Description

Ensembl ID AT2G39260 Gene ID 818511 Accession -
Symbol AT2G39260 Alias - Full Name regulator of nonsense transcripts UPF2
Status Confidence Length 7889 bases Strand Minus strand
Position 2 : 16391924 - 16399812 RNA binding domain Upf2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT2G39260 MIF4G PF02854 3.5e-85 1
AT2G39260 MIF4G PF02854 3.5e-85 2
AT2G39260 MIF4G PF02854 3.5e-85 3
AT2G39260 Upf2 PF04050 2.1e-32 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT2G39260-201 AT2G39260 4134 1181aa AT2G39260

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT2G39260

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT2G39260arabidopsis_thalianaAT2G39260.146.401426.4183chondrus_crispusCDF3884638.214821.7573
AT2G39260arabidopsis_thalianaAT2G39260.154.02235.5631chlamydomonas_reinhardtiiPNW7066148.963932.2333
AT2G39260arabidopsis_thalianaAT2G39260.176.88460.2032marchantia_polymorphaPTQ2738475.227858.9064
AT2G39260arabidopsis_thalianaAT2G39260.117.442814.6486papaver_somniferumRZC8356786.919872.9958
AT2G39260arabidopsis_thalianaAT2G39260.166.553856.9009cannabis_sativa_femalecds.evm.model.02.66682.56370.5882
AT2G39260arabidopsis_thalianaAT2G39260.184.504772.3963ficus_caricaFCD_00011635-RA:cds83.584671.608
AT2G39260arabidopsis_thalianaAT2G39260.184.16672.3963theobroma_cacaoEOY1850483.319471.6681
AT2G39260arabidopsis_thalianaAT2G39260.182.557269.7714beta_vulgarisKMT1862782.908270.068
AT2G39260arabidopsis_thalianaAT2G39260.183.573270.6181cucumis_meloMELO3C025497.2.182.663369.8492
AT2G39260arabidopsis_thalianaAT2G39260.183.996671.0415cucumis_sativusKGN5123783.012670.2092
AT2G39260arabidopsis_thalianaAT2G39260.185.012772.6503populus_trichocarpaPotri.008G045400.4.v4.184.440772.1615
AT2G39260arabidopsis_thalianaAT2G39260.183.742671.6342populus_trichocarpaPotri.010G216100.3.v4.183.179171.1522
AT2G39260arabidopsis_thalianaAT2G39260.182.980568.6706solanum_lycopersicumSolyc04g049770.3.180.791466.859
AT2G39260arabidopsis_thalianaAT2G39260.140.812921.3378caenorhabditis_elegansY73B6BL.18b.142.132922.028
AT2G39260arabidopsis_thalianaAT2G39260.116.003412.5318lactuca_sativacds-PLY84173.167.552.8571
AT2G39260arabidopsis_thalianaAT2G39260.19.314147.70533lactuca_sativacds-PLY68920.175.342562.3288
AT2G39260arabidopsis_thalianaAT2G39260.146.994129.5512ostreococcus_lucimarinusABO9550048.941830.776
AT2G39260arabidopsis_thalianaAT2G39260.180.186365.5377eragrostis_curvulaTVU2913079.713865.1515
AT2G39260arabidopsis_thalianaAT2G39260.174.597858.6791eragrostis_curvulaTVU1516875.557559.434
AT2G39260arabidopsis_thalianaAT2G39260.172.480956.6469eragrostis_curvulaTVU1514565.443451.1468
AT2G39260arabidopsis_thalianaAT2G39260.183.403971.0415citrullus_lanatusCla97C09G181780.178.050766.4818
AT2G39260arabidopsis_thalianaAT2G39260.172.565662.4047vigna_radiataVradi05g03670.186.304174.2195
AT2G39260arabidopsis_thalianaAT2G39260.181.371767.0618amborella_trichopodaERN1335579.618965.6172
AT2G39260arabidopsis_thalianaAT2G39260.184.758771.1262vigna_unguiculataVigun09g048500.1.v1.284.188470.6476
