RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	AT3G22230	Gene ID	821787	Accession	-
Symbol	AT3G22230	Alias	-	Full Name	Ribosomal L27e protein family
Status	Confidence	Length	1062 bases	Strand	Minus strand
Position	3 : 7843536 - 7844597	RNA binding domain	Ribosomal_L27e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
AT3G22230	Ribosomal_L27e	PF01777	3.5e-31	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
AT3G22230-201	AT3G22230	1062	135aa	AT3G22230

Gene Model

Click here to download AT3G22230's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download AT3G22230's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT3G22230	arabidopsis_thaliana	AT4G15000.1	97.037	96.2963	arabidopsis_thaliana	AT3G22230.1	97.037	96.2963
AT3G22230	arabidopsis_thaliana	AT2G32220.1	91.8519	83.7037	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AT3G22230	arabidopsis_thaliana	AT3G22230.1	70.3704	51.8519	chondrus_crispus	CDF33494	65.9722	48.6111
AT3G22230	arabidopsis_thaliana	AT3G22230.1	76.2963	65.1852	chlamydomonas_reinhardtii	PNW70002	76.2963	65.1852
AT3G22230	arabidopsis_thaliana	AT3G22230.1	80.7407	70.3704	marchantia_polymorpha	PTQ44517	80.7407	70.3704
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	78.5185	papaver_somniferum	RZC48260	17.6119	15.8209
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	66.6667	papaver_somniferum	RZC61129	83.2	72
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	papaver_somniferum	RZC45784	89.6296	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	69.6296	64.4444	cannabis_sativa_female	cds.evm.model.06.36	93.0693	86.1386
AT3G22230	arabidopsis_thaliana	AT3G22230.1	51.1111	44.4444	cannabis_sativa_female	cds.evm.model.02.1446	67.6471	58.8235
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	85.9259	cannabis_sativa_female	cds.evm.model.04.46	93.3333	85.9259
AT3G22230	arabidopsis_thaliana	AT3G22230.1	45.1852	40	cannabis_sativa_female	cds.evm.model.02.1514	51.2605	45.3782
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	78.5185	theobroma_cacao	EOX92474	88.8889	78.5185
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	85.1852	theobroma_cacao	EOX93172	92.5926	85.1852
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	78.5185	beta_vulgaris	KMS95098	90.3704	78.5185
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	76.2963	beta_vulgaris	KMS96250	88.1481	76.2963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	83.7037	cucumis_melo	MELO3C016201.2.1	93.3333	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	83.7037	cucumis_melo	MELO3C016199.2.1	93.3333	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	77.7778	cucumis_melo	MELO3C026403.2.1	88.8889	77.7778
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	76.2963	cucumis_sativus	KGN44160	88.1481	76.2963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	75.5556	cucumis_sativus	KGN54977	88.1481	75.5556
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	84.4444	cucumis_sativus	KGN53500	93.3333	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	82.963	cucumis_sativus	KGN53499	93.3333	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	populus_trichocarpa	Potri.001G342500.1.v4.1	91.8519	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	populus_trichocarpa	Potri.006G021500.4.v4.1	90.3704	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	83.7037	populus_trichocarpa	Potri.016G019000.1.v4.1	91.1111	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	solanum_lycopersicum	Solyc06g073300.1.1.1	89.6296	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	solanum_lycopersicum	Solyc07g043360.1.1.1	90.3704	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	71.1111	58.5185	solanum_lycopersicum	Solyc04g057860.2.1	60.3774	49.6855
AT3G22230	arabidopsis_thaliana	AT3G22230.1	74.0741	52.5926	caenorhabditis_elegans	C53H9.1.1	73.5294	52.2059
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80	lactuca_sativa	cds-PLY86359.1	91.1111	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80.7407	lactuca_sativa	cds-PLY78312.1	91.1111	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	75.5556	68.1481	ostreococcus_lucimarinus	ABO95935	75.5556	68.1481
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	79.2593	citrullus_lanatus	Cla97C11G222720.1	89.6296	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	84.4444	citrullus_lanatus	Cla97C07G137620.1	93.3333	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	78.5185	vigna_radiata	Vradi07g09610.1	62.3037	55.4974
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	82.963	vigna_radiata	Vradi05g01510.1	74.8466	68.7117
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	78.5185	amborella_trichopoda	ERN01998	88.8889	78.5185
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80.7407	amborella_trichopoda	ERN14904	91.1111	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.2222	vigna_unguiculata	Vigun09g021100.1.v1.2	66.129	59.6774
