RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	AT4G16265	Gene ID	827321	Accession	-
Symbol	NRPB9B	Alias	-	Full Name	RNA polymerases M/15 Kd subunit
Status	Confidence	Length	1898 bases	Strand	Minus strand
Position	4 : 9202250 - 9204147	RNA binding domain	RNA_POL_M_15KD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
AT4G16265	RNA_POL_M_15KD	PF02150	2.3e-12	1
AT4G16265	RNA_POL_M_15KD	PF02150	3.7e-06	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
NRPB9B-202	AT4G16265	633	133aa	AT4G16265

Gene Model

Click here to download AT4G16265's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download AT4G16265's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT4G16265	arabidopsis_thaliana	AT4G07950.1	37.7358	21.6981	arabidopsis_thaliana	AT4G16265.2	30.0752	17.2932
AT4G16265	arabidopsis_thaliana	AT1G01210.3	38.6792	22.6415	arabidopsis_thaliana	AT4G16265.2	30.8271	18.0451
AT4G16265	arabidopsis_thaliana	AT3G25940.1	39.4958	25.2101	arabidopsis_thaliana	AT4G16265.2	35.3383	22.5564
AT4G16265	arabidopsis_thaliana	AT3G16980.1	89.4737	85.0877	arabidopsis_thaliana	AT4G16265.2	76.6917	72.9323

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT4G16265	arabidopsis_thaliana	AT4G16265.2	48.8722	33.0827	chondrus_crispus	CDF35768	33.8542	22.9167
AT4G16265	arabidopsis_thaliana	AT4G16265.2	47.3684	33.8346	chlamydomonas_reinhardtii	PNW74892	53.3898	38.1356
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	64.6617	marchantia_polymorpha	PTQ42786	85.0877	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	61.6541	51.1278	marchantia_polymorpha	PTQ33641	70.0855	58.1197
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	68.4211	papaver_somniferum	RZC48659	85.0877	79.8246
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.9173	cannabis_sativa_female	cds.novel_model_4824_5bd9a17a	86.8421	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.9398	67.6692	ficus_carica	FCD_00013416-RA:cds	43.3476	38.6266
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.9173	theobroma_cacao	EOY06688	85.0877	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	63.9098	beta_vulgaris	KMT16228	85.9649	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	cucumis_melo	MELO3C006706.2.1	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	cucumis_sativus	KGN57159	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	63.9098	populus_trichocarpa	Potri.008G106900.1.v4.1	85.0877	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	49.6241	populus_trichocarpa	Potri.010G142500.2.v4.1	82.7957	70.9677
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	solanum_lycopersicum	Solyc05g053430.3.1	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	40.6015	caenorhabditis_elegans	Y97E10AR.5.1	46.7066	32.3353
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	67.6692	lactuca_sativa	cds-PLY84032.1	86.8421	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	55.6391	39.8496	ostreococcus_lucimarinus	ABO94742	59.6774	42.7419
AT4G16265	arabidopsis_thaliana	AT4G16265.2	66.1654	57.1429	eragrostis_curvula	TVU06287	77.193	66.6667
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	58.6466	eragrostis_curvula	TVU06294	70.229	59.542
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.1053	eragrostis_curvula	TVU37926	66.6667	49.1228
AT4G16265	arabidopsis_thaliana	AT4G16265.2	50.3759	42.1053	eragrostis_curvula	TVT97726	50.7576	42.4242
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	66.1654	eragrostis_curvula	TVU49764	84.2105	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	64.6617	55.6391	eragrostis_curvula	TVU06279	75.4386	64.9123
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	citrullus_lanatus	Cla97C05G088090.1	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	51.1278	vigna_radiata	Vradi05g00480.1	85.3933	76.4045
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	48.1203	amborella_trichopoda	ERN01322	69.5238	60.9524
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	64.6617	vigna_unguiculata	Vigun09g006800.1.v1.2	85.0877	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	64.6617	51.1278	vigna_unguiculata	Vigun03g415600.1.v1.2	75.4386	59.6491
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	66.1654	prunus_avium	Pav_sc0001031.1_g100.1.mk:mrna	87.7193	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	64.6617	phaseolus_vulgaris	ESW10991	85.0877	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	54.1353	phaseolus_vulgaris	ESW26356	69.9248	54.1353
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	63.1579	asparagus_officinalis	ONK63193	81.5789	73.6842
