | theobroma_cacao | EOY28588 | 31.2268 | 16.7286 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 23.6702 | 13.0319 | amborella_trichopoda | ERN00668 | 31.338 | 17.2535 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 14.3617 | 7.18085 | amborella_trichopoda | ERN00664 | 33.1288 | 16.5644 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 15.9574 | 7.71277 | prunus_avium | Pav_sc0000624.1_g1720.1.mk:CDS:1 | 30.6122 | 14.7959 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 20.7447 | 11.1702 | prunus_avium | Pav_sc0000194.1_g120.1.mk:CDS:1 | 31.7073 | 17.0732 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 17.5532 | 10.1064 | eucalyptus_grandis | KCW74367 | 28.4483 | 16.3793 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 21.2766 | 12.766 | corylus_avellana | Cav02g33890.t1 | 29.1971 | 17.5182 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 8.7766 | 5.05319 | corylus_avellana | Cav02g32990.t1 | 22.7586 | 13.1034 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 21.2766 | 12.766 | corylus_avellana | Cav03g07720.t1 | 29.1971 | 17.5182 |
| AT4G20520 | arabidopsis_thaliana | AT4G20520.1 | 9.84043 | 5.58511 | corylus_avellana | Cav02g33520.t1 | 23.5669 | 13.3758 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0003674 | enables molecular_function | 1 | ND | Arabidopsis_thaliana(3702) | Function |
| GO:0005737 | located_in cytoplasm | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0008150 | involved_in biological_process | 1 | ND | Arabidopsis_thaliana(3702) | Process |