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.963	vigna_unguiculata	Vigun09g021000.1.v1.2.CDS.1	91.8519	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	86.6667	77.037	vigna_unguiculata	Vigun03g151600.1.v1.2	73.5849	65.4088
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.2222	phaseolus_vulgaris	ESW10833	91.8519	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.963	phaseolus_vulgaris	ESW30879	91.1111	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	81.4815	asparagus_officinalis	ONK69142	91.8519	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	83.7037	pisum_sativum	Psat5g299640.1.cds1	91.1111	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	84.4444	pisum_sativum	Psat3g090120.1.cds1	91.8519	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	86.6667	pisum_sativum	Psat3g194840.1.cds1	92.5926	86.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	84.4444	pisum_sativum	Psat3g090160.1.cds1	91.8519	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	82.2222	brachypodium_distachyon	KQK16723	88.3212	81.0219
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	85.9259	quercus_suber	cds-POE99581.1	93.3333	85.9259
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	85.1852	quercus_suber	cds-POE99578.1	79.6178	73.2484
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	78.5185	quercus_suber	cds-POF20453.1	74.5342	65.8385
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	83.7037	quercus_suber	cds-POF26791.1	93.3333	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	67.4074	54.8148	ananas_comosus	Aco004436.1.mrna1	69.4657	56.4885
AT3G22230	arabidopsis_thaliana	AT3G22230.1	100	100	arabidopsis_lyrata	fgenesh2_kg.3__2437__AT3G22230.1	100	100
AT3G22230	arabidopsis_thaliana	AT3G22230.1	62.963	60.7407	arabidopsis_lyrata	scaffold_302657.1	97.7011	94.2529
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	83.7037	quercus_lobata	QL10p001864:mrna:CDS:1	92.5926	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	85.1852	quercus_lobata	QL11p054648:mrna:CDS:1	91.8519	85.1852
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	79.2593	capsicum_annuum	PHT80482	88.1481	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	82.963	72.5926	capsicum_annuum	PHT75661	82.3529	72.0588
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	79.2593	capsicum_annuum	PHT79925	87.4074	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	62.2222	55.5556	capsicum_annuum	PHT92340	77.7778	69.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	84.4444	lupinus_angustifolius	OIW14256	91.1111	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	84.4444	lupinus_angustifolius	OIV91646	91.1111	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	85.9259	lupinus_angustifolius	OIW21526	92.5926	85.9259
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	84.4444	lupinus_angustifolius	OIV92044	91.1111	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	85.1852	lupinus_angustifolius	OIW00671	91.8519	85.1852
AT3G22230	arabidopsis_thaliana	AT3G22230.1	97.037	94.8148	eutrema_salsugineum	ESQ47649	97.037	94.8148
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	cajanus_cajan	C.cajan_26784.t.cds1	91.8519	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	83.7037	cajanus_cajan	C.cajan_16391.t.cds1	92.5926	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	49.6296	40	solanum_tuberosum	PGSC0003DMT400059840	56.7797	45.7627
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	solanum_tuberosum	PGSC0003DMT400030651	90.3704	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	73.3333	65.1852	solanum_tuberosum	PGSC0003DMT400061374	81.1475	72.1311
AT3G22230	arabidopsis_thaliana	AT3G22230.1	65.9259	52.5926	solanum_tuberosum	PGSC0003DMT400010758	40.0901	31.982
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	solanum_tuberosum	PGSC0003DMT400069185	89.6296	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	setaria_viridis	TKW21561	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	setaria_viridis	TKW26550	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_nivara	ONIVA10G21300.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_nivara	ONIVA09G16420.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	80.7407	ipomoea_triloba	itb06g18770.t1	84.1379	75.1724
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	77.7778	ipomoea_triloba	itb11g21220.t1	87.4074	77.7778
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	79.2593	ipomoea_triloba	itb01g26870.t1	89.6296	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_glumipatula	OGLUM10G18870.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_glumipatula	OGLUM02G12350.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	zea_mays	Zm00001eb273670_P001	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	81.4815	zea_mays	Zm00001eb224520_P001	46.1538	42.3077
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	zea_mays	Zm00001eb431270_P001	88.3212	79.562
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	zea_mays	Zm00001eb070200_P001	72.4551	65.2695
