| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AT1G62410 | Gene ID |
842539 |
Accession |
- |
| Symbol |
AT1G62410 |
Alias |
- |
Full Name |
MIF4G domain-containing protein |
| Status |
Confidence |
Length |
955 bases |
Strand |
Plus strand |
| Position |
1 : 23092915 - 23093869 |
RNA binding domain |
MIF4G |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AT1G62410 |
MIF4G |
PF02854 |
1.3e-29 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| AT1G62410-201 |
AT1G62410 |
672 |
223aa |
AT1G62410 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G62410 | arabidopsis_thaliana | AT3G60240.4 | 6.71685 | 4.4586 | arabidopsis_thaliana | AT1G62410.1 | 52.0179 | 34.5291 |
| AT1G62410 | arabidopsis_thaliana | AT5G57870.1 | 19.4872 | 14.1026 | arabidopsis_thaliana | AT1G62410.1 | 68.1614 | 49.3274 |
| AT1G62410 | arabidopsis_thaliana | AT2G24050.1 | 18.34 | 13.1191 | arabidopsis_thaliana | AT1G62410.1 | 61.435 | 43.9462 |
| AT1G62410 | arabidopsis_thaliana | AT4G30680.1 | 0.760456 | 0 | arabidopsis_thaliana | AT1G62410.1 | 0.896861 | 0 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 43.9462 | 23.3184 | chondrus_crispus | CDF38449 | 6.57718 | 3.48993 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 31.8386 | 17.4888 | chlamydomonas_reinhardtii | PNW75520 | 11.0248 | 6.0559 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 46.1883 | 27.8027 | chlamydomonas_reinhardtii | PNW69874 | 5.80936 | 3.4969 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 59.6413 | 43.0493 | marchantia_polymorpha | PTQ28793 | 15.3226 | 11.0599 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 39.9103 | 22.87 | caenorhabditis_elegans | M110.4e.1 | 7.67241 | 4.39655 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 37.2197 | 20.1794 | ostreococcus_lucimarinus | ABP00677 | 12.0464 | 6.5312 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 72.6457 | 62.3318 | arabidopsis_lyrata | scaffold_200318.1 | 59.7786 | 51.2915 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 66.3677 | 47.0852 | eutrema_salsugineum | ESQ29181 | 62.4473 | 44.3038 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 56.5022 | 38.565 | chara_braunii | GBG64049 | 12.6379 | 8.62588 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 43.9462 | 25.5605 | ciona_savignyi | ENSCSAVP00000018002 | 11.4486 | 6.65888 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 42.6009 | 23.7668 | cyanidioschyzon_merolae | CMS073CT | 13.5714 | 7.57143 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 46.6368 | 28.6996 | cyanidioschyzon_merolae | CMQ348CT | 6.15021 | 3.78474 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 57.8475 | 41.2556 | selaginella_moellendorffii | EFJ38407 | 16.5385 | 11.7949 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 57.8475 | 41.2556 | selaginella_moellendorffii | EFJ31744 | 21.9015 | 15.6197 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 48.8789 | 27.3543 | galdieria_sulphuraria | EME29588 | 7.04134 | 3.94057 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 42.6009 | 26.4574 | drosophila_melanogaster | FBpp0310717 | 4.58494 | 2.84749 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 43.9462 | 24.2152 | drosophila_melanogaster | FBpp0111817 | 5.10683 | 2.81397 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 58.296 | 39.0135 | physcomitrium_patens | PAC:32906660.CDS.1 | 15.0637 | 10.0811 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 58.296 | 38.565 | physcomitrium_patens | PAC:32960044.CDS.1 | 15.1692 | 10.035 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 58.296 | 39.0135 | physcomitrium_patens | PAC:32906790.CDS.1 | 15.0987 | 10.1045 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 58.296 | 38.565 | physcomitrium_patens | PAC:32961304.CDS.1 | 15.2225 | 10.0703 |
| AT1G62410 | arabidopsis_thaliana | AT1G62410.1 | 57.8475 | 39.0135 | physcomitrium_patens | PAC:32908271.CDS.1 | 15.0525 | 10.1517 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0003743 | enables translation initiation factor activity | 1 | ISS | Arabidopsis_thaliana(3702) | Function |
| GO:0005737 | located_in cytoplasm | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0008150 | involved_in biological_process | 1 | ND | Arabidopsis_thaliana(3702) | Process |
