| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AT3G21740 | Gene ID |
821728 |
Accession |
- |
| Symbol |
APO4 |
Alias |
- |
Full Name |
APO RNA-binding protein (DUF794) |
| Status |
Confidence |
Length |
1913 bases |
Strand |
Minus strand |
| Position |
3 : 7662186 - 7664098 |
RNA binding domain |
APO_RNA-bind |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AT3G21740 |
APO_RNA-bind |
PF05634 |
3e-57 |
1 |
| AT3G21740 |
APO_RNA-bind |
PF05634 |
3e-57 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| APO4-201 |
AT3G21740 |
1589 |
337aa |
AT3G21740 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT3G21740 | arabidopsis_thaliana | AT1G64810.2 | 36.087 | 24.7826 | arabidopsis_thaliana | AT3G21740.1 | 49.2582 | 33.8279 |
| AT3G21740 | arabidopsis_thaliana | AT5G61930.1 | 41.0448 | 24.1294 | arabidopsis_thaliana | AT3G21740.1 | 48.9614 | 28.7834 |
| AT3G21740 | arabidopsis_thaliana | AT5G57930.2 | 38.6005 | 26.8623 | arabidopsis_thaliana | AT3G21740.1 | 50.7418 | 35.3116 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 50.4451 | 34.1246 | marchantia_polymorpha | PTQ45938 | 35.9408 | 24.3129 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 62.0178 | 46.8843 | papaver_somniferum | RZC73424 | 46.2389 | 34.9558 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 62.908 | 48.6647 | papaver_somniferum | RZC46279 | 66.4577 | 51.4107 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 63.7982 | 49.8516 | papaver_somniferum | RZC65591 | 67.6101 | 52.8302 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 66.7656 | 50.1484 | cannabis_sativa_female | cds.evm.model.03.1228 | 67.1642 | 50.4478 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 63.5015 | 49.2582 | ficus_carica | FCD_00012089-RA:cds | 67.2956 | 52.2013 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 63.5015 | 49.2582 | ficus_carica | FCD_00033816-RA:cds | 67.2956 | 52.2013 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 70.6231 | 57.27 | theobroma_cacao | EOY03986 | 76.2821 | 61.859 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 68.8427 | 51.9288 | beta_vulgaris | KMT18741 | 68.2353 | 51.4706 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 68.546 | 52.819 | solanum_lycopersicum | Solyc04g080060.3.1 | 67.3469 | 51.895 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 33.5312 | 24.3323 | solanum_lycopersicum | Solyc04g080110.3.1 | 64.5714 | 46.8571 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.8754 | 51.632 | lactuca_sativa | cds-PLY70604.1 | 68.3077 | 53.5385 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 66.4688 | 51.9288 | vigna_radiata | Vradi05g22690.1 | 66.8657 | 52.2388 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 63.2047 | 48.0712 | amborella_trichopoda | ERM99402 | 57.1046 | 43.4316 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.2819 | 52.5223 | vigna_unguiculata | Vigun05g225700.1.v1.2 | 65.6716 | 52.8358 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 59.3472 | 40.9496 | prunus_avium | Pav_sc0000582.1_g640.1.mk:mrna | 53.1915 | 36.7021 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.6558 | 49.8516 | prunus_avium | Pav_sc0000405.1_g020.1.mk:mrna | 69.0909 | 50.9091 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 64.6884 | 51.9288 | phaseolus_vulgaris | ESW21955 | 65.0746 | 52.2388 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 48.9614 | 37.9822 | asparagus_officinalis | ONK63392 | 61.7978 | 47.9401 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.359 | 51.632 | pisum_sativum | Psat2g121120.1.cds | 67.359 | 51.632 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 45.6973 | 29.0801 | quercus_suber | cds-POE89197.1 | 38.1188 | 24.2574 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 46.5875 | 31.7507 | ananas_comosus | Aco009185.1.mrna1 | 38.1995 | 26.0341 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 97.0326 | 94.0653 | arabidopsis_lyrata | fgenesh1_pm.C_scaffold_3001930 | 97.0326 | 94.0653 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.8754 | 52.5223 | lupinus_angustifolius | OIW04023 | 68.9441 | 54.9689 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 64.6884 | 51.9288 | lupinus_angustifolius | OIW15716 | 67.9128 | 54.5171 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.2819 | 52.5223 | lupinus_angustifolius | OIW04057 | 68.5358 | 55.1402 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 91.6914 | 81.8991 | eutrema_salsugineum | ESQ48065 | 91.4201 | 81.6568 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 86.3502 | 84.8665 | arabidopsis_halleri | g11281.t1 | 97.9798 | 96.2963 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 66.7656 | 53.4125 | cajanus_cajan | C.cajan_36565.t | 68.3891 | 54.7112 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 68.546 | 52.819 | solanum_tuberosum | PGSC0003DMT400013227 | 67.3469 | 51.895 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 59.3472 | 45.4006 | ipomoea_triloba | itb01g34410.t1 | 58.8235 | 45 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.6558 | 54.3027 | ipomoea_triloba | itb12g16710.t2 | 69.3009 | 55.6231 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 92.8783 | 84.273 | arabis_alpina | KFK39492 | 91.7889 | 83.2845 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 11.276 | 4.45104 | ciona_savignyi | ENSCSAVP00000014406 | 33.6283 | 13.2743 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 91.3947 | 79.822 | brassica_juncea | cds.BjuA05g23320S | 85.0829 | 74.3094 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 92.8783 | 80.7122 | brassica_juncea | cds.BjuB01g15790S | 92.3304 | 80.236 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 24.3323 | 18.9911 | brassica_juncea | cds.BjuA03g22050S | 87.234 | 68.0851 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 61.1276 | 48.9614 | glycine_max | KRH26819 | 62.0482 | 49.6988 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.5786 | 51.632 | glycine_max | KRH22537 | 69.4969 | 54.717 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 70.0297 | 55.1929 | corymbia_citriodora | cds-KAF8043409.1 | 71.9512 | 56.7073 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 64.9852 | 52.2255 | fraxinus_excelsior | FRAEX38873_v2_000311450.2.cds | 66.9725 | 53.8226 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 40.3561 | 26.7062 | selaginella_moellendorffii | EFJ30965 | 39.3064 | 26.0116 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 41.2463 | 27.2997 | selaginella_moellendorffii | EFJ34755 | 38.292 | 25.3444 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 11.276 | 5.34125 | homo_sapiens | ENSP00000419449 | 33.6283 | 15.9292 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 69.1395 | 56.3798 | gossypium_raimondii | KJB43012 | 70.3927 | 57.4018 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.8754 | 52.2255 | helianthus_annuus | mRNA:HanXRQr2_Chr11g0504071 | 68.5185 | 54.321 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 51.632 | medicago_truncatula | AES67272 | 65.6977 | 50.5814 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 47.4777 | manihot_esculenta | OAY35700 | 69.5385 | 49.2308 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 52.5223 | kalanchoe_fedtschenkoi | Kaladp0472s0018.1.v1.1 | 64.3875 | 50.4273 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 51.3353 | trifolium_pratense | Tp57577_TGAC_v2_mRNA4348 | 67.8679 | 51.952 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 91.3947 | 79.822 | brassica_rapa_ro18 | A05p036330.1_BraROA.1 | 93.0514 | 81.2689 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 68.546 | 55.4896 | eucalyptus_grandis | KCW89605 | 70.4268 | 57.0122 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 69.4362 | 51.3353 | prunus_persica | ONI18505 | 70.9091 | 52.4242 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 47.7745 | prunus_persica | ONH89639 | 69.1132 | 49.2355 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 64.3917 | 49.2582 | chenopodium_quinoa | AUR62026128-RA:cds | 67.1827 | 51.3932 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 90.5044 | 79.2285 | brassica_oleracea | Bo5g098750.1 | 92.145 | 80.6646 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.359 | 50.1484 | prunus_dulcis | VVA32438 | 61.3514 | 45.6757 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 66.7656 | 46.5875 | prunus_dulcis | VVA24752 | 68.8073 | 48.0122 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.5786 | 52.2255 | olea_europaea | OE9A003230C1 | 67.5841 | 53.8226 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 69.7329 | 56.0831 | pistacia_vera | cds-EVM0027681.1 | 72.5309 | 58.3333 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 69.7329 | 56.0831 | pistacia_vera | cds-EVM0001528.1 | 72.5309 | 58.3333 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 11.5727 | 5.34125 | drosophila_melanogaster | FBpp0072908 | 35.4545 | 16.3636 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 40.0593 | 28.4866 | brassica_napus | CDY24260 | 53.7849 | 38.247 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 91.3947 | 79.822 | brassica_napus | CDY38637 | 93.0514 | 81.2689 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 91.0979 | 79.2285 | brassica_napus | CDY33138 | 91.369 | 79.4643 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 43.9169 | 35.0148 | brassica_napus | CDX92921 | 73.2673 | 58.4158 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 95.2522 | 89.911 | camelina_sativa | Csa19g030880.1 | 94.9704 | 89.645 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 95.549 | 90.8012 | camelina_sativa | Csa01g024890.1 | 95.2663 | 90.5325 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 95.549 | 89.911 | camelina_sativa | Csa15g032240.1 | 95.2663 | 89.645 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 56.6766 | 42.1365 | malus_domestica_golden | mRNA:MD12G0146700 | 68.705 | 51.0791 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 43.9169 | 31.7507 | malus_domestica_golden | mRNA:MD17G0082200 | 56.0606 | 40.5303 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 67.0623 | 49.5549 | malus_domestica_golden | mRNA:MD01G0015600 | 63.3053 | 46.7787 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 40.9496 | 31.1573 | malus_domestica_golden | CDS:MD09G0092100.1 | 66.3462 | 50.4808 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 70.3264 | 52.819 | malus_domestica_golden | mRNA:MD12G0146400 | 71.1712 | 53.4535 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.8754 | 51.0386 | daucus_carota | KZN00004 | 70.7006 | 54.7771 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 65.8754 | 50.7418 | daucus_carota | KZM89575 | 70.7006 | 54.4586 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 70.0297 | 54.3027 | rosa_chinensis | PRQ52847 | 67.8161 | 52.5862 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 70.3264 | 54.3027 | rosa_chinensis | PRQ34949 | 68.1034 | 52.5862 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 62.6113 | 45.6973 | nymphaea_colorata | NC14G0174560.1:cds | 70.0997 | 51.1628 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 52.5223 | 34.7181 | physcomitrium_patens | Pp3c1_33440V3.1 | 34.638 | 22.8963 |
| AT3G21740 | arabidopsis_thaliana | AT3G21740.1 | 62.6113 | 49.8516 | cynara_cardunculus | KVI00400 | 69.637 | 55.4455 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0005739 | located_in mitochondrion | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0043412 | acts_upstream_of_or_within macromolecule modification | 1 | IEA | Arabidopsis_thaliana(3702) | Process |
