Description

Ensembl ID AT3G01800 Gene ID 821076 Accession -
Symbol AT3G01800 Alias - Full Name Ribosome recycling factor
Status Confidence Length 2080 bases Strand Plus strand
Position 3 : 285871 - 287950 RNA binding domain RRF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT3G01800 RRF PF01765 3e-54 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT3G01800-201 AT3G01800 1360 267aa AT3G01800

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT3G01800arabidopsis_thalianaAT3G63190.136.727322.5455arabidopsis_thalianaAT3G01800.137.827723.221

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT3G01800arabidopsis_thalianaAT3G01800.144.194824.7191chlamydomonas_reinhardtiiPNW7632642.44623.741
AT3G01800arabidopsis_thalianaAT3G01800.137.453226.5918marchantia_polymorphaPTQ4253342.194129.9578
AT3G01800arabidopsis_thalianaAT3G01800.167.041246.4419papaver_somniferumRZC7465360.47341.8919
AT3G01800arabidopsis_thalianaAT3G01800.167.415746.8165papaver_somniferumRZC6998765.693445.6204
AT3G01800arabidopsis_thalianaAT3G01800.172.659257.3034cannabis_sativa_femalecds.evm.model.10.187973.764358.1749
AT3G01800arabidopsis_thalianaAT3G01800.170.41255.4307ficus_caricaFCD_00001906-RA:cds66.197252.1127
AT3G01800arabidopsis_thalianaAT3G01800.177.153665.1685theobroma_cacaoEOY2031378.030365.9091
AT3G01800arabidopsis_thalianaAT3G01800.170.786561.4232beta_vulgarisKMT1156472.97363.3205
AT3G01800arabidopsis_thalianaAT3G01800.172.659257.3034cucumis_meloMELO3C008210.2.173.764358.1749
AT3G01800arabidopsis_thalianaAT3G01800.173.033758.0524cucumis_sativusKGN4571974.144558.9354
AT3G01800arabidopsis_thalianaAT3G01800.173.033759.5506populus_trichocarpaPotri.001G333700.3.v4.171.428658.2418
AT3G01800arabidopsis_thalianaAT3G01800.170.037556.5543solanum_lycopersicumSolyc11g007740.2.167.50954.5126
AT3G01800arabidopsis_thalianaAT3G01800.129.962511.236caenorhabditis_elegansT20F5.3.133.613412.605
AT3G01800arabidopsis_thalianaAT3G01800.155.430745.6929lactuca_sativacds-PLY97764.177.083363.5417
AT3G01800arabidopsis_thalianaAT3G01800.144.194829.588ostreococcus_lucimarinusABO9723549.579833.1933
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.5543eragrostis_curvulaTVU1545473.461558.0769
AT3G01800arabidopsis_thalianaAT3G01800.155.430744.9438eragrostis_curvulaTVU1543686.549770.1754
AT3G01800arabidopsis_thalianaAT3G01800.173.033759.176citrullus_lanatusCla97C11G213880.174.144560.076
AT3G01800arabidopsis_thalianaAT3G01800.173.033756.5543vigna_radiataVradi0206s00070.165.878451.0135
AT3G01800arabidopsis_thalianaAT3G01800.161.048749.4382amborella_trichopodaERN1885280.295665.0246
AT3G01800arabidopsis_thalianaAT3G01800.170.41256.1798vigna_unguiculataVigun11g012400.1.v1.271.482957.0342
AT3G01800arabidopsis_thalianaAT3G01800.170.41255.0562prunus_aviumPav_sc0002681.1_g060.1.mk:mrna72.868256.9767
AT3G01800arabidopsis_thalianaAT3G01800.171.910157.3034phaseolus_vulgarisESW0571673.563258.6207
AT3G01800arabidopsis_thalianaAT3G01800.167.041252.809asparagus_officinalisONK7774663.701150.1779
AT3G01800arabidopsis_thalianaAT3G01800.150.561837.8277pisum_sativumPsat5g082120.1.cds40.662730.4217
AT3G01800arabidopsis_thalianaAT3G01800.150.936335.9551pisum_sativumPsat1g072160.1.cds5035.2941
AT3G01800arabidopsis_thalianaAT3G01800.173.033758.427pisum_sativumPsat6g103880.1.cds74.427559.542
AT3G01800arabidopsis_thalianaAT3G01800.162.172348.3146brachypodium_distachyonKQJ8329469.747954.2017
AT3G01800arabidopsis_thalianaAT3G01800.146.816532.2097brachypodium_distachyonPNT6135248.828133.5938
AT3G01800arabidopsis_thalianaAT3G01800.170.786559.5506quercus_subercds-POF20154.170.786559.5506
AT3G01800arabidopsis_thalianaAT3G01800.169.662954.3071ananas_comosusAco008085.1.mrna162.837848.9865
AT3G01800arabidopsis_thalianaAT3G01800.180.149877.5281arabidopsis_lyratafgenesh1_pm.C_scaffold_300002989.91686.9748
AT3G01800arabidopsis_thalianaAT3G01800.170.41259.5506quercus_lobataQL02p072006:mrna69.372758.6716
AT3G01800arabidopsis_thalianaAT3G01800.170.037554.3071lupinus_angustifoliusOIV8939170.833354.9242
AT3G01800arabidopsis_thalianaAT3G01800.177.902673.0337eutrema_salsugineumESQ5000280.620275.5814
AT3G01800arabidopsis_thalianaAT3G01800.195.880194.7566arabidopsis_hallerig02660.t195.880194.7566
AT3G01800arabidopsis_thalianaAT3G01800.173.408256.9288cajanus_cajanC.cajan_39758.t75.095858.2375
AT3G01800arabidopsis_thalianaAT3G01800.170.786557.6779solanum_tuberosumPGSC0003DMT40007026967.555
AT3G01800arabidopsis_thalianaAT3G01800.172.284657.6779setaria_viridisTKW0512774.517459.4595
AT3G01800arabidopsis_thalianaAT3G01800.167.415753.5581oryza_nivaraONIVA04G15040.17257.2
AT3G01800arabidopsis_thalianaAT3G01800.172.284658.0524ipomoea_trilobaitb08g11340.t167.957754.5775
AT3G01800arabidopsis_thalianaAT3G01800.167.415753.5581oryza_glumipatulaOGLUM04G16970.17257.2
AT3G01800arabidopsis_thalianaAT3G01800.170.786554.6816zea_maysZm00001eb425520_P00172.97356.3707
AT3G01800arabidopsis_thalianaAT3G01800.171.16156.1798lolium_perennecds.KYUSt_chr2.4133372.796957.4713
AT3G01800arabidopsis_thalianaAT3G01800.146.441932.2097chara_brauniiGBG7019431.713621.9949
AT3G01800arabidopsis_thalianaAT3G01800.183.520678.6517arabis_alpinaKFK3764185.440680.4598
AT3G01800arabidopsis_thalianaAT3G01800.183.520676.03brassica_junceacds.BjuB07g29570S84.150976.6038
AT3G01800arabidopsis_thalianaAT3G01800.177.153671.9101brassica_junceacds.BjuA03g30750S76.014870.8487
AT3G01800arabidopsis_thalianaAT3G01800.171.910156.5543oryza_brachyanthaOB04G24210.173.846258.0769
AT3G01800arabidopsis_thalianaAT3G01800.172.659258.8015glycine_maxKRH2068374.329560.1533
AT3G01800arabidopsis_thalianaAT3G01800.138.202222.4719cyanidioschyzon_merolaeCMT419CT36.956521.7391
AT3G01800arabidopsis_thalianaAT3G01800.171.535662.1723corymbia_citriodoracds-KAF8013141.171.804562.406
AT3G01800arabidopsis_thalianaAT3G01800.171.910155.0562triticum_urartuTuG1812G0200003949.01.T0173.846256.5385
AT3G01800arabidopsis_thalianaAT3G01800.156.179845.6929oryza_longistaminataKN538822.1_FGP01187.719371.345
AT3G01800arabidopsis_thalianaAT3G01800.169.288456.5543fraxinus_excelsiorFRAEX38873_v2_000236180.1.cds63.573951.89
AT3G01800arabidopsis_thalianaAT3G01800.170.41255.4307avena_sativa_sangAVESA.00010b.r2.2AG0227760.1.CDS60.256447.4359
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.9288avena_sativa_sangAVESA.00010b.r2.2CG0306800.1.CDS73.180158.2375
AT3G01800arabidopsis_thalianaAT3G01800.170.786555.8052avena_sativa_sangAVESA.00010b.r2.2DG0375800.1.CDS72.413857.0881
AT3G01800arabidopsis_thalianaAT3G01800.168.913955.4307musa_acuminataMa10_p16580.168.401555.0186
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.9288oryza_glaberrimaORGLA04G0140400.173.461558.4615
AT3G01800arabidopsis_thalianaAT3G01800.171.535655.0562hordeum_vulgareHORVU.MOREX.r3.2HG0177450.173.461556.5385
AT3G01800arabidopsis_thalianaAT3G01800.171.910155.0562triticum_turgidumTRITD2Av1G209740.173.846256.5385
AT3G01800arabidopsis_thalianaAT3G01800.171.16154.6816triticum_turgidumTRITD2Bv1G173970.173.076956.1538
AT3G01800arabidopsis_thalianaAT3G01800.170.786555.8052panicum_halliiPUZ4776272.692357.3077
AT3G01800arabidopsis_thalianaAT3G01800.172.284657.3034echinochloa_crusgalliscaffold56.325.cds74.517459.0734
AT3G01800arabidopsis_thalianaAT3G01800.172.284656.5543echinochloa_crusgalliscaffold289.77.cds74.517458.3012
AT3G01800arabidopsis_thalianaAT3G01800.171.535661.0487actinidia_chinensisPSS3347172.075561.5094
AT3G01800arabidopsis_thalianaAT3G01800.169.288458.427actinidia_chinensisPSS3528771.984460.7004
AT3G01800arabidopsis_thalianaAT3G01800.174.531864.0449citrus_clementinaESR6035974.253763.806
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.9288oryza_indicaBGIOSGA014828-PA73.461558.4615
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.9288oryza_sativaOs04t0490400-0173.461558.4615
AT3G01800arabidopsis_thalianaAT3G01800.135.955117.603homo_sapiensENSP0000034386736.641217.9389
AT3G01800arabidopsis_thalianaAT3G01800.171.16155.0562triticum_aestivumTraesCS2D02G346400.173.076956.5385
AT3G01800arabidopsis_thalianaAT3G01800.171.16154.6816triticum_aestivumTraesCS2B02G366500.173.076956.1538
AT3G01800arabidopsis_thalianaAT3G01800.171.910155.0562triticum_aestivumTraesCS2A02G348100.173.846256.5385
AT3G01800arabidopsis_thalianaAT3G01800.167.415753.5581oryza_rufipogonORUFI04G18390.17257.2
AT3G01800arabidopsis_thalianaAT3G01800.171.910155.4307secale_cerealeSECCE2Rv1G0108830.173.846256.9231
AT3G01800arabidopsis_thalianaAT3G01800.175.655463.6704gossypium_raimondiiKJB1647875.373163.4328
AT3G01800arabidopsis_thalianaAT3G01800.168.913954.3071helianthus_annuusmRNA:HanXRQr2_Chr09g038756163.667850.173
AT3G01800arabidopsis_thalianaAT3G01800.171.535656.5543oryza_punctataOPUNC04G14740.173.461558.0769
AT3G01800arabidopsis_thalianaAT3G01800.171.910156.5543eragrostis_tefEt_7B_055312.CDS73.846258.0769
AT3G01800arabidopsis_thalianaAT3G01800.170.786555.8052eragrostis_tefEt_7A_050736.CDS72.692357.3077
AT3G01800arabidopsis_thalianaAT3G01800.171.910159.5506medicago_truncatulaAET0239873.003860.4563
AT3G01800arabidopsis_thalianaAT3G01800.171.16155.0562saccharum_spontaneumSspon.05G0024940-3D-mRNA-1:cds73.359156.7568
AT3G01800arabidopsis_thalianaAT3G01800.170.786554.3071saccharum_spontaneumSspon.05G0024940-1B-mRNA-1:cds72.97355.9846
AT3G01800arabidopsis_thalianaAT3G01800.171.16155.4307sorghum_bicolorEES1242173.643457.3643
AT3G01800arabidopsis_thalianaAT3G01800.171.16154.6816triticum_dicoccoidesTRIDC2BG053590.473.076956.1538
AT3G01800arabidopsis_thalianaAT3G01800.167.041252.809triticum_dicoccoidesTRIDC2AG050310.180.995563.8009
AT3G01800arabidopsis_thalianaAT3G01800.172.659259.5506coffea_canephoraCDP1667262.580651.2903
AT3G01800arabidopsis_thalianaAT3G01800.174.157360.6742manihot_esculentaOAY2557675.572561.8321
AT3G01800arabidopsis_thalianaAT3G01800.174.906463.6704manihot_esculentaOAY2960877.519465.8915
AT3G01800arabidopsis_thalianaAT3G01800.169.662957.3034kalanchoe_fedtschenkoiKaladp0095s0164.1.v1.172.941260
AT3G01800arabidopsis_thalianaAT3G01800.172.659259.5506trifolium_pratenseTp57577_TGAC_v2_mRNA2328635.859529.39
AT3G01800arabidopsis_thalianaAT3G01800.147.565538.2022trifolium_pratenseTp57577_TGAC_v2_mRNA1767652.263441.9753
AT3G01800arabidopsis_thalianaAT3G01800.177.902672.2846brassica_rapa_ro18A03p034090.1_BraROA.175.912470.438
AT3G01800arabidopsis_thalianaAT3G01800.173.033762.5468eucalyptus_grandisKCW5585172.761262.3134
AT3G01800arabidopsis_thalianaAT3G01800.171.16155.0562dioscorea_rotundataDRNTG_11191.171.428655.2632
AT3G01800arabidopsis_thalianaAT3G01800.171.910155.4307prunus_persicaONI1987774.418657.3643
AT3G01800arabidopsis_thalianaAT3G01800.143.820233.7079avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0001375.153.91741.4747
AT3G01800arabidopsis_thalianaAT3G01800.171.910156.9288avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0002170.160.188147.6489
AT3G01800arabidopsis_thalianaAT3G01800.168.164860.6742chenopodium_quinoaAUR62030702-RA:cds82.727373.6364
AT3G01800arabidopsis_thalianaAT3G01800.172.284656.5543digitaria_exilisDexi7A01G0010790.1:cds74.517458.3012
AT3G01800arabidopsis_thalianaAT3G01800.171.535655.0562digitaria_exilisDexi7B01G0011580.1:cds73.745256.7568
AT3G01800arabidopsis_thalianaAT3G01800.167.415753.5581oryza_barthiiOBART04G16940.17257.2
AT3G01800arabidopsis_thalianaAT3G01800.177.902672.6592brassica_oleraceaBo3g054930.177.611972.3881
AT3G01800arabidopsis_thalianaAT3G01800.170.41255.0562prunus_dulcisVVA2675372.868256.9767
AT3G01800arabidopsis_thalianaAT3G01800.172.659259.9251corylus_avellanaCav05g24890.t172.659259.9251
AT3G01800arabidopsis_thalianaAT3G01800.170.786555.0562leersia_perrieriLPERR04G13590.173.255856.9767
AT3G01800arabidopsis_thalianaAT3G01800.172.284659.176nicotiana_attenuataOIT0213668.439756.0284
AT3G01800arabidopsis_thalianaAT3G01800.170.037556.5543olea_europaeaOE9A026902C159.744448.2428
AT3G01800arabidopsis_thalianaAT3G01800.130.711615.3558saccharomyces_cerevisiaeYHR038W35.652217.8261
AT3G01800arabidopsis_thalianaAT3G01800.177.528168.1648pistacia_veracds-EVM0006791.177.238867.9104
AT3G01800arabidopsis_thalianaAT3G01800.136.329616.8539drosophila_melanogasterFBpp007617238.18917.7165
AT3G01800arabidopsis_thalianaAT3G01800.177.528172.2846brassica_napusCDX7431976.951771.7472
AT3G01800arabidopsis_thalianaAT3G01800.177.902672.6592brassica_napusCDX9192677.611972.3881
AT3G01800arabidopsis_thalianaAT3G01800.174.531863.6704corchorus_capsularisOMO8693377.431966.1479
AT3G01800arabidopsis_thalianaAT3G01800.167.041252.809oryza_meridionalisOMERI04G14290.171.656.4
AT3G01800arabidopsis_thalianaAT3G01800.182.771579.7753camelina_sativaCsa19g001140.173.666771
AT3G01800arabidopsis_thalianaAT3G01800.154.681641.9476malus_domestica_goldenmRNA:MD09G001370066.063350.6787
AT3G01800arabidopsis_thalianaAT3G01800.169.662955.4307malus_domestica_goldenmRNA:MD17G001310071.814757.1429
AT3G01800arabidopsis_thalianaAT3G01800.159.925149.8127daucus_carotaKZN1029674.766462.1495
AT3G01800arabidopsis_thalianaAT3G01800.168.913953.1835rosa_chinensisPRQ5419971.595355.2529
AT3G01800arabidopsis_thalianaAT3G01800.173.033761.4232juglans_regiacds.Jr01_06250_p162.903252.9032
AT3G01800arabidopsis_thalianaAT3G01800.171.16158.8015nymphaea_colorataNC3G0206320.1:cds71.698159.2453
AT3G01800arabidopsis_thalianaAT3G01800.172.284656.5543vigna_angularisKOM4919374.517458.3012
AT3G01800arabidopsis_thalianaAT3G01800.172.284657.6779setaria_italicaKQK9784774.517459.4595
AT3G01800arabidopsis_thalianaAT3G01800.155.430744.1948physcomitrium_patensPp3c24_18680V3.146.687737.224
AT3G01800arabidopsis_thalianaAT3G01800.167.790360.6742vitis_viniferaVitvi14g01582_P00170.15562.7907
AT3G01800arabidopsis_thalianaAT3G01800.168.539356.1798cynara_cardunculusKVH9277862.886651.5464

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005739located_in mitochondrion1HDAArabidopsis_thaliana(3702)Component
GO:0005829located_in cytosol1HDAArabidopsis_thaliana(3702)Component

Expression