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	78.5185	sesamum_indicum	SIN_1003163.t.cds1	88.8889	78.5185
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	81.4815	sesamum_indicum	SIN_1014250.t.cds1	88.8889	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	81.4815	sesamum_indicum	SIN_1014243.t.cds1	88.8889	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	80	lolium_perenne	cds.KYUSt_chr7.1374	87.5912	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	lolium_perenne	cds.KYUSt_chr7.14906	89.0511	80.292
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	63.7037	chara_braunii	GBG70246	77.037	63.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	79.2593	66.6667	chara_braunii	GBG90910	79.2593	66.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	97.037	94.0741	arabis_alpina	KFK22901	97.037	94.0741
AT3G22230	arabidopsis_thaliana	AT3G22230.1	75.5556	52.5926	ciona_savignyi	ENSCSAVP00000012731	75	52.2059
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	93.3333	brassica_juncea	cds.BjuA01g12130S	96.2963	93.3333
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	93.3333	brassica_juncea	cds.BjuB07g41150S	80.7453	78.2609
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	92.5926	brassica_juncea	cds.BjuA03g21920S	96.2963	92.5926
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	93.3333	brassica_juncea	cds.BjuA05g22960S	96.2963	93.3333
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	92.5926	brassica_juncea	cds.BjuB07g26960S	96.2963	92.5926
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	oryza_brachyantha	OB10G21700.1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	75.5556	oryza_brachyantha	OB06G21720.1	88.0597	76.1194
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.2222	glycine_max	KRH58515	91.8519	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	glycine_max	KRH42396	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.2222	glycine_max	KRH12192	92.5926	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	49.6296	46.6667	glycine_max	KRH17283	81.7073	76.8293
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	glycine_max	KRH37213	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	69.6296	45.9259	cyanidioschyzon_merolae	CML305CT	64.8276	42.7586
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.2222	corymbia_citriodora	cds-KAF8032171.1	91.1111	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	corymbia_citriodora	cds-KAF8029259.1	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	corymbia_citriodora	cds-KAF8029261.1	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	corymbia_citriodora	cds-KAF8029274.1	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	corymbia_citriodora	cds-KAF8029272.1	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	aegilops_tauschii	AET7Gv21282800.2	73.3333	68.4848
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	aegilops_tauschii	AET7Gv20847100.1	85.8156	75.1773
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_urartu	TuG1812G0700003644.01.T01.cds302694	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	61.4815	54.0741	oryza_longistaminata	KN543251.1_FGP002	86.4583	76.0417
AT3G22230	arabidopsis_thaliana	AT3G22230.1	62.2222	54.8148	oryza_longistaminata	AMDW01040306.1_FGP001	90.3226	79.5699
AT3G22230	arabidopsis_thaliana	AT3G22230.1	68.8889	60	fraxinus_excelsior	FRAEX38873_v2_000010020.1.cds	89.4231	77.8846
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80	fraxinus_excelsior	FRAEX38873_v2_000349630.1.cds1	91.1111	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.963	fraxinus_excelsior	FRAEX38873_v2_000310570.1.cds1	92.5926	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.963	fraxinus_excelsior	FRAEX38873_v2_000138790.1.cds	56.8182	50.9091
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	81.4815	fraxinus_excelsior	FRAEX38873_v2_000189490.1.cds	85.034	74.8299
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	77.037	fraxinus_excelsior	FRAEX38873_v2_000032330.1.cds1	88.1481	77.037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	avena_sativa_sang	AVESA.00010b.r2.7AG1245770.1.CDS.1	88.3212	80.292
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	avena_sativa_sang	AVESA.00010b.r2.4CG1288250.1.CDS.1	89.0511	80.292
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	80	avena_sativa_sang	AVESA.00010b.r2.6CG1147680.1.CDS.1	86.1314	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	87.4074	80	avena_sativa_sang	AVESA.00010b.r2.2AG0260350.1.CDS.1	86.1314	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	79.2593	musa_acuminata	Ma04_p15270.1	92.5926	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	82.963	musa_acuminata	Ma04_p10490.1	93.3333	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.2222	musa_acuminata	Ma07_p26580.1	92.5926	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	80.7407	musa_acuminata	Ma04_p08190.1	91.8519	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_glaberrima	ORGLA02G0111900.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_glaberrima	ORGLA10G0139300.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	triticum_turgidum	TRITD7Bv1G222180.1	88.3212	82.4818