AT2G39260arabidopsis_thalianaAT2G39260.177.900166.9771prunus_aviumPav_sc0000789.1_g190.1.mk:mrna84.095172.3035
AT2G39260arabidopsis_thalianaAT2G39260.184.758770.7028phaseolus_vulgarisESW1051883.765769.8745
AT2G39260arabidopsis_thalianaAT2G39260.179.254966.1304asparagus_officinalisONK6602578.065165.1376
AT2G39260arabidopsis_thalianaAT2G39260.116.850113.7172pisum_sativumPsat0s6336g0040.1.cds72.627759.1241
AT2G39260arabidopsis_thalianaAT2G39260.116.934813.6325pisum_sativumPsat4g181480.1.cds71.428657.5
AT2G39260arabidopsis_thalianaAT2G39260.117.019513.3785pisum_sativumPsat4g181560.1.cds70.526355.4386
AT2G39260arabidopsis_thalianaAT2G39260.156.646946.6554pisum_sativumPsat1g019320.1.cds80.602466.3855
AT2G39260arabidopsis_thalianaAT2G39260.176.037362.066brachypodium_distachyonPNT6151075.335661.4933
AT2G39260arabidopsis_thalianaAT2G39260.180.355664.3522brachypodium_distachyonKQK0043979.414263.5983
AT2G39260arabidopsis_thalianaAT2G39260.181.710470.9568quercus_subercds-POF19349.179.358668.9145
AT2G39260arabidopsis_thalianaAT2G39260.181.456466.8078ananas_comosusAco011608.1.mrna180.166765.75
AT2G39260arabidopsis_thalianaAT2G39260.198.814697.2058arabidopsis_lyratascaffold_402668.198.814697.2058
AT2G39260arabidopsis_thalianaAT2G39260.185.266774.0051quercus_lobataQL08p057163:mrna57.378949.8006
AT2G39260arabidopsis_thalianaAT2G39260.182.557269.094capsicum_annuumPHT6898881.114867.8869
AT2G39260arabidopsis_thalianaAT2G39260.182.726569.2633lupinus_angustifoliusOIV9831281.757368.4519
AT2G39260arabidopsis_thalianaAT2G39260.182.557268.7553lupinus_angustifoliusOIV9728582.001768.2927
AT2G39260arabidopsis_thalianaAT2G39260.195.258391.2786eutrema_salsugineumESQ5260495.016991.0473
AT2G39260arabidopsis_thalianaAT2G39260.198.814697.1211arabidopsis_hallerig12481.t198.814697.1211
AT2G39260arabidopsis_thalianaAT2G39260.184.504771.0415cajanus_cajanC.cajan_34772.t83.444870.1505
AT2G39260arabidopsis_thalianaAT2G39260.173.412458.3404setaria_viridisTKW0551571.771557.0364
AT2G39260arabidopsis_thalianaAT2G39260.180.694365.8764setaria_viridisTKW4046079.815765.1591
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.2837oryza_nivaraONIVA02G27340.279.243764.7899
AT2G39260arabidopsis_thalianaAT2G39260.14.911093.81033oryza_nivaraONIVA04G17390.169.879554.2169
AT2G39260arabidopsis_thalianaAT2G39260.129.635921.1685oryza_nivaraONIVA04G17400.164.575646.1255
AT2G39260arabidopsis_thalianaAT2G39260.182.641869.6867ipomoea_trilobaitb11g07140.t281.74268.928
AT2G39260arabidopsis_thalianaAT2G39260.123.200717.1041oryza_glumipatulaOGLUM04G18960.167.654349.8765
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.2837oryza_glumipatulaOGLUM02G25470.179.243764.7899
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.0296zea_maysZm00001eb185340_P00179.044464.3755
AT2G39260arabidopsis_thalianaAT2G39260.180.27165.453zea_maysZm00001eb247890_P00279.39764.7404
AT2G39260arabidopsis_thalianaAT2G39260.180.52568.3319sesamum_indicumSIN_1010862.t81.49169.1517
AT2G39260arabidopsis_thalianaAT2G39260.176.88461.8967lolium_perennecds.KYUSt_chr2.4365375.47860.7648