AT4G16265	arabidopsis_thaliana	AT4G16265.2	63.1579	51.8797	pisum_sativum	Psat6g078760.2.cds	68.2927	56.0976
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	59.3985	brachypodium_distachyon	PNT78390	52.0833	41.1458
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	39.0977	brachypodium_distachyon	KQK15125	63.4783	45.2174
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	brachypodium_distachyon	KQJ86340	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	63.1579	ananas_comosus	Aco027798.1.mrna1	81.5789	73.6842
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	63.9098	ananas_comosus	Aco011708.1.mrna1	68.8406	61.5942
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	61.6541	ananas_comosus	Aco001788.1.mrna1	83.4783	71.3043
AT4G16265	arabidopsis_thaliana	AT4G16265.2	45.8647	36.8421	ananas_comosus	Aco009500.1.mrna1	69.3182	55.6818
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	arabidopsis_lyrata	fgenesh2_kg.7__2692__AT4G16265.1	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.1654	quercus_lobata	QL06p011635:mrna	85.0877	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	65.4135	lupinus_angustifolius	OIV95924	85.9649	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	66.9173	59.3985	lupinus_angustifolius	OIW19858	80.1802	71.1712
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	77.4436	eutrema_salsugineum	ESQ55824	92.9825	90.3509
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	arabidopsis_halleri	g23111.t1	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	64.6617	51.1278	cajanus_cajan	C.cajan_04083.t	64.6617	51.1278
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	55.6391	cajanus_cajan	C.cajan_04081.t	79.8246	64.9123
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	65.4135	cajanus_cajan	C.cajan_39458.t	84.2105	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	solanum_tuberosum	PGSC0003DMT400069978	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	64.6617	setaria_viridis	TKW28780	80.7018	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	43.609	setaria_viridis	TKW35805	68.4211	50.8772
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	59.3985	setaria_viridis	TKW03557	79.8246	69.2982
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.1579	setaria_viridis	TKV91567	81.7391	73.0435
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_nivara	ONIVA12G14460.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_nivara	ONIVA07G20670.1	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.9173	ipomoea_triloba	itb01g35720.t1	85.0877	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	57.8947	oryza_glumipatula	OGLUM03G00200.2	66.9118	56.6176
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_glumipatula	OGLUM07G22060.1	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_glumipatula	OGLUM12G17270.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	63.1579	52.6316	zea_mays	Zm00001eb138580_P001	32.4324	27.027
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	51.8797	zea_mays	Zm00001eb230190_P001	50	44.2308
AT4G16265	arabidopsis_thaliana	AT4G16265.2	67.6692	58.6466	zea_mays	Zm00001eb088460_P001	78.9474	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	43.609	zea_mays	Zm00001eb327460_P005	54.9296	40.8451
AT4G16265	arabidopsis_thaliana	AT4G16265.2	59.3985	52.6316	zea_mays	Zm00001eb086380_P001	53.3784	47.2973
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	68.4211	sesamum_indicum	SIN_1016183.t	85.9649	79.8246
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	45.1128	lolium_perenne	cds.KYUSt_chr4.53236	57.8947	45.1128
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.1654	lolium_perenne	cds.KYUSt_chr5.7858	22.5653	20.9026
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	arabis_alpina	KFK36124	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	60.1504	49.6241	ciona_savignyi	ENSCSAVP00000018059	63.4921	52.381
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_juncea	cds.BjuA08g10570S	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_juncea	cds.BjuB02g07320S	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	57.1429	oryza_brachyantha	OB03G10270.1	80.7018	66.6667
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	44.3609	oryza_brachyantha	OB07G27720.1	66.6667	51.7544
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.9173	oryza_brachyantha	OB12G22580.1	83.3333	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	63.9098	glycine_max	KRH36994	85.9649	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	63.1579	glycine_max	KRH11971	83.3333	73.6842
AT4G16265	arabidopsis_thaliana	AT4G16265.2	66.9173	52.6316	glycine_max	KRH50750	78.0702	61.4035
AT4G16265	arabidopsis_thaliana	AT4G16265.2	50.3759	37.594	cyanidioschyzon_merolae	CMG169CT	54.0323	40.3226
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.9398	66.1654	corymbia_citriodora	cds-KAF8016292.1	61.2121	53.3333
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	66.1654	aegilops_tauschii	AET5Gv20242800.3	68.6131	64.2336
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	63.9098	aegilops_tauschii	AET4Gv20847700.2	67.5862	58.6207
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.1353	39.8496	aegilops_tauschii	AET2Gv20351900.2	68.5714	50.4762
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	39.8496	triticum_urartu	TuG1812G0200001828.01.T01	64.0351	46.4912
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_longistaminata	KN539268.1_FGP007	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	65.4135	avena_sativa_sang	AVESA.00010b.r2.5CG0917740.1.CDS	81.5789	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.1053	avena_sativa_sang	AVESA.00010b.r2.2CG0267810.1.CDS	66.6667	49.1228
AT4G16265	arabidopsis_thaliana	AT4G16265.2	55.6391	40.6015	avena_sativa_sang	AVESA.00010b.r2.4CG1266970.1.CDS	64.9123	47.3684
AT4G16265	arabidopsis_thaliana	AT4G16265.2	67.6692	57.8947	avena_sativa_sang	AVESA.00010b.r2.4AG0631540.1.CDS	78.9474	67.5439
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	58.6466	avena_sativa_sang	AVESA.00010b.r2.1DG0120880.1.CDS	79.8246	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	57.1429	avena_sativa_sang	AVESA.00010b.r2.1DG0120960.1.CDS	79.8246	66.6667
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	58.6466	avena_sativa_sang	AVESA.00010b.r2.4CG1268700.1.CDS	79.8246	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	65.4135	avena_sativa_sang	AVESA.00010b.r2.5DG0989530.1.CDS	81.5789	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	67.6692	58.6466	avena_sativa_sang	AVESA.00010b.r2.4CG1268660.1.CDS	78.9474	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	60.1504	avena_sativa_sang	AVESA.00010b.r2.2AG0212980.1.CDS	70.4545	60.6061
AT4G16265	arabidopsis_thaliana	AT4G16265.2	66.9173	58.6466	avena_sativa_sang	AVESA.00010b.r2.2DG0337300.1.CDS	78.0702	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	56.391	41.3534	avena_sativa_sang	AVESA.00010b.r2.6AG1056760.1.CDS	65.7895	48.2456
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	65.4135	avena_sativa_sang	AVESA.00010b.r2.5AG0819180.1.CDS	81.5789	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	57.8947	avena_sativa_sang	AVESA.00010b.r2.4AG0631510.1.CDS	80.7018	67.5439
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	59.3985	avena_sativa_sang	AVESA.00010b.r2.2CG0291620.1.CDS	80.7018	69.2982
AT4G16265	arabidopsis_thaliana	AT4G16265.2	63.9098	52.6316	musa_acuminata	Ma04_p30550.1	63.4328	52.2388
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	64.6617	musa_acuminata	Ma10_p02680.1	85.0877	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	63.9098	musa_acuminata	Ma07_p05720.3	76	68
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	59.3985	musa_acuminata	Ma04_p20190.1	80	68.6957
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	57.8947	oryza_glaberrima	ORGLA03G0000900.1	66.9118	56.6176
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_glaberrima	ORGLA12G0137600.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_glaberrima	ORGLA11G0215500.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_glaberrima	ORGLA07G0170300.1	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	56.391	40.6015	triticum_turgidum	TRITD2Bv1G066000.1	65.7895	47.3684
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_turgidum	TRITD5Av1G047720.2	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_turgidum	TRITD5Bv1G044630.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	39.8496	triticum_turgidum	TRITD2Av1G054330.1	64.0351	46.4912
AT4G16265	arabidopsis_thaliana	AT4G16265.2	64.6617	57.1429	triticum_turgidum	TRITD4Bv1G202370.1	78.1818	69.0909
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	66.9173	panicum_hallii	PUZ67444	82.4561	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.1579	panicum_hallii	PUZ45779	81.7391	73.0435
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	60.1504	panicum_hallii	PUZ46483	80.7018	70.1754
AT4G16265	arabidopsis_thaliana	AT4G16265.2	60.1504	43.609	panicum_hallii	PUZ72902	47.3373	34.3195
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.8571	echinochloa_crusgalli	scaffold67.340.cds	66.6667	50
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	43.609	echinochloa_crusgalli	scaffold2.467.cds	50.9804	37.9085