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_turgidum	TRITD7Av1G176440.1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_turgidum	TRITD7Bv1G138270.1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	panicum_hallii	PUZ65386	52.381	46.7532
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	panicum_hallii	PUZ60590	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	80	echinochloa_crusgalli	scaffold38.335.cds	87.5912	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	echinochloa_crusgalli	scaffold75.78.cds	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	echinochloa_crusgalli	scaffold12.323.cds	88.3212	79.562
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	echinochloa_crusgalli	scaffold343.14.cds	58.1731	52.4038
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	echinochloa_crusgalli	scaffold93.226.cds	88.3212	79.562
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	echinochloa_crusgalli	scaffold39.205.cds	88.3212	79.562
AT3G22230	arabidopsis_thaliana	AT3G22230.1	94.0741	83.7037	actinidia_chinensis	PSS05585	94.0741	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	82.963	actinidia_chinensis	PSS14390	93.3333	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	50.3704	45.1852	citrus_clementina	ESR41524	83.9506	75.3086
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_indica	BGIOSGA031388-PA	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_indica	BGIOSGA006688-PA	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.7778	67.4074	selaginella_moellendorffii	EFJ06881	78.3582	67.9104
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.7778	67.4074	selaginella_moellendorffii	EFJ34825	78.3582	67.9104
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_sativa	Os10t0564300-01	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_sativa	Os02t0284600-01	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	71.8519	56.2963	homo_sapiens	ENSP00000253788	71.3235	55.8824
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	triticum_aestivum	TraesCS7B02G444400.1.cds1	88.3212	82.4818
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_aestivum	TraesCS7B02G243300.1.cds1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	triticum_aestivum	TraesCS7D02G515600.1.cds1	88.3212	82.4818
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	triticum_aestivum	TraesCS7A02G527600.1.cds1	88.3212	82.4818
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_aestivum	TraesCS7A02G331700.1.cds1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_rufipogon	ORUFI02G12610.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_rufipogon	ORUFI10G19980.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	82.963	secale_cereale	SECCE6Rv1G0451810.1.CDS.1	89.0511	81.7518
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	secale_cereale	SECCE7Rv1G0496930.1.CDS.1	88.3212	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	gossypium_raimondii	KJB42924	69.1429	62.2857
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	gossypium_raimondii	KJB22731	91.8519	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	94.0741	82.963	gossypium_raimondii	KJB75240	94.0741	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.2222	gossypium_raimondii	KJB08601	91.1111	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	85.1852	gossypium_raimondii	KJB07059	92.5926	85.1852
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	79.2593	helianthus_annuus	CDS:HanXRQr2_Chr05g0216991.1	88.1481	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	81.4815	helianthus_annuus	CDS:HanXRQr2_Chr07g0299791.1	91.0448	82.0896
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	80.7407	helianthus_annuus	CDS:HanXRQr2_Chr08g0329231.1	90.3704	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	79.2593	helianthus_annuus	CDS:HanXRQr2_Chr15g0715541.1	89.6296	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	85.1852	75.5556	helianthus_annuus	CDS:HanXRQr2_Chr10g0449931.1	83.9416	74.4526
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	oryza_punctata	OPUNC10G17210.1	88.9706	80.8824
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_punctata	OPUNC02G11140.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	82.963	eragrostis_tef	Et_1A_004706.CDS1	66.6667	61.2022
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	82.963	eragrostis_tef	Et_1B_009808.CDS1	89.7059	82.3529
AT3G22230	arabidopsis_thaliana	AT3G22230.1	86.6667	79.2593	eragrostis_tef	Et_7B_055589.CDS	67.2414	61.4943
AT3G22230	arabidopsis_thaliana	AT3G22230.1	86.6667	79.2593	eragrostis_tef	Et_7A_052821.CDS	73.125	66.875
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	86.6667	medicago_truncatula	AES65144	93.3333	86.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	85.9259	medicago_truncatula	AES63215	93.3333	85.9259
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	saccharum_spontaneum	Sspon.08G0003610-1A-mRNA-1:cds	54.7511	49.7738
AT3G22230	arabidopsis_thaliana	AT3G22230.1	85.1852	76.2963	saccharum_spontaneum	Sspon.08G0003610-2B-mRNA-1:cds	78.2313	70.068
AT3G22230	arabidopsis_thaliana	AT3G22230.1	86.6667	77.7778	saccharum_spontaneum	Sspon.08G0003610-3C-mRNA-1	33.1445	29.745
AT3G22230	arabidopsis_thaliana	AT3G22230.1	85.1852	74.8148	saccharum_spontaneum	Sspon.08G0003610-4D-mRNA-1:cds	77.7027	68.2432
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	sorghum_bicolor	KXG20637	53.0702	48.2456
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	sorghum_bicolor	EES11452	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	83.7037	triticum_dicoccoides	TRIDC7AG073720.1	75.625	70.625
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_dicoccoides	TRIDC7AG047500.1	77.5641	67.9487
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	78.5185	triticum_dicoccoides	TRIDC7BG040110.1	81.2081	71.1409
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	80.7407	coffea_canephora	CDP16031	90.3704	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	94.0741	84.4444	manihot_esculenta	OAY41086	94.0741	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	84.4444	manihot_esculenta	OAY43402	93.3333	84.4444
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.7778	65.9259	manihot_esculenta	OAY37298	83.3333	70.6349
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	79.2593	kalanchoe_fedtschenkoi	Kaladp0038s0079.1.v1.1.CDS.1	89.6296	79.2593
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	77.7778	kalanchoe_fedtschenkoi	Kaladp0630s0068.1.v1.1.CDS.1	90.3704	77.7778
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	trifolium_pratense	Tp57577_TGAC_v2_mRNA32923	69.2737	63.1285
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.963	trifolium_pratense	Tp57577_TGAC_v2_mRNA2192	81.5789	73.6842
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	80	eucalyptus_grandis	KCW73997	92.5926	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	80	eucalyptus_grandis	KCW73719	92.5926	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	81.4815	72.5926	eucalyptus_grandis	KCW73711	94.0171	83.7607
AT3G22230	arabidopsis_thaliana	AT3G22230.1	73.3333	65.1852	eucalyptus_grandis	KCW76743	56.25	50
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	80	dioscorea_rotundata	DRNTG_33792.1	62.3116	54.2714
AT3G22230	arabidopsis_thaliana	AT3G22230.1	62.963	57.037	dioscorea_rotundata	DRNTG_10767.1.cds1	87.6289	79.3814
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.2222	prunus_persica	ONI17936	91.8519	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	78.5185	chenopodium_quinoa	AUR62042607-RA:cds	18.683	16.2328
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	76.2963	chenopodium_quinoa	AUR62040781-RA:cds	74.8428	64.7799
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	digitaria_exilis	Dexi5B01G0001260.1:cds	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	digitaria_exilis	Dexi5A01G0001180.1:cds	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_barthii	OBART02G12470.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_barthii	OBART10G18790.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	92.5926	brassica_oleracea	Bo5g098200.1	96.2963	92.5926
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	93.3333	brassica_oleracea	Bo3g080050.1	96.2963	93.3333
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	93.3333	brassica_oleracea	Bo1g105320.1	96.2963	93.3333
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.2222	prunus_dulcis	VVA27851	91.8519	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	54.0741	galdieria_sulphuraria	EME28757	75.9124	53.2847
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	80	corylus_avellana	Cav05g25630.t1.cds1	91.8519	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	79.2593	leersia_perrieri	LPERR02G10460.1	87.5912	78.1022
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	78.5185	leersia_perrieri	LPERR06G13200.1	86.8613	77.3723
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	80	nicotiana_attenuata	OIT02991	88.8889	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	81.4815	nicotiana_attenuata	OIS98503	91.1111	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.963	olea_europaea	OE9A092045C1	92.5926	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	83.7037	olea_europaea	OE9A095114C1	64.1026	57.9487
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80.7407	olea_europaea	OE9A030033C1	91.1111	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	82.2222	67.4074	olea_europaea	OE9A025316C1	49.7758	40.8072
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	78.5185	olea_europaea	OE9A119398C1	88.8889	78.5185
AT3G22230	arabidopsis_thaliana	AT3G22230.1	72.5926	62.2222	olea_europaea	OE9A106474C1	73.1343	62.6866
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80.7407	olea_europaea	OE9A039533C1	91.1111	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	70.3704	51.1111	saccharomyces_cerevisiae	YHR010W	69.8529	50.7353
AT3G22230	arabidopsis_thaliana	AT3G22230.1	71.1111	51.8519	saccharomyces_cerevisiae	YDR471W	70.5882	51.4706
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	86.6667	pistacia_vera	cds-EVM0004929.1	92.5926	86.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	86.6667	pistacia_vera	cds-EVM0031120.1	92.5926	86.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	66.6667	50.3704	drosophila_melanogaster	FBpp0303780	66.6667	50.3704
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.8148	brassica_napus	CDY24288	95.4128	92.6606
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.8148	brassica_napus	CDX92934	95.4128	92.6606
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.8148	brassica_napus	CDY58747	95.4128	92.6606
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.0741	brassica_napus	CDY37397	95.4128	91.7431
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.8148	brassica_napus	CDY39508	95.4128	92.6606
AT3G22230	arabidopsis_thaliana	AT3G22230.1	77.037	74.8148	brassica_napus	CDY10627	95.4128	92.6606
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	83.7037	corchorus_capsularis	OMO95903	91.1111	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	oryza_meridionalis	OMERI02G13390.1	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80.7407	oryza_meridionalis	OMERI08G00150.1	88.9706	80.1471
AT3G22230	arabidopsis_thaliana	AT3G22230.1	97.037	94.0741	camelina_sativa	Csa15g034810.1.cds1	97.037	94.0741
AT3G22230	arabidopsis_thaliana	AT3G22230.1	96.2963	94.8148	camelina_sativa	Csa01g025450.1	82.8026	81.5287
AT3G22230	arabidopsis_thaliana	AT3G22230.1	97.037	94.8148	camelina_sativa	Csa19g031440.1.cds1	97.037	94.8148
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	82.2222	malus_domestica_golden	CDS:MD17G0112400.1	92.5926	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	82.2222	malus_domestica_golden	CDS:MD09G0119600.1	91.8519	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.963	malus_domestica_golden	CDS:MD10G0271200.1	91.1111	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	37.037	31.1111	malus_domestica_golden	CDS:MD07G0167300.1	90.9091	76.3636
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	daucus_carota	KZM85430	89.6296	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	81.4815	daucus_carota	KZM99938	89.6296	81.4815
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	86.6667	rosa_chinensis	PRQ52275	91.1111	86.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	80	juglans_regia	cds.Jr01_13260_p1	91.8519	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	80	juglans_regia	cds.Jr10_09870_p1	93.3333	80
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	nymphaea_colorata	NC1G0108140.1:cds	33.7875	30.7902
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.8519	83.7037	nymphaea_colorata	NC1G0105480.1:cds	91.8519	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	93.3333	82.2222	nymphaea_colorata	NC6G0040280.1:cds	93.3333	82.2222
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	82.963	vigna_angularis	KOM27857	91.1111	82.963
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.1481	78.5185	vigna_angularis	KOM25003	64.3243	57.2973
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	setaria_italica	KQL10720	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	89.6296	80	setaria_italica	KQL14891	88.3212	78.8321
AT3G22230	arabidopsis_thaliana	AT3G22230.1	80	67.4074	physcomitrium_patens	Pp3c8_24410V3.1	80	67.4074
AT3G22230	arabidopsis_thaliana	AT3G22230.1	80	66.6667	physcomitrium_patens	Pp3c24_20290V3.1	80	66.6667
AT3G22230	arabidopsis_thaliana	AT3G22230.1	80	69.6296	physcomitrium_patens	Pp3c15_4610V3.1	80	69.6296
AT3G22230	arabidopsis_thaliana	AT3G22230.1	80	67.4074	physcomitrium_patens	Pp3c23_21640V3.1	80	67.4074
AT3G22230	arabidopsis_thaliana	AT3G22230.1	92.5926	83.7037	vitis_vinifera	Vitvi01g00142_P001	92.5926	83.7037
AT3G22230	arabidopsis_thaliana	AT3G22230.1	91.1111	80.7407	cynara_cardunculus	KVI09656	91.1111	80.7407
AT3G22230	arabidopsis_thaliana	AT3G22230.1	88.8889	76.2963	cynara_cardunculus	KVI05053	71.0059	60.9467
AT3G22230	arabidopsis_thaliana	AT3G22230.1	90.3704	80.7407	cynara_cardunculus	KVI07449	90.3704	80.7407

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003729	enables mRNA binding	1	IDA	Arabidopsis_thaliana(3702)	Function
GO:0005737	located_in cytoplasm	1	ISM	Arabidopsis_thaliana(3702)	Component
GO:0005794	NOT located_in Golgi apparatus	1	RCA	Arabidopsis_thaliana(3702)	Component
GO:0005829	located_in cytosol	1	HDA	Arabidopsis_thaliana(3702)	Component
GO:0006412	involved_in translation	1	IEA	Arabidopsis_thaliana(3702)	Process
GO:0022625	part_of cytosolic large ribosomal subunit	1	HDA	Arabidopsis_thaliana(3702)	Component
GO:0022626	located_in cytosolic ribosome	1	HDA	Arabidopsis_thaliana(3702)	Component

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression