RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	AT3G60240	Gene ID	825194	Accession	-
Symbol	EIF4G	Alias	-	Full Name	eukaryotic translation initiation factor 4G
Status	Confidence	Length	6849 bases	Strand	Plus strand
Position	3 : 22261648 - 22268496	RNA binding domain	MIF4G , MA3
Summary	N.A.

RNA binding domains (RBDs)

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Protein	Domain	Pfam ID	E-value	Domain number
AT3G60240	MA3	PF02847	1e-10	1
AT3G60240	MA3	PF02847	1e-10	2
AT3G60240	MA3	PF02847	1e-10	3
AT3G60240	MIF4G	PF02854	4.3e-50	4
AT3G60240	MIF4G	PF02854	4.3e-50	5
AT3G60240	MIF4G	PF02854	4.3e-50	6

Showing 1 to 6 of 6 entries

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID
EIF4G-201	AT3G60240	5573	1725aa	AT3G60240

Showing 1 to 1 of 1 entries

Gene Model

Click here to download AT3G60240's gene model file

Protein-Protein Interaction (PPI)

Click here to download AT3G60240's PPI file

Paralogs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT3G60240	arabidopsis_thaliana	AT5G57870.1	47.0513	29.8718	arabidopsis_thaliana	AT3G60240.4	21.2507	13.4916
AT3G60240	arabidopsis_thaliana	AT1G62410.1	52.0179	34.5291	arabidopsis_thaliana	AT3G60240.4	6.71685	4.4586
AT3G60240	arabidopsis_thaliana	AT2G24050.1	46.988	29.3173	arabidopsis_thaliana	AT3G60240.4	20.3243	12.6809
AT3G60240	arabidopsis_thaliana	AT4G30680.1	39.924	23.5741	arabidopsis_thaliana	AT3G60240.4	6.07991	3.59004

Showing 1 to 4 of 4 entries

Orthologs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT3G60240	arabidopsis_thaliana	AT3G60240.4	49.7973	35.2056	marchantia_polymorpha	PTQ38407	32.7121	23.1267
AT3G60240	arabidopsis_thaliana	AT3G60240.4	31.0944	25.4198	papaver_somniferum	RZC74532	71.7914	58.6898
AT3G60240	arabidopsis_thaliana	AT3G60240.4	54.6034	42.4435	papaver_somniferum	RZC69274	53.6405	41.6951
AT3G60240	arabidopsis_thaliana	AT3G60240.4	59.2357	45.9178	cannabis_sativa_female	cds.evm.model.01.1507	55.9934	43.4045
AT3G60240	arabidopsis_thaliana	AT3G60240.4	44.8755	34.337	ficus_carica	FCD_00031873-RA:cds	55.0426	42.1165
AT3G60240	arabidopsis_thaliana	AT3G60240.4	57.1511	44.5281	ficus_carica	FCD_00034316-RA:cds	56.5616	44.0688
AT3G60240	arabidopsis_thaliana	AT3G60240.4	65.1419	51.8819	theobroma_cacao	EOX96557	60	47.7867
AT3G60240	arabidopsis_thaliana	AT3G60240.4	57.3248	42.9068	beta_vulgaris	KMT04399	54.7566	40.9845
AT3G60240	arabidopsis_thaliana	AT3G60240.4	53.4453	40.4748	beta_vulgaris	KMS99891	53.5383	40.5452
AT3G60240	arabidopsis_thaliana	AT3G60240.4	59.8726	46.1494	cucumis_melo	MELO3C020380.2.1	54.5646	42.058

Showing 1 to 10 of 189 entries

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Gene Ontology

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Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003729	enables mRNA binding	2	HDA,IDA	Arabidopsis_thaliana(3702)	Function
GO:0003723	enables RNA binding	1	IEA	Arabidopsis_thaliana(3702)	Function
GO:0003743	enables translation initiation factor activity	1	ISS	Arabidopsis_thaliana(3702)	Function
GO:0005576	located_in extracellular region	1	ISM	Arabidopsis_thaliana(3702)	Component
GO:0005737	located_in cytoplasm	1	ISM	Arabidopsis_thaliana(3702)	Component
GO:0009615	acts_upstream_of_or_within response to virus	1	IMP	Arabidopsis_thaliana(3702)	Process

Showing 1 to 6 of 6 entries

Contents

Description
RBDs
Transcripts
Gene Model
PPI
Paralogs
Orthologs
Gene Ontology