Description

Ensembl ID AT2G04842 Gene ID 815029 Accession -
Symbol EMB2761 Alias - Full Name threonyl-tRNA synthetase, putative / threonine-tRNA ligase
Status Confidence Length 3537 bases Strand Minus strand
Position 2 : 1697902 - 1701438 RNA binding domain HGTP_anticodon , tRNA_SAD , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT2G04842 tRNA_SAD PF07973 5.4e-13 1
AT2G04842 tRNA_SAD PF07973 5.4e-13 2
AT2G04842 tRNA-synt_2b PF00587 3.9e-44 3
AT2G04842 tRNA-synt_2b PF00587 3.9e-44 4
AT2G04842 HGTP_anticodon PF03129 2.4e-19 5
AT2G04842 HGTP_anticodon PF03129 2.4e-19 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EMB2761-201 AT2G04842 2392 650aa AT2G04842

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT2G04842arabidopsis_thalianaAT1G17960.148.908334.0611arabidopsis_thalianaAT2G04842.134.461524
AT2G04842arabidopsis_thalianaAT5G26830.151.62232.7221arabidopsis_thalianaAT2G04842.156.307735.6923
AT2G04842arabidopsis_thalianaAT1G18130.149.090929.0909arabidopsis_thalianaAT2G04842.112.46157.38462
AT2G04842arabidopsis_thalianaAT5G52520.133.701716.9429arabidopsis_thalianaAT2G04842.128.153814.1538
AT2G04842arabidopsis_thalianaAT3G62120.134.339618.1132arabidopsis_thalianaAT2G04842.12814.7692

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT2G04842arabidopsis_thalianaAT2G04842.175.230860.4615chondrus_crispusCDF3923072.551958.3086
AT2G04842arabidopsis_thalianaAT2G04842.171.230856.9231chlamydomonas_reinhardtiiPNW7708774.317859.39
AT2G04842arabidopsis_thalianaAT2G04842.182.769270.1538marchantia_polymorphaPTQ3268676.638264.9573
AT2G04842arabidopsis_thalianaAT2G04842.187.230878.6154papaver_somniferumRZC4612482.532874.3814
AT2G04842arabidopsis_thalianaAT2G04842.187.846278cannabis_sativa_femalecds.evm.model.10.101085.096975.5589
AT2G04842arabidopsis_thalianaAT2G04842.184.153874.4615ficus_caricaFCD_00014243-RA:cds83.639174.0061
AT2G04842arabidopsis_thalianaAT2G04842.189.692380.1538theobroma_cacaoEOX9342087.275577.994
AT2G04842arabidopsis_thalianaAT2G04842.186.153876.3077beta_vulgarisKMT1346983.086173.5905
AT2G04842arabidopsis_thalianaAT2G04842.167.692358.3077cucumis_meloMELO3C024216.2.183.018971.5094
AT2G04842arabidopsis_thalianaAT2G04842.18675.6923cucumis_sativusKGN4343583.184573.2143
AT2G04842arabidopsis_thalianaAT2G04842.187.846279.2308populus_trichocarpaPotri.014G162200.1.v4.183.236275.0729
AT2G04842arabidopsis_thalianaAT2G04842.186.615476.6154solanum_lycopersicumSolyc07g048080.3.181.594272.1739
AT2G04842arabidopsis_thalianaAT2G04842.118.30779.38461caenorhabditis_elegansY46H3A.7a.140.33920.678
AT2G04842arabidopsis_thalianaAT2G04842.186.769276.4615lactuca_sativacds-PLY80652.184.431174.4012
AT2G04842arabidopsis_thalianaAT2G04842.17258.1538ostreococcus_lucimarinusABO9688682.978767.0213
AT2G04842arabidopsis_thalianaAT2G04842.187.846274.4615eragrostis_curvulaTVU2827284.218371.3864
AT2G04842arabidopsis_thalianaAT2G04842.187.538577.3846citrullus_lanatusCla97C02G029100.184.672674.8512
AT2G04842arabidopsis_thalianaAT2G04842.181.384672.6154vigna_radiataVradi05g16130.189.057279.4613
AT2G04842arabidopsis_thalianaAT2G04842.185.692374.4615amborella_trichopodaERN1829682.763771.9168
AT2G04842arabidopsis_thalianaAT2G04842.187.538576.9231vigna_unguiculataVigun05g301500.1.v1.287.269976.6871
AT2G04842arabidopsis_thalianaAT2G04842.188.153878.3077prunus_aviumPav_sc0001862.1_g100.1.mk:mrna84.638175.1846
AT2G04842arabidopsis_thalianaAT2G04842.187.384677.8462phaseolus_vulgarisESW1078986.453677.0167
AT2G04842arabidopsis_thalianaAT2G04842.188.153877.2308asparagus_officinalisONK6850885.522474.9254
AT2G04842arabidopsis_thalianaAT2G04842.181.692373.6923pisum_sativumPsat5g104480.3.cds94.652485.3832
AT2G04842arabidopsis_thalianaAT2G04842.185.846273.8462brachypodium_distachyonKQK0104984.162972.3982
AT2G04842arabidopsis_thalianaAT2G04842.177.230868quercus_subercds-POF18145.168.021759.8916
AT2G04842arabidopsis_thalianaAT2G04842.186.153875.2308ananas_comosusAco000794.1.mrna183.457572.8763
AT2G04842arabidopsis_thalianaAT2G04842.199.384698.4615arabidopsis_lyratafgenesh1_pm.C_scaffold_300230299.384698.4615
AT2G04842arabidopsis_thalianaAT2G04842.168.307760.4615quercus_lobataQL08p028982:mrna83.458673.8722
AT2G04842arabidopsis_thalianaAT2G04842.186.615477.8462quercus_lobataQL93p0116_0063:mrna83.407474.963
AT2G04842arabidopsis_thalianaAT2G04842.184.923174.4615capsicum_annuumPHT7630381.536271.4919
AT2G04842arabidopsis_thalianaAT2G04842.175.384667.5385lupinus_angustifoliusOIW0303863.968757.3107
AT2G04842arabidopsis_thalianaAT2G04842.197.692395.3846eutrema_salsugineumESQ3698197.542295.2381
AT2G04842arabidopsis_thalianaAT2G04842.186.153885.3846arabidopsis_hallerig16409.t199.821798.9305
AT2G04842arabidopsis_thalianaAT2G04842.185.846274.6154cajanus_cajanC.cajan_43754.t84.802473.7082
AT2G04842arabidopsis_thalianaAT2G04842.186.153875.8462solanum_tuberosumPGSC0003DMT40001571083.333373.3631
AT2G04842arabidopsis_thalianaAT2G04842.187.384675.2308setaria_viridisTKW3557085.542273.6446
AT2G04842arabidopsis_thalianaAT2G04842.187.846273.8462oryza_nivaraONIVA02G21550.182.514569.3642
AT2G04842arabidopsis_thalianaAT2G04842.186.461575.6923ipomoea_trilobaitb09g08340.t184.00673.5426
AT2G04842arabidopsis_thalianaAT2G04842.187.846274oryza_glumipatulaOGLUM02G19780.182.514569.5087
AT2G04842arabidopsis_thalianaAT2G04842.188.153875.3846zea_maysZm00001eb325920_P00186.165473.6842
AT2G04842arabidopsis_thalianaAT2G04842.18875.6923lolium_perennecds.KYUSt_chr6.1064487.062474.8858
AT2G04842arabidopsis_thalianaAT2G04842.154.923145.2308chara_brauniiGBG6915159.899349.3289
AT2G04842arabidopsis_thalianaAT2G04842.194.461591.6923arabis_alpinaKFK3177494.461591.6923
AT2G04842arabidopsis_thalianaAT2G04842.118.15389.38461ciona_savignyiENSCSAVP0000000740826.636613.7698
AT2G04842arabidopsis_thalianaAT2G04842.198.307796.1538brassica_junceacds.BjuB02g08810S93.970691.9118
AT2G04842arabidopsis_thalianaAT2G04842.198.153895.8462brassica_junceacds.BjuA03g20390S97.852895.5521
AT2G04842arabidopsis_thalianaAT2G04842.181.846270.4615oryza_brachyanthaOB02G27240.194.661981.4947
AT2G04842arabidopsis_thalianaAT2G04842.187.538575.6923glycine_maxKRG9612887.269975.4601
AT2G04842arabidopsis_thalianaAT2G04842.134.615430.3077glycine_maxKRH1787588.582777.5591
AT2G04842arabidopsis_thalianaAT2G04842.18.615397.84615glycine_maxKRH1787670.886164.557
AT2G04842arabidopsis_thalianaAT2G04842.172.923156cyanidioschyzon_merolaeCMO098CT70.014853.7666
AT2G04842arabidopsis_thalianaAT2G04842.185.846277.5385corymbia_citriodoracds-KAF8043011.184.417576.2481
AT2G04842arabidopsis_thalianaAT2G04842.187.230876aegilops_tauschiiAET6Gv20713100.382.293271.6981
AT2G04842arabidopsis_thalianaAT2G04842.187.230875.6923triticum_urartuTuG1812G0600003113.01.T0285.007573.7631
AT2G04842arabidopsis_thalianaAT2G04842.181.384670oryza_longistaminataKN540209.1_FGP00494.464381.25
AT2G04842arabidopsis_thalianaAT2G04842.186.923176.1538fraxinus_excelsiorFRAEX38873_v2_000233690.1.cds82.602372.3684
AT2G04842arabidopsis_thalianaAT2G04842.13833.5385avena_sativa_sangAVESA.00010b.r2.6AG1028160.1.CDS90.14679.562
AT2G04842arabidopsis_thalianaAT2G04842.169.076960.1538avena_sativa_sangAVESA.00010b.r2.6DG1171650.1.CDS83.925273.0841
AT2G04842arabidopsis_thalianaAT2G04842.188.153876.3077avena_sativa_sangAVESA.00010b.r2.6CG1087440.1.CDS86.686875.0378
AT2G04842arabidopsis_thalianaAT2G04842.187.692377.0769musa_acuminataMa04_p01470.184.319574.1124
AT2G04842arabidopsis_thalianaAT2G04842.187.846274oryza_glaberrimaORGLA02G0167000.184.218370.944
AT2G04842arabidopsis_thalianaAT2G04842.187.846276hordeum_vulgareHORVU.MOREX.r3.6HG0609890.185.607274.063
AT2G04842arabidopsis_thalianaAT2G04842.179.076968.7692triticum_turgidumTRITD6Av1G177580.374.384964.6889
AT2G04842arabidopsis_thalianaAT2G04842.187.076974.9231panicum_halliiPUZ7270985.24173.3434
AT2G04842arabidopsis_thalianaAT2G04842.187.538575.6923echinochloa_crusgalliscaffold2.629.cds85.563973.985
AT2G04842arabidopsis_thalianaAT2G04842.187.076974.7692echinochloa_crusgalliscaffold26.751.cds84.730572.7545
AT2G04842arabidopsis_thalianaAT2G04842.185.692374.3077echinochloa_crusgalliscaffold67.514.cds82.032471.134
AT2G04842arabidopsis_thalianaAT2G04842.187.230877.0769actinidia_chinensisPSS1433683.628373.8938
AT2G04842arabidopsis_thalianaAT2G04842.182.923175.5385citrus_clementinaESR6096273.533466.985
AT2G04842arabidopsis_thalianaAT2G04842.187.846273.8462oryza_indicaBGIOSGA006302-PA84.718171.2166
AT2G04842arabidopsis_thalianaAT2G04842.178.153863.2308selaginella_moellendorffiiEFJ2543263.899451.6981
AT2G04842arabidopsis_thalianaAT2G04842.156.615446.3077selaginella_moellendorffiiEFJ2345187.61971.6667
AT2G04842arabidopsis_thalianaAT2G04842.187.846273.8462oryza_sativaOs02t0538000-0184.718171.2166
AT2G04842arabidopsis_thalianaAT2G04842.1167.84615homo_sapiensENSP0000028496730.769215.0888
AT2G04842arabidopsis_thalianaAT2G04842.184.461573.3846triticum_aestivumTraesCS6B02G310700.184.853273.7249
AT2G04842arabidopsis_thalianaAT2G04842.187.076976triticum_aestivumTraesCS6D02G262800.184.857674.063
AT2G04842arabidopsis_thalianaAT2G04842.187.230875.3846triticum_aestivumTraesCS6A02G282300.185.007573.4633
AT2G04842arabidopsis_thalianaAT2G04842.187.846273.8462oryza_rufipogonORUFI02G20530.182.514569.3642
AT2G04842arabidopsis_thalianaAT2G04842.187.384676.3077secale_cerealeSECCE6Rv1G0404230.186.060675.1515
AT2G04842arabidopsis_thalianaAT2G04842.187.384676.3077secale_cerealeSECCE6Rv1G0404060.186.060675.1515
AT2G04842arabidopsis_thalianaAT2G04842.188.923179.3846gossypium_raimondiiKJB1027987.311277.9456
AT2G04842arabidopsis_thalianaAT2G04842.116.153814helianthus_annuusmRNA:HanXRQr2_Chr09g037951165.62556.875
AT2G04842arabidopsis_thalianaAT2G04842.187.846277.5385helianthus_annuusmRNA:HanXRQr2_Chr10g045171184.718174.7775
AT2G04842arabidopsis_thalianaAT2G04842.187.846274.4615oryza_punctataOPUNC02G17410.184.342771.4919
AT2G04842arabidopsis_thalianaAT2G04842.187.846275.6923eragrostis_tefEt_1B_014263.CDS84.84473.1055
AT2G04842arabidopsis_thalianaAT2G04842.187.538575.0769eragrostis_tefEt_1A_008172.CDS85.82273.6048
AT2G04842arabidopsis_thalianaAT2G04842.186.769276.4615medicago_truncatulaAES7182686.503176.227
AT2G04842arabidopsis_thalianaAT2G04842.187.538575.2308saccharum_spontaneumSspon.02G0034460-2C-mRNA-1:cds85.563973.5338
AT2G04842arabidopsis_thalianaAT2G04842.186.615474.6154saccharum_spontaneumSspon.02G0034460-3D-mRNA-1:cds85.30373.4848
AT2G04842arabidopsis_thalianaAT2G04842.18875.5385sorghum_bicolorKXG3658286.01573.8346
AT2G04842arabidopsis_thalianaAT2G04842.184.923173.8462triticum_dicoccoidesTRIDC6BG050560.184.662673.6196
AT2G04842arabidopsis_thalianaAT2G04842.184.769273.2308triticum_dicoccoidesTRIDC6AG043120.184.509273.0061
AT2G04842arabidopsis_thalianaAT2G04842.111.84629.84615coffea_canephoraCDP0982375.490262.7451
AT2G04842arabidopsis_thalianaAT2G04842.185.538575.5385coffea_canephoraCDP1825976.901867.9115
AT2G04842arabidopsis_thalianaAT2G04842.167.384661.5385manihot_esculentaOAY3499192.796684.7458
AT2G04842arabidopsis_thalianaAT2G04842.187.076976.4615kalanchoe_fedtschenkoiKaladp0045s0517.1.v1.184.603974.29
AT2G04842arabidopsis_thalianaAT2G04842.187.076977.2308trifolium_pratenseTp57577_TGAC_v2_mRNA1999486.676976.876
AT2G04842arabidopsis_thalianaAT2G04842.194.769292.3077brassica_rapa_ro18A03p047490.1_BraROA.179.279377.2201
AT2G04842arabidopsis_thalianaAT2G04842.179.692372.7692eucalyptus_grandisKCW8870993.333385.2252
AT2G04842arabidopsis_thalianaAT2G04842.138.307733.0769eucalyptus_grandisKCW8870771.142961.4286
AT2G04842arabidopsis_thalianaAT2G04842.179.230871.5385eucalyptus_grandisKCW8871189.565280.8696
AT2G04842arabidopsis_thalianaAT2G04842.180.615472dioscorea_rotundataDRNTG_31660.292.416282.5397
AT2G04842arabidopsis_thalianaAT2G04842.188.461578.3077prunus_persicaONI1822485.565575.744
AT2G04842arabidopsis_thalianaAT2G04842.188.461576.4615avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0002973.384.558873.0882
AT2G04842arabidopsis_thalianaAT2G04842.187.846275.8462avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0001013.384.218372.7139
AT2G04842arabidopsis_thalianaAT2G04842.188.153876avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0000701.184.513372.8614
AT2G04842arabidopsis_thalianaAT2G04842.186.615475.8462chenopodium_quinoaAUR62000956-RA:cds83.038372.7139
AT2G04842arabidopsis_thalianaAT2G04842.168.923158.9231digitaria_exilisDexi2B01G0030520.1:cds82.96370.9259
AT2G04842arabidopsis_thalianaAT2G04842.158.923150digitaria_exilisDexi2A01G0031620.1:cds80.801768.5654
AT2G04842arabidopsis_thalianaAT2G04842.187.846273.8462oryza_barthiiOBART02G19480.182.514569.3642
AT2G04842arabidopsis_thalianaAT2G04842.198.307796brassica_oleraceaBo3g085520.198.006195.7055
AT2G04842arabidopsis_thalianaAT2G04842.188.615478.7692prunus_dulcisVVA1745685.714376.1905
AT2G04842arabidopsis_thalianaAT2G04842.176.923159.6923galdieria_sulphurariaEME2632774.18457.5668
AT2G04842arabidopsis_thalianaAT2G04842.187.846278.6154corylus_avellanaCav05g01300.t179.415971.0709
AT2G04842arabidopsis_thalianaAT2G04842.188.307775.3846leersia_perrieriLPERR02G15660.186.05773.4633
AT2G04842arabidopsis_thalianaAT2G04842.125.538522.9231nicotiana_attenuataOIT2257895.402385.6322
AT2G04842arabidopsis_thalianaAT2G04842.186.923177.0769nicotiana_attenuataOIT0476783.456474.003
AT2G04842arabidopsis_thalianaAT2G04842.116.461514.1538olea_europaeaOE9A000615C182.945771.3178
AT2G04842arabidopsis_thalianaAT2G04842.163.692355.3846olea_europaeaOE9A114231C179.462669.0979
AT2G04842arabidopsis_thalianaAT2G04842.188.923179.5385pistacia_veracds-EVM0023368.186.917377.7444
AT2G04842arabidopsis_thalianaAT2G04842.115.84628.15385drosophila_melanogasterFBpp007542530.930915.9159
AT2G04842arabidopsis_thalianaAT2G04842.198.153896.1538brassica_napusCDX9306596.813494.8407
AT2G04842arabidopsis_thalianaAT2G04842.19895.3846brassica_napusCDY5004397.699495.092
AT2G04842arabidopsis_thalianaAT2G04842.188.615480.1538corchorus_capsularisOMO9436587.53879.1793
AT2G04842arabidopsis_thalianaAT2G04842.188.307774.3077oryza_meridionalisOMERI02G19370.184.536171.134
AT2G04842arabidopsis_thalianaAT2G04842.199.384698.1538camelina_sativaCsa01g036640.199.384698.1538
AT2G04842arabidopsis_thalianaAT2G04842.199.230897.8462camelina_sativaCsa15g056990.199.230897.8462
AT2G04842arabidopsis_thalianaAT2G04842.199.538598.3077camelina_sativaCsa19g040050.199.538598.3077
AT2G04842arabidopsis_thalianaAT2G04842.116.923114.6154malus_domestica_goldenmRNA:MD05G027980086.614274.8031
AT2G04842arabidopsis_thalianaAT2G04842.111.23089.69231malus_domestica_goldenmRNA:MD15G03416007363
AT2G04842arabidopsis_thalianaAT2G04842.128.461524.4615malus_domestica_goldenmRNA:MD05G014900070.075860.2273
AT2G04842arabidopsis_thalianaAT2G04842.11612.1538malus_domestica_goldenmRNA:MD05G014890061.904847.0238
AT2G04842arabidopsis_thalianaAT2G04842.173.230865.2308malus_domestica_goldenmRNA:MD17G009760086.388476.951
AT2G04842arabidopsis_thalianaAT2G04842.121.230817.2308malus_domestica_goldenmRNA:MD05G027990042.331334.3558
AT2G04842arabidopsis_thalianaAT2G04842.188.153878.4615malus_domestica_goldenmRNA:MD09G010480085.650276.2332
AT2G04842arabidopsis_thalianaAT2G04842.184.461575.5385daucus_carotaKZM9152384.722275.7716
AT2G04842arabidopsis_thalianaAT2G04842.187.692377.6923rosa_chinensisPRQ5256585.074675.3731
AT2G04842arabidopsis_thalianaAT2G04842.187.384679.3846juglans_regiacds.Jr01_33820_p184.902877.13
AT2G04842arabidopsis_thalianaAT2G04842.144.769239.5385nymphaea_colorataNC8G0125340.1:cds94.174883.1715
AT2G04842arabidopsis_thalianaAT2G04842.167.692359.6923vigna_angularisKOM4467186.78576.5286
AT2G04842arabidopsis_thalianaAT2G04842.187.230875.0769setaria_italicaKQL2646185.391673.494
AT2G04842arabidopsis_thalianaAT2G04842.182.769268physcomitrium_patensPp3c14_20630V3.177.633563.7807
AT2G04842arabidopsis_thalianaAT2G04842.183.692368.1538physcomitrium_patensPp3c2_11130V3.377.382663.0156
AT2G04842arabidopsis_thalianaAT2G04842.187.692379.3846vitis_viniferaVitvi12g00647_P00185.074677.0149
AT2G04842arabidopsis_thalianaAT2G04842.185.230875.0769cynara_cardunculusKVH9315784.451274.3902

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005739located_in mitochondrion1IDAArabidopsis_thaliana(3702)Component
GO:0009507located_in chloroplast3HDA,IDA,ISMArabidopsis_thaliana(3702)Component
GO:0009570located_in chloroplast stroma1HDAArabidopsis_thaliana(3702)Component
GO:0009793acts_upstream_of_or_within embryo development ending in seed dormancy1IMPArabidopsis_thaliana(3702)Process

Expression