AT2G39260arabidopsis_thalianaAT2G39260.171.888252.2439chara_brauniiGBG7492263.31146.0104
AT2G39260arabidopsis_thalianaAT2G39260.195.342991.5326arabis_alpinaKFK3681795.342991.5326
AT2G39260arabidopsis_thalianaAT2G39260.17.197294.74174ciona_savignyiENSCSAVP0000001321156.291437.0861
AT2G39260arabidopsis_thalianaAT2G39260.179.254975.1905brassica_junceacds.BjuA03g39360S91.406286.7188
AT2G39260arabidopsis_thalianaAT2G39260.193.056788.2303brassica_junceacds.BjuB08g41560S93.056788.2303
AT2G39260arabidopsis_thalianaAT2G39260.179.932364.945oryza_brachyanthaOB02G32310.179.327764.4538
AT2G39260arabidopsis_thalianaAT2G39260.184.758770.7875glycine_maxKRH3776584.259370.3704
AT2G39260arabidopsis_thalianaAT2G39260.184.758771.1262glycine_maxKRH1278084.330270.7666
AT2G39260arabidopsis_thalianaAT2G39260.184.4271.1262corymbia_citriodoracds-KAF8021915.183.361270.2341
AT2G39260arabidopsis_thalianaAT2G39260.176.545362.7434aegilops_tauschiiAET2Gv20846200.177.133163.2253
AT2G39260arabidopsis_thalianaAT2G39260.180.101664.4369aegilops_tauschiiAET6Gv20608600.279.629664.0572
AT2G39260arabidopsis_thalianaAT2G39260.176.37662.6588triticum_urartuTuG1812G0200004278.01.T0176.962563.1399
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.2837oryza_longistaminataKN538943.1_FGP00774.841361.1905
AT2G39260arabidopsis_thalianaAT2G39260.125.656217.4428oryza_longistaminataKN542248.1_FGP00162.217742.2998
AT2G39260arabidopsis_thalianaAT2G39260.169.856159.3565fraxinus_excelsiorFRAEX38873_v2_000022040.1.cds79.864567.8606
AT2G39260arabidopsis_thalianaAT2G39260.168.585956.6469fraxinus_excelsiorFRAEX38873_v2_000121360.1.cds79.567865.7171
AT2G39260arabidopsis_thalianaAT2G39260.176.37662.2354avena_sativa_sangAVESA.00010b.r2.2DG0372760.1.CDS76.505562.341
AT2G39260arabidopsis_thalianaAT2G39260.179.762964.2676avena_sativa_sangAVESA.00010b.r2.6CG1080030.2.CDS79.093263.728
AT2G39260arabidopsis_thalianaAT2G39260.179.593664.4369avena_sativa_sangAVESA.00010b.r2.6DG1165580.1.CDS78.991663.9496
AT2G39260arabidopsis_thalianaAT2G39260.176.460661.7273avena_sativa_sangAVESA.00010b.r2.2CG0310160.1.CDS77.113662.2545
AT2G39260arabidopsis_thalianaAT2G39260.176.545362.066avena_sativa_sangAVESA.00010b.r2.2AG0230770.1.CDS77.331162.7032
AT2G39260arabidopsis_thalianaAT2G39260.179.593664.4369avena_sativa_sangAVESA.00010b.r2.6AG1034660.1.CDS78.991663.9496
AT2G39260arabidopsis_thalianaAT2G39260.180.948365.6224musa_acuminataMa07_p21620.180.201365.0168
AT2G39260arabidopsis_thalianaAT2G39260.124.640117.1888oryza_glaberrimaORGLA04G0162000.164.380544.9115
AT2G39260arabidopsis_thalianaAT2G39260.174.089860.6266oryza_glaberrimaORGLA02G0218600.179.617865.1501
AT2G39260arabidopsis_thalianaAT2G39260.176.37662.6588hordeum_vulgareHORVU.MOREX.r3.2HG0182620.176.962563.1399
AT2G39260arabidopsis_thalianaAT2G39260.180.016964.3522hordeum_vulgareHORVU.MOREX.r3.6HG0596930.179.612564.027
AT2G39260arabidopsis_thalianaAT2G39260.175.105861.4733triticum_turgidumTRITD2Bv1G186610.275.425261.7347
AT2G39260arabidopsis_thalianaAT2G39260.180.016964.4369triticum_turgidumTRITD6Bv1G136060.379.545564.0572
AT2G39260arabidopsis_thalianaAT2G39260.176.460662.6588triticum_turgidumTRITD2Av1G224230.277.047863.1399
AT2G39260arabidopsis_thalianaAT2G39260.180.101664.4369triticum_turgidumTRITD6Av1G140650.679.629664.0572
AT2G39260arabidopsis_thalianaAT2G39260.180.355665.7917panicum_halliiPUZ7667478.951764.6423
AT2G39260arabidopsis_thalianaAT2G39260.180.355665.5377echinochloa_crusgalliscaffold162.71.cds70.820957.7612
AT2G39260arabidopsis_thalianaAT2G39260.171.210856.3082echinochloa_crusgalliscaffold49.672.cds74.35958.7975
AT2G39260arabidopsis_thalianaAT2G39260.180.609665.7917echinochloa_crusgalliscaffold108.387.cds79.73265.0754
AT2G39260arabidopsis_thalianaAT2G39260.169.009354.6147echinochloa_crusgalliscaffold309.15.cds36.270628.7049
AT2G39260arabidopsis_thalianaAT2G39260.174.343859.0178echinochloa_crusgalliscaffold200.89.cds59.972747.6093
AT2G39260arabidopsis_thalianaAT2G39260.180.77966.2151echinochloa_crusgalliscaffold17.149.cds79.966565.549
AT2G39260arabidopsis_thalianaAT2G39260.182.726570.3641actinidia_chinensisPSR9304181.825869.598
AT2G39260arabidopsis_thalianaAT2G39260.184.335371.9729citrus_clementinaESR5416679.299467.6752
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.2837oryza_indicaBGIOSGA005989-PA79.243764.7899
AT2G39260arabidopsis_thalianaAT2G39260.125.994918.6283oryza_indicaBGIOSGA014690-PA63.958345.8333
AT2G39260arabidopsis_thalianaAT2G39260.174.174458.8484selaginella_moellendorffiiEFJ1764276.707560.8581
AT2G39260arabidopsis_thalianaAT2G39260.175.359959.4412selaginella_moellendorffiiEFJ2910875.423759.4915
AT2G39260arabidopsis_thalianaAT2G39260.16.773925.41914oryza_sativaOs04t0523200-0171.428657.1429
AT2G39260arabidopsis_thalianaAT2G39260.112.19318.72142oryza_sativaOs02t0631601-0067.289748.1308
AT2G39260arabidopsis_thalianaAT2G39260.119.136314.4793oryza_sativaOs02t0631500-0064.204548.5795
AT2G39260arabidopsis_thalianaAT2G39260.19.229477.11262oryza_sativaOs04t0523350-0069.871853.8462
AT2G39260arabidopsis_thalianaAT2G39260.151.651133.7849homo_sapiensENSP0000035022147.95631.3679
AT2G39260arabidopsis_thalianaAT2G39260.180.101664.4369triticum_aestivumTraesCS6D02G213600.179.629664.0572
AT2G39260arabidopsis_thalianaAT2G39260.175.698661.9814triticum_aestivumTraesCS2B02G395500.176.279962.4573
AT2G39260arabidopsis_thalianaAT2G39260.176.545362.7434triticum_aestivumTraesCS2D02G375100.377.133163.2253
AT2G39260arabidopsis_thalianaAT2G39260.180.016964.3522triticum_aestivumTraesCS6A02G221700.379.545563.9731
AT2G39260arabidopsis_thalianaAT2G39260.180.016964.3522triticum_aestivumTraesCS6B02G259600.279.545563.9731
AT2G39260arabidopsis_thalianaAT2G39260.176.460662.6588triticum_aestivumTraesCS2A02G378500.177.047863.1399
AT2G39260arabidopsis_thalianaAT2G39260.134.03924.1321oryza_rufipogonORUFI04G20610.159.117641.9118
AT2G39260arabidopsis_thalianaAT2G39260.179.847665.199oryza_rufipogonORUFI02G26340.179.243764.7059
AT2G39260arabidopsis_thalianaAT2G39260.180.101664.5216secale_cerealeSECCE6Rv1G0399400.179.562764.0875
AT2G39260arabidopsis_thalianaAT2G39260.176.545362.6588secale_cerealeSECCE2Rv1G0112570.177.133163.1399
AT2G39260arabidopsis_thalianaAT2G39260.183.657972.0576gossypium_raimondiiKJB6768582.264870.8576
AT2G39260arabidopsis_thalianaAT2G39260.177.476765.453helianthus_annuusmRNA:HanXRQr2_Chr14g066371181.478268.8335
AT2G39260arabidopsis_thalianaAT2G39260.130.990725.3175helianthus_annuusmRNA:HanXRQr2_Chr03g011662180.616765.859
AT2G39260arabidopsis_thalianaAT2G39260.16.265885.41914helianthus_annuusmRNA:HanXRQr2_Chr09g036592189.156677.1084
AT2G39260arabidopsis_thalianaAT2G39260.124.640120.0677helianthus_annuusmRNA:HanXRQr2_Chr09g036591179.291564.5777
AT2G39260arabidopsis_thalianaAT2G39260.181.456468.3319helianthus_annuusmRNA:HanXRQr2_Chr07g031000181.663868.5059
AT2G39260arabidopsis_thalianaAT2G39260.179.932365.1143oryza_punctataOPUNC02G22780.179.327764.6218
AT2G39260arabidopsis_thalianaAT2G39260.125.910219.1363oryza_punctataOPUNC04G16780.160.83544.9304
AT2G39260arabidopsis_thalianaAT2G39260.180.186365.6224eragrostis_tefEt_1A_008534.CDS79.646865.1808
AT2G39260arabidopsis_thalianaAT2G39260.180.186365.199eragrostis_tefEt_1B_013352.CDS79.51364.6516
AT2G39260arabidopsis_thalianaAT2G39260.174.767159.6952eragrostis_tefEt_7A_052516.CDS74.389259.3934
AT2G39260arabidopsis_thalianaAT2G39260.137.087229.0432eragrostis_tefEt_7B_055143.CDS71.103955.6818
AT2G39260arabidopsis_thalianaAT2G39260.183.742670.2794medicago_truncatulaAES6576877.568665.098
AT2G39260arabidopsis_thalianaAT2G39260.163.928952.1592saccharum_spontaneumSspon.04G0007880-3C-mRNA-1:cds77.356663.1148
AT2G39260arabidopsis_thalianaAT2G39260.135.563129.4666saccharum_spontaneumSspon.04G0007880-2B-mRNA-1:cds76.22563.1579
AT2G39260arabidopsis_thalianaAT2G39260.178.746864.5216saccharum_spontaneumSspon.04G0007880-1A-mRNA-1:cds72.7759.6244
AT2G39260arabidopsis_thalianaAT2G39260.164.267651.3124saccharum_spontaneumSspon.04G0007880-1P-mRNA-1:cds73.191958.4378
AT2G39260arabidopsis_thalianaAT2G39260.112.53189.56816saccharum_spontaneumSspon.05G0006900-2C-mRNA-1:cds58.964145.0199
AT2G39260arabidopsis_thalianaAT2G39260.143.522434.7163saccharum_spontaneumSspon.05G0006900-1P-mRNA-1:cds67.454153.8058
AT2G39260arabidopsis_thalianaAT2G39260.180.77966.1304sorghum_bicolorEES0718779.966565.4652
AT2G39260arabidopsis_thalianaAT2G39260.159.695249.7883triticum_dicoccoidesTRIDC2AG054690.182.359868.6916
AT2G39260arabidopsis_thalianaAT2G39260.179.932364.3522triticum_dicoccoidesTRIDC6AG035590.279.461363.9731
AT2G39260arabidopsis_thalianaAT2G39260.177.476762.3201triticum_dicoccoidesTRIDC6BG042460.379.358263.8335
AT2G39260arabidopsis_thalianaAT2G39260.175.021261.4733triticum_dicoccoidesTRIDC2BG057450.574.142360.7531
AT2G39260arabidopsis_thalianaAT2G39260.182.218569.6867coffea_canephoraCDP0432481.528169.1016
AT2G39260arabidopsis_thalianaAT2G39260.185.182173.1583manihot_esculentaOAY4590583.693871.8802
AT2G39260arabidopsis_thalianaAT2G39260.161.134650.6351kalanchoe_fedtschenkoiKaladp0099s0084.1.v1.178.82165.2838
AT2G39260arabidopsis_thalianaAT2G39260.183.234668.84trifolium_pratenseTp57577_TGAC_v2_mRNA3305082.466468.2047
AT2G39260arabidopsis_thalianaAT2G39260.191.871387.0449brassica_rapa_ro18A03p022680.1_BraROA.192.340487.4894
AT2G39260arabidopsis_thalianaAT2G39260.183.319270.4488eucalyptus_grandisKCW6535082.068469.3912
AT2G39260arabidopsis_thalianaAT2G39260.180.77966.0457dioscorea_rotundataDRNTG_04770.179.565
AT2G39260arabidopsis_thalianaAT2G39260.184.250672.3116prunus_persicaONI2403384.179472.2504
AT2G39260arabidopsis_thalianaAT2G39260.176.545362.066avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0001616.177.331162.7032
AT2G39260arabidopsis_thalianaAT2G39260.180.101664.6909avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0001054.579.229563.9866
AT2G39260arabidopsis_thalianaAT2G39260.180.186364.6063avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0003370.379.51364.0638
AT2G39260arabidopsis_thalianaAT2G39260.176.460661.7273avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0002334.277.113662.2545
AT2G39260arabidopsis_thalianaAT2G39260.179.593664.4369avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0001364.278.991663.9496
AT2G39260arabidopsis_thalianaAT2G39260.176.291362.2354avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0001543.772.837559.4179
AT2G39260arabidopsis_thalianaAT2G39260.179.762967.9086chenopodium_quinoaAUR62023249-RA:cds84.712272.1223
AT2G39260arabidopsis_thalianaAT2G39260.149.788339.2887digitaria_exilisDexi7A01G0013000.1:cds68.055653.7037
AT2G39260arabidopsis_thalianaAT2G39260.176.799362.4047digitaria_exilisDexi1A01G0021090.1:cds74.958760.9091
AT2G39260arabidopsis_thalianaAT2G39260.156.900945.1312digitaria_exilisDexi7B01G0013800.1:cds69.278454.9485
AT2G39260arabidopsis_thalianaAT2G39260.176.799362.5741digitaria_exilisDexi1B01G0019690.1:cds74.958761.0744
AT2G39260arabidopsis_thalianaAT2G39260.125.740917.5275oryza_barthiiOBART04G19080.163.865543.4874
AT2G39260arabidopsis_thalianaAT2G39260.179.762965.2837oryza_barthiiOBART02G25030.179.159764.7899
AT2G39260arabidopsis_thalianaAT2G39260.192.633488.061brassica_oleraceaBo3g034220.193.265188.6616
AT2G39260arabidopsis_thalianaAT2G39260.184.4272.5656prunus_dulcisVVA1231881.387869.9592
AT2G39260arabidopsis_thalianaAT2G39260.143.099123.624galdieria_sulphurariaEME3000943.993124.1141
AT2G39260arabidopsis_thalianaAT2G39260.184.4272.989corylus_avellanaCav07g19950.t173.906663.8992
AT2G39260arabidopsis_thalianaAT2G39260.180.27165.3683leersia_perrieriLPERR02G20410.179.663964.8739
AT2G39260arabidopsis_thalianaAT2G39260.183.657969.7714nicotiana_attenuataOIT2839982.333368.6667
AT2G39260arabidopsis_thalianaAT2G39260.18.213386.68925olea_europaeaOE9A013893C179.508264.7541
AT2G39260arabidopsis_thalianaAT2G39260.121.168517.0195olea_europaeaOE9A114562C175.757660.9091
AT2G39260arabidopsis_thalianaAT2G39260.115.5812.4471olea_europaeaOE9A009021C177.310961.7647
AT2G39260arabidopsis_thalianaAT2G39260.116.596113.9712olea_europaeaOE9A047870C182.008469.0377
AT2G39260arabidopsis_thalianaAT2G39260.176.968763.6749olea_europaeaOE9A023938C178.837865.2212
AT2G39260arabidopsis_thalianaAT2G39260.138.611320.2371saccharomyces_cerevisiaeYHR077C41.873321.9467
AT2G39260arabidopsis_thalianaAT2G39260.182.895971.2955pistacia_veracds-EVM0006767.181.993370.5193
AT2G39260arabidopsis_thalianaAT2G39260.145.046627.4344drosophila_melanogasterFBpp007107242.868726.108
AT2G39260arabidopsis_thalianaAT2G39260.192.548787.8916brassica_napusCDY0766193.021388.3404
AT2G39260arabidopsis_thalianaAT2G39260.191.95687.1296brassica_napusCDY2497392.033987.2034
AT2G39260arabidopsis_thalianaAT2G39260.184.504772.6503corchorus_capsularisOMO7158783.584671.8593
AT2G39260arabidopsis_thalianaAT2G39260.112.27777.87468oryza_meridionalisOMERI04G15960.160.16638.5892
AT2G39260arabidopsis_thalianaAT2G39260.116.934812.8704oryza_meridionalisOMERI02G24500.163.492148.254
AT2G39260arabidopsis_thalianaAT2G39260.194.665591.3633camelina_sativaCsa04g053250.195.148991.8298
AT2G39260arabidopsis_thalianaAT2G39260.170.533468.1626camelina_sativaCsa06g043230.189.956886.933
AT2G39260arabidopsis_thalianaAT2G39260.194.750292.0406camelina_sativaCsa05g013990.195.23492.5106
AT2G39260arabidopsis_thalianaAT2G39260.123.031322.2693camelina_sativaCsa06g043220.190.365487.3754
AT2G39260arabidopsis_thalianaAT2G39260.183.319271.9729malus_domestica_goldenmRNA:MD07G015000083.03871.73
AT2G39260arabidopsis_thalianaAT2G39260.184.67473.0737malus_domestica_goldenmRNA:MD01G008960083.892672.3993
AT2G39260arabidopsis_thalianaAT2G39260.182.472569.2633daucus_carotaKZM8489381.642968.5666
AT2G39260arabidopsis_thalianaAT2G39260.183.827371.9729rosa_chinensisPRQ4476583.123471.3686
AT2G39260arabidopsis_thalianaAT2G39260.185.520773.243juglans_regiacds.Jr07_35410_p184.518872.3849
AT2G39260arabidopsis_thalianaAT2G39260.180.863765.9611nymphaea_colorataNC1G0182650.1:cds78.471664.0099
AT2G39260arabidopsis_thalianaAT2G39260.183.827370.3641vigna_angularisKOM2952780.226967.342
AT2G39260arabidopsis_thalianaAT2G39260.180.77966.0457setaria_italicaKQL3059579.899565.3266
AT2G39260arabidopsis_thalianaAT2G39260.173.412458.4251setaria_italicaKQK9814373.164658.2278
AT2G39260arabidopsis_thalianaAT2G39260.177.13860.8806physcomitrium_patensPp3c11_19990V3.172.705557.3823
AT2G39260arabidopsis_thalianaAT2G39260.184.504772.1423vitis_viniferaVitvi13g00528_P00180.809768.9879
AT2G39260arabidopsis_thalianaAT2G39260.182.557269.1787cynara_cardunculusKVH9177981.932868.6555

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000184involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1IMPArabidopsis_thaliana(3702)Process
GO:0003729enables mRNA binding1HDAArabidopsis_thaliana(3702)Function
GO:0005515enables protein binding1IPIArabidopsis_thaliana(3702)Function
GO:0005730located_in nucleolus1IDAArabidopsis_thaliana(3702)Component
GO:0005737located_in cytoplasm2IDA,ISMArabidopsis_thaliana(3702)Component
GO:0009611involved_in response to wounding1IMPArabidopsis_thaliana(3702)Process
GO:0009863involved_in salicylic acid mediated signaling pathway1IMPArabidopsis_thaliana(3702)Process
GO:0009867involved_in jasmonic acid mediated signaling pathway1IMPArabidopsis_thaliana(3702)Process
GO:0042742involved_in defense response to bacterium1IMPArabidopsis_thaliana(3702)Process
GO:0048571involved_in long-day photoperiodism1IMPArabidopsis_thaliana(3702)Process

Expression