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	64.6617	echinochloa_crusgalli	scaffold76.21.cds	80.7018	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	65.4135	echinochloa_crusgalli	scaffold240.41.cds	67.8322	60.8392
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.8571	echinochloa_crusgalli	scaffold302.80.cds	66.6667	50
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.1579	echinochloa_crusgalli	scaffold519.1.cds	81.7391	73.0435
AT4G16265	arabidopsis_thaliana	AT4G16265.2	42.8571	36.8421	echinochloa_crusgalli	scaffold133.176.cds	76	65.3333
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	65.4135	echinochloa_crusgalli	scaffold29.400.cds	67.8322	60.8392
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	66.1654	actinidia_chinensis	PSS01533	85.9649	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	66.1654	actinidia_chinensis	PSR85084	85.9649	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	69.9248	citrus_clementina	ESR32647	86.8421	81.5789
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	57.8947	oryza_indica	BGIOSGA011654-PA	79.8246	67.5439
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_indica	BGIOSGA037590-PA	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	65.4135	selaginella_moellendorffii	EFJ22675	84.3478	75.6522
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	65.4135	selaginella_moellendorffii	EFJ11827	84.3478	75.6522
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	65.4135	selaginella_moellendorffii	EFJ37302	86.8421	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	65.4135	selaginella_moellendorffii	EFJ27645	86.8421	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	57.8947	oryza_sativa	Os03t0102200-01	79.8246	67.5439
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	66.9173	oryza_sativa	Os12t0560400-01	89.4231	85.5769
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_sativa	Os07t0615800-00	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	61.6541	48.1203	homo_sapiens	ENSP00000221859	65.6	51.2
AT4G16265	arabidopsis_thaliana	AT4G16265.2	56.391	40.6015	triticum_aestivum	TraesCS2B02G195100.1	65.7895	47.3684
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	62.406	triticum_aestivum	TraesCS4B02G374000.1	82.4561	72.807
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	39.8496	triticum_aestivum	TraesCS2A02G168800.1	64.0351	46.4912
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	39.8496	triticum_aestivum	TraesCS2D02G176400.1	64.0351	46.4912
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_aestivum	TraesCS5B02G095100.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.9098	triticum_aestivum	TraesCS5A02G540000.1	82.4561	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_aestivum	TraesCS5A02G089100.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_aestivum	TraesCS5D02G101200.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_rufipogon	ORUFI07G23190.1	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_rufipogon	ORUFI12G17470.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	55.6391	40.6015	secale_cereale	SECCE2Rv1G0082520.1	64.9123	47.3684
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.1579	secale_cereale	SECCE5Rv1G0373760.1	82.4561	73.6842
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	secale_cereale	SECCE5Rv1G0309620.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	67.6692	gossypium_raimondii	KJB12663	85.0877	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	67.6692	helianthus_annuus	mRNA:HanXRQr2_Chr05g0217721	86.8421	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.9173	oryza_punctata	OPUNC12G14110.1	83.3333	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.8571	oryza_punctata	OPUNC07G20720.1	65.5172	49.1379
AT4G16265	arabidopsis_thaliana	AT4G16265.2	49.6241	46.6165	eragrostis_tef	Et_8B_060300.CDS	81.4815	76.5432
AT4G16265	arabidopsis_thaliana	AT4G16265.2	63.1579	54.8872	eragrostis_tef	Et_6A_047160.CDS	38.7097	33.6406
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	59.3985	eragrostis_tef	Et_4B_036622.CDS	81.5789	69.2982
AT4G16265	arabidopsis_thaliana	AT4G16265.2	65.4135	57.1429	eragrostis_tef	Et_7A_050791.CDS	56.4935	49.3507
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	62.406	eragrostis_tef	Et_3A_025521.CDS	84.2105	72.807
AT4G16265	arabidopsis_thaliana	AT4G16265.2	63.9098	56.391	eragrostis_tef	Et_8A_057939.CDS	17.4538	15.4004
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.8571	eragrostis_tef	Et_5B_044588.CDS	66.6667	50
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.9098	eragrostis_tef	Et_5A_042235.CDS	82.4561	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.9173	eragrostis_tef	Et_10A_001642.CDS	41.5966	37.395
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	42.8571	eragrostis_tef	Et_5A_041923.CDS	66.6667	50
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	63.1579	eragrostis_tef	Et_10B_004385.CDS	82.8829	75.6757
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	60.1504	eragrostis_tef	Et_3B_029865.CDS	82.4561	70.1754
AT4G16265	arabidopsis_thaliana	AT4G16265.2	50.3759	43.609	eragrostis_tef	Et_6B_049930.CDS	62.6168	54.2056
AT4G16265	arabidopsis_thaliana	AT4G16265.2	50.3759	43.609	eragrostis_tef	Et_6A_047961.CDS	62.6168	54.2056
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	67.6692	medicago_truncatula	AES65028	86.8421	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	65.4135	saccharum_spontaneum	Sspon.02G0055080-2D-mRNA-1:cds	83.3333	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	66.9173	60.1504	saccharum_spontaneum	Sspon.06G0027090-2C-mRNA-1:cds	80.1802	72.0721
AT4G16265	arabidopsis_thaliana	AT4G16265.2	53.3835	46.6165	saccharum_spontaneum	Sspon.07G0023260-1B-mRNA-1:cds	57.7236	50.4065
AT4G16265	arabidopsis_thaliana	AT4G16265.2	65.4135	57.8947	saccharum_spontaneum	Sspon.06G0027090-1B-mRNA-1:cds	82.8571	73.3333
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.1654	sorghum_bicolor	EES17194	83.3333	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	60.9023	sorghum_bicolor	KXG29100	79.1304	70.4348
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	43.609	sorghum_bicolor	OQU90254	67.5439	50.8772
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	57.8947	sorghum_bicolor	EES19658	80.7018	67.5439
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	58.6466	sorghum_bicolor	EES11806	79.8246	68.4211
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	65.4135	triticum_dicoccoides	TRIDC5AG076550.1	69.0648	62.5899
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	40.6015	triticum_dicoccoides	TRIDC2AG021400.2	58.6466	40.6015
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	40.6015	triticum_dicoccoides	TRIDC2BG025420.1	51.3158	35.5263
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_dicoccoides	TRIDC5BG015730.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	triticum_dicoccoides	TRIDC5AG013640.1	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	66.9173	coffea_canephora	CDO98778	85.9649	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	65.4135	manihot_esculenta	OAY27664	85.9649	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	68.4211	kalanchoe_fedtschenkoi	Kaladp0066s0011.1.v1.1	76.378	71.6535
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	67.6692	kalanchoe_fedtschenkoi	Kaladp0068s0247.1.v1.1	84.2105	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	67.6692	trifolium_pratense	Tp57577_TGAC_v2_mRNA5953	86.8421	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	54.8872	46.6165	trifolium_pratense	Tp57577_TGAC_v2_mRNA11263	82.9545	70.4545
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	72.1805	brassica_rapa_ro18	A01p022960.1_BraROA.1	97.9592	97.9592
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_rapa_ro18	A08p018490.1_BraROA.1	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	53.3835	45.8647	eucalyptus_grandis	KCW59945	82.5581	70.9302
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.9398	64.6617	eucalyptus_grandis	KCW59940	57.7143	49.1429
AT4G16265	arabidopsis_thaliana	AT4G16265.2	51.1278	44.3609	dioscorea_rotundata	DRNTG_19110.1	85	73.75
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	62.406	dioscorea_rotundata	DRNTG_27533.1	83.3333	72.807
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	66.9173	prunus_persica	ONI28081	87.7193	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	60.9023	50.3759	chenopodium_quinoa	AUR62041403-RA:cds	61.3636	50.7576
AT4G16265	arabidopsis_thaliana	AT4G16265.2	62.406	54.1353	digitaria_exilis	Dexi7B01G0023630.1:cds	80.5825	69.9029
AT4G16265	arabidopsis_thaliana	AT4G16265.2	62.406	54.1353	digitaria_exilis	Dexi7A01G0022920.1:cds	80.5825	69.9029
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.1654	digitaria_exilis	Dexi3B01G0033790.1:cds	83.3333	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	44.3609	37.594	digitaria_exilis	DexiUA01G0023200.1:cds	75.641	64.1026
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	65.4135	digitaria_exilis	Dexi3A01G0032310.1:cds	82.4561	76.3158
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.9248	57.8947	oryza_barthii	OBART03G00260.2	60	49.6774
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_barthii	OBART12G15730.1	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.8947	42.1053	oryza_barthii	OBART07G22160.2	66.3793	48.2759
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_oleracea	Bo8g043510.1	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	78.1955	brassica_oleracea	Bo1g054930.1	92.1053	91.2281
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	66.9173	prunus_dulcis	VVA24621	87.7193	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	55.6391	48.8722	corylus_avellana	Cav01g13590.t1	91.358	80.2469
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	61.6541	leersia_perrieri	LPERR11G18860.2	81.982	73.8739
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	66.9173	leersia_perrieri	LPERR12G12900.2	83.3333	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	56.391	43.609	leersia_perrieri	LPERR07G19240.1	68.1818	52.7273
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.9173	olea_europaea	OE9A077769C1	85.0877	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.9173	olea_europaea	OE9A099906C1	85.0877	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	49.6241	36.0902	saccharomyces_cerevisiae	YGL070C	54.0984	39.3443
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	68.4211	pistacia_vera	cds-EVM0001884.1	83.4783	79.1304
AT4G16265	arabidopsis_thaliana	AT4G16265.2	60.9023	48.8722	drosophila_melanogaster	FBpp0312065	62.7907	50.3876
AT4G16265	arabidopsis_thaliana	AT4G16265.2	65.4135	59.3985	brassica_napus	CDY32231	75.6522	68.6957
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_napus	CDY72355	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	78.9474	76.6917	brassica_napus	CDY42543	92.1053	89.4737
AT4G16265	arabidopsis_thaliana	AT4G16265.2	57.1429	43.609	oryza_meridionalis	OMERI07G18500.1	48.4076	36.9427
AT4G16265	arabidopsis_thaliana	AT4G16265.2	71.4286	67.6692	oryza_meridionalis	OMERI02G09430.2	83.3333	78.9474
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	camelina_sativa	Csa10g029500.1	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	camelina_sativa	Csa11g033780.1	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	79.6992	78.9474	camelina_sativa	Csa12g051980.1	92.9825	92.1053
AT4G16265	arabidopsis_thaliana	AT4G16265.2	73.6842	69.1729	malus_domestica_golden	mRNA:MD16G0139000	85.9649	80.7018
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	66.9173	daucus_carota	KZM86213	85.0877	78.0702
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	60.9023	daucus_carota	KZM85570	50.838	45.2514
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	68.4211	rosa_chinensis	PRQ39385	87.7193	79.8246
AT4G16265	arabidopsis_thaliana	AT4G16265.2	75.188	69.1729	juglans_regia	cds.Jr12_10450_p1	87.7193	80.7018
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	64.6617	juglans_regia	cds.Jr07_11460_p1	85.7143	76.7857
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.9323	64.6617	vigna_angularis	KOM29149	85.0877	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	68.4211	59.3985	setaria_italica	KQK96645	79.8246	69.2982
AT4G16265	arabidopsis_thaliana	AT4G16265.2	69.1729	64.6617	setaria_italica	KQL16610	80.7018	75.4386
AT4G16265	arabidopsis_thaliana	AT4G16265.2	58.6466	43.609	setaria_italica	KQL26654	68.4211	50.8772
AT4G16265	arabidopsis_thaliana	AT4G16265.2	70.6767	63.1579	setaria_italica	KQK87296	81.7391	73.0435
AT4G16265	arabidopsis_thaliana	AT4G16265.2	72.1805	63.9098	physcomitrium_patens	Pp3c18_17910V3.2	84.2105	74.5614
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	66.1654	vitis_vinifera	Vitvi05g00105_P001	86.8421	77.193
AT4G16265	arabidopsis_thaliana	AT4G16265.2	74.4361	67.6692	cynara_cardunculus	KVH87674	86.8421	78.9474

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000418	part_of RNA polymerase IV complex	1	IDA	Arabidopsis_thaliana(3702)	Component
GO:0000419	part_of RNA polymerase V complex	1	IDA	Arabidopsis_thaliana(3702)	Component
GO:0003676	enables nucleic acid binding	1	IEA	Arabidopsis_thaliana(3702)	Function
GO:0003899	enables DNA-directed 5-3 RNA polymerase activity	1	IEA	Arabidopsis_thaliana(3702)	Function
GO:0005634	located_in nucleus	1	ISM	Arabidopsis_thaliana(3702)	Component
GO:0005665	part_of RNA polymerase II, core complex	1	IDA	Arabidopsis_thaliana(3702)	Component
GO:0006351	involved_in DNA-templated transcription	1	IEA	Arabidopsis_thaliana(3702)	Process
GO:0008270	enables zinc ion binding	1	IEA	Arabidopsis_thaliana(3702)	Function
GO:0080188	acts_upstream_of_or_within gene silencing by RNA-directed DNA methylation	1	IMP	Arabidopsis_thaliana(3702)	Process

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression