Description

Ensembl ID AT1G26530 Gene ID 839193 Accession -
Symbol AT1G26530 Alias - Full Name PIN domain-like family protein
Status Confidence Length 2211 bases Strand Plus strand
Position 1 : 9165360 - 9167570 RNA binding domain Fcf1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT1G26530 Fcf1 PF04900 3.2e-24 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT1G26530-201 AT1G26530 1339 178aa AT1G26530

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT1G26530arabidopsis_thalianaAT2G46230.182.142978.5714arabidopsis_thalianaAT1G26530.190.449486.5169
AT1G26530arabidopsis_thalianaAT2G34570.120.64069.96441arabidopsis_thalianaAT1G26530.132.584315.7303

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT1G26530arabidopsis_thalianaAT1G26530.135.393329.2135chondrus_crispusCDF3997857.798247.7064
AT1G26530arabidopsis_thalianaAT1G26530.172.471958.427chlamydomonas_reinhardtiiPNW7217067.187554.1667
AT1G26530arabidopsis_thalianaAT1G26530.182.584369.6629marchantia_polymorphaPTQ4757473.869362.3116
AT1G26530arabidopsis_thalianaAT1G26530.153.370841.0112papaver_somniferumRZC7378835.849127.5472
AT1G26530arabidopsis_thalianaAT1G26530.185.955175.8427cannabis_sativa_femalecds.evm.model.07.126578.061268.8775
AT1G26530arabidopsis_thalianaAT1G26530.187.078775.8427theobroma_cacaoEOX9582378.282868.1818
AT1G26530arabidopsis_thalianaAT1G26530.182.584373.5955beta_vulgarisKMT2038074.242466.1616
AT1G26530arabidopsis_thalianaAT1G26530.176.404569.1011cucumis_meloMELO3C009766.2.173.91366.8478
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.4045cucumis_sativusKGN5945477.777868.6869
AT1G26530arabidopsis_thalianaAT1G26530.183.707973.5955populus_trichocarpaPotri.002G166200.1.v4.175.252566.1616
AT1G26530arabidopsis_thalianaAT1G26530.184.831574.7191populus_trichocarpaPotri.014G092600.3.v4.176.262667.1717
AT1G26530arabidopsis_thalianaAT1G26530.184.269774.7191solanum_lycopersicumSolyc03g121140.3.117.751515.7396
AT1G26530arabidopsis_thalianaAT1G26530.165.168546.6292caenorhabditis_elegansF30A10.9.159.183742.3469
AT1G26530arabidopsis_thalianaAT1G26530.171.910164.0449lactuca_sativacds-PLY77483.174.418666.2791
AT1G26530arabidopsis_thalianaAT1G26530.165.730357.3034lactuca_sativacds-PLY80511.191.406279.6875
AT1G26530arabidopsis_thalianaAT1G26530.168.539354.4944ostreococcus_lucimarinusABO965146148.5
AT1G26530arabidopsis_thalianaAT1G26530.182.022569.1011eragrostis_curvulaTVU1245756.589147.6744
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.4045citrullus_lanatusCla97C10G199020.177.777868.6869
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247vigna_radiataVradi0234s00150.169.856559.8086
AT1G26530arabidopsis_thalianaAT1G26530.127.528125.2809amborella_trichopodaERN0909759.036154.2169
AT1G26530arabidopsis_thalianaAT1G26530.183.146172.4719vigna_unguiculataVigun05g229800.1.v1.274.747565.1515
AT1G26530arabidopsis_thalianaAT1G26530.183.146171.9101phaseolus_vulgarisESW2199074.747564.6465
AT1G26530arabidopsis_thalianaAT1G26530.133.146123.5955asparagus_officinalisONK6648944.029931.3433
AT1G26530arabidopsis_thalianaAT1G26530.182.022572.4719pisum_sativumPsat3g005280.1.cds73.737465.1515
AT1G26530arabidopsis_thalianaAT1G26530.181.460771.3483brachypodium_distachyonKQK1951472.864363.8191
AT1G26530arabidopsis_thalianaAT1G26530.175.842764.6067quercus_subercds-POE98170.172.580661.828
AT1G26530arabidopsis_thalianaAT1G26530.178.089966.8539quercus_subercds-POE51273.175.956365.0273
AT1G26530arabidopsis_thalianaAT1G26530.184.269775.2809ananas_comosusAco000356.1.mrna175.757667.6768
AT1G26530arabidopsis_thalianaAT1G26530.192.696691.0112arabidopsis_lyrataAl_scaffold_0001_265184.183782.6531
AT1G26530arabidopsis_thalianaAT1G26530.181.460778.6517arabidopsis_lyrataAl_scaffold_0001_28405856
AT1G26530arabidopsis_thalianaAT1G26530.183.707971.9101quercus_lobataQL04p058903:mrna75.252564.6465
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247quercus_lobataQL06p021685:mrna60.330651.6529
AT1G26530arabidopsis_thalianaAT1G26530.174.157362.9213capsicum_annuumPHT8893663.461553.8462
AT1G26530arabidopsis_thalianaAT1G26530.182.584373.0337lupinus_angustifoliusOIW2168774.619365.9898
AT1G26530arabidopsis_thalianaAT1G26530.191.57386.5169eutrema_salsugineumESQ3926283.163378.5714
AT1G26530arabidopsis_thalianaAT1G26530.148.876447.7528arabidopsis_hallerig12905.t173.728872.0339
AT1G26530arabidopsis_thalianaAT1G26530.192.696691.0112arabidopsis_hallerig08088.t184.183782.6531
AT1G26530arabidopsis_thalianaAT1G26530.183.707973.0337cajanus_cajanC.cajan_32965.t62.869254.8523
AT1G26530arabidopsis_thalianaAT1G26530.182.584372.4719cajanus_cajanC.cajan_10831.t69.014160.5634
AT1G26530arabidopsis_thalianaAT1G26530.185.393376.4045solanum_tuberosumPGSC0003DMT40000670676.767768.6869
AT1G26530arabidopsis_thalianaAT1G26530.182.022571.3483setaria_viridisTKW2012773.366863.8191
AT1G26530arabidopsis_thalianaAT1G26530.179.213567.4157oryza_nivaraONIVA06G05240.167.464157.4163
AT1G26530arabidopsis_thalianaAT1G26530.184.831576.4045ipomoea_trilobaitb11g00190.t176.262668.6869
AT1G26530arabidopsis_thalianaAT1G26530.178.089966.2921oryza_glumipatulaOGLUM06G04000.165.56655.6604
AT1G26530arabidopsis_thalianaAT1G26530.180.337169.1011zea_maysZm00001eb376230_P00171.859361.809
AT1G26530arabidopsis_thalianaAT1G26530.170.224758.427zea_maysZm00001eb376200_P00169.444457.7778
AT1G26530arabidopsis_thalianaAT1G26530.180.898969.1011zea_maysZm00001eb376300_P00172.361861.809
AT1G26530arabidopsis_thalianaAT1G26530.169.662958.427zea_maysZm00001eb376270_P00168.888957.7778
AT1G26530arabidopsis_thalianaAT1G26530.181.460769.1011zea_maysZm00001eb376330_P00172.864361.809
AT1G26530arabidopsis_thalianaAT1G26530.175.280964.6067lolium_perennecds.KYUSt_chr7.3752941.614935.7143
AT1G26530arabidopsis_thalianaAT1G26530.175.280963.4831lolium_perennecds.KYUSt_chr1.3885055.601746.888
AT1G26530arabidopsis_thalianaAT1G26530.180.337167.4157chara_brauniiGBG7570571.859360.3015
AT1G26530arabidopsis_thalianaAT1G26530.188.76482.5843arabis_alpinaKFK3742180.612275
AT1G26530arabidopsis_thalianaAT1G26530.167.415755.618ciona_savignyiENSCSAVP0000000841563.157952.1053
AT1G26530arabidopsis_thalianaAT1G26530.188.76481.4607brassica_junceacds.BjuB06g58210S80.612273.9796
AT1G26530arabidopsis_thalianaAT1G26530.189.325880.8989brassica_junceacds.BjuA05g01470S81.122573.4694
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247oryza_brachyanthaOB06G13640.173.366862.8141
AT1G26530arabidopsis_thalianaAT1G26530.171.910160.1124glycine_maxKRG9709770.329758.7912
AT1G26530arabidopsis_thalianaAT1G26530.184.269774.1573glycine_maxKRH2674275.757666.6667
AT1G26530arabidopsis_thalianaAT1G26530.167.977555.618glycine_maxKRH6885063.350851.8325
AT1G26530arabidopsis_thalianaAT1G26530.184.269774.1573glycine_maxKRH2259075.757666.6667
AT1G26530arabidopsis_thalianaAT1G26530.167.415748.3146cyanidioschyzon_merolaeCML046CT61.224543.8776
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.9663corymbia_citriodoracds-KAF8026946.177.777869.1919
AT1G26530arabidopsis_thalianaAT1G26530.181.460769.6629aegilops_tauschiiAET7Gv20298800.160.924452.1008
AT1G26530arabidopsis_thalianaAT1G26530.182.022569.6629triticum_urartuTuG1812G0700001208.01.T0173.366862.3116
AT1G26530arabidopsis_thalianaAT1G26530.180.337168.5393oryza_longistaminataKN538819.1_FGP00169.756159.5122
AT1G26530arabidopsis_thalianaAT1G26530.185.955177.5281fraxinus_excelsiorFRAEX38873_v2_000000640.1.cds77.272769.697
AT1G26530arabidopsis_thalianaAT1G26530.180.898971.3483avena_sativa_sangAVESA.00010b.r2.5CG0862470.1.CDS72.361863.8191
AT1G26530arabidopsis_thalianaAT1G26530.181.460770.7865avena_sativa_sangAVESA.00010b.r2.1AG0038050.1.CDS72.864363.3166
AT1G26530arabidopsis_thalianaAT1G26530.180.898971.3483avena_sativa_sangAVESA.00010b.r2.7AG1204260.1.CDS72.361863.8191
AT1G26530arabidopsis_thalianaAT1G26530.154.494447.7528avena_sativa_sangAVESA.00010b.r2.7DG1339810.1.CDS62.98755.1948
AT1G26530arabidopsis_thalianaAT1G26530.181.460770.7865avena_sativa_sangAVESA.00010b.r2.1AG0006500.1.CDS72.864363.3166
AT1G26530arabidopsis_thalianaAT1G26530.181.460770.7865avena_sativa_sangAVESA.00010b.r2.1DG0157140.1.CDS72.864363.3166
AT1G26530arabidopsis_thalianaAT1G26530.184.269775.8427musa_acuminataMa04_p21960.175.757668.1818
AT1G26530arabidopsis_thalianaAT1G26530.183.707975.8427musa_acuminataMa05_p11390.147.452242.9936
AT1G26530arabidopsis_thalianaAT1G26530.180.337168.5393oryza_glaberrimaORGLA06G0036300.167.452857.5472
AT1G26530arabidopsis_thalianaAT1G26530.180.898968.5393hordeum_vulgareHORVU.MOREX.r3.7HG0654170.170.93660.0985
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.7865triticum_turgidumTRITD7Bv1G004470.471.921262.069
AT1G26530arabidopsis_thalianaAT1G26530.180.337167.9775triticum_turgidumTRITD7Av1G034720.167.452857.0755
AT1G26530arabidopsis_thalianaAT1G26530.183.146170.7865panicum_halliiPUZ6210574.371963.3166
AT1G26530arabidopsis_thalianaAT1G26530.180.337169.1011echinochloa_crusgalliscaffold367.4.cds71.859361.809
AT1G26530arabidopsis_thalianaAT1G26530.179.213567.4157echinochloa_crusgalliscaffold10.324.cds71.212160.6061
AT1G26530arabidopsis_thalianaAT1G26530.179.213567.4157echinochloa_crusgalliscaffold34.443.cds66.197256.338
AT1G26530arabidopsis_thalianaAT1G26530.184.831574.7191actinidia_chinensisPSS0398376.262667.1717
AT1G26530arabidopsis_thalianaAT1G26530.184.831574.7191actinidia_chinensisPSS2424276.262667.1717
AT1G26530arabidopsis_thalianaAT1G26530.186.516975.2809citrus_clementinaESR5815577.777867.6768
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247oryza_indicaBGIOSGA021867-PA73.366862.8141
AT1G26530arabidopsis_thalianaAT1G26530.180.898970.2247selaginella_moellendorffiiEFJ121467262.5
AT1G26530arabidopsis_thalianaAT1G26530.180.337169.6629selaginella_moellendorffiiEFJ2938665.898657.1429
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247oryza_sativaOs06t0158600-0173.366862.8141
AT1G26530arabidopsis_thalianaAT1G26530.173.033758.427homo_sapiensENSP0000034439365.656652.5253
AT1G26530arabidopsis_thalianaAT1G26530.182.022569.6629triticum_aestivumTraesCS7A02G117600.173.366862.3116
AT1G26530arabidopsis_thalianaAT1G26530.181.460769.6629triticum_aestivumTraesCS7D02G113200.172.864362.3116
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.7865triticum_aestivumTraesCS7B02G014700.273.366863.3166
AT1G26530arabidopsis_thalianaAT1G26530.179.213567.4157oryza_rufipogonORUFI06G03940.167.464157.4163
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247secale_cerealeSECCE4Rv1G0262380.173.366862.8141
AT1G26530arabidopsis_thalianaAT1G26530.187.640476.9663gossypium_raimondiiKJB4143478.787969.1919
AT1G26530arabidopsis_thalianaAT1G26530.187.078776.9663helianthus_annuusmRNA:HanXRQr2_Chr17g082050178.282869.1919
AT1G26530arabidopsis_thalianaAT1G26530.148.876439.8876oryza_punctataOPUNC06G03680.174.35960.6838
AT1G26530arabidopsis_thalianaAT1G26530.180.337169.1011eragrostis_tefEt_2B_020721.CDS67.136157.7465
AT1G26530arabidopsis_thalianaAT1G26530.180.337168.5393eragrostis_tefEt_2A_016556.CDS70.443460.0985
AT1G26530arabidopsis_thalianaAT1G26530.182.022571.3483medicago_truncatulaAES7673573.737464.1414
AT1G26530arabidopsis_thalianaAT1G26530.182.022572.4719medicago_truncatulaAES8273373.737465.1515
AT1G26530arabidopsis_thalianaAT1G26530.174.719164.0449saccharum_spontaneumSspon.08G0014460-2D-mRNA-1:cds79.640768.2635
AT1G26530arabidopsis_thalianaAT1G26530.143.258438.2022saccharum_spontaneumSspon.08G0014460-1A-mRNA-1:cds69.369461.2613
AT1G26530arabidopsis_thalianaAT1G26530.180.898969.1011sorghum_bicolorEER8923272.361861.809
AT1G26530arabidopsis_thalianaAT1G26530.180.337169.1011triticum_dicoccoidesTRIDC7BG002060.371.144361.194
AT1G26530arabidopsis_thalianaAT1G26530.180.337167.9775triticum_dicoccoidesTRIDC7AG013740.468.421157.8947
AT1G26530arabidopsis_thalianaAT1G26530.142.134837.0787coffea_canephoraCDP2169367.567659.4595
AT1G26530arabidopsis_thalianaAT1G26530.185.393375.8427coffea_canephoraCDP0873576.767768.1818
AT1G26530arabidopsis_thalianaAT1G26530.184.831574.1573manihot_esculentaOAY3725776.262666.6667
AT1G26530arabidopsis_thalianaAT1G26530.180.898969.6629kalanchoe_fedtschenkoiKaladp0081s0268.1.v1.171.287161.3861
AT1G26530arabidopsis_thalianaAT1G26530.181.460771.9101trifolium_pratenseTp57577_TGAC_v2_mRNA485873.232364.6465
AT1G26530arabidopsis_thalianaAT1G26530.189.325880.3371brassica_rapa_ro18A05p002720.1_BraROA.178.325170.4434
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.4045eucalyptus_grandisKCW7154177.777868.6869
AT1G26530arabidopsis_thalianaAT1G26530.184.831574.1573dioscorea_rotundataDRNTG_09784.176.262666.6667
AT1G26530arabidopsis_thalianaAT1G26530.185.955176.9663prunus_persicaONI2330577.272769.1919
AT1G26530arabidopsis_thalianaAT1G26530.180.898971.3483avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003112.172.361863.8191
AT1G26530arabidopsis_thalianaAT1G26530.181.460770.7865avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0001952.250.17343.5986
AT1G26530arabidopsis_thalianaAT1G26530.165.168553.3708avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003308.157.711447.2637
AT1G26530arabidopsis_thalianaAT1G26530.181.460770.7865avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0001931.153.703746.6667
AT1G26530arabidopsis_thalianaAT1G26530.180.898969.1011chenopodium_quinoaAUR62004429-RA:cds70.93660.5911
AT1G26530arabidopsis_thalianaAT1G26530.183.146171.9101chenopodium_quinoaAUR62022636-RA:cds74.747564.6465
AT1G26530arabidopsis_thalianaAT1G26530.180.898969.1011digitaria_exilisDexi4A01G0004240.1:cds65.454555.9091
AT1G26530arabidopsis_thalianaAT1G26530.182.022570.2247digitaria_exilisDexi4B01G0006660.1:cds73.366862.8141
AT1G26530arabidopsis_thalianaAT1G26530.180.337167.9775oryza_barthiiOBART06G03880.167.452857.0755
AT1G26530arabidopsis_thalianaAT1G26530.189.325881.4607brassica_oleraceaBo4g196100.169.736863.5965
AT1G26530arabidopsis_thalianaAT1G26530.185.955176.9663prunus_dulcisVVA2369752.758647.2414
AT1G26530arabidopsis_thalianaAT1G26530.167.415748.3146galdieria_sulphurariaEME3137960.913743.6548
AT1G26530arabidopsis_thalianaAT1G26530.176.404566.2921corylus_avellanaCav07g06900.t161.538553.3937
AT1G26530arabidopsis_thalianaAT1G26530.182.584371.3483leersia_perrieriLPERR08G12210.173.869363.8191
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.9663nicotiana_attenuataOIT0737740.419935.958
AT1G26530arabidopsis_thalianaAT1G26530.126.966319.6629olea_europaeaOE9A089285C143.636431.8182
AT1G26530arabidopsis_thalianaAT1G26530.184.831575.2809olea_europaeaOE9A098456C260.159453.3865
AT1G26530arabidopsis_thalianaAT1G26530.111.23610.6742olea_europaeaOE9A115724C14038
AT1G26530arabidopsis_thalianaAT1G26530.184.831575.2809olea_europaeaOE9A014302C160.159453.3865
AT1G26530arabidopsis_thalianaAT1G26530.164.606750saccharomyces_cerevisiaeYDR339C60.846647.0899
AT1G26530arabidopsis_thalianaAT1G26530.185.393378.0899pistacia_veracds-EVM0013414.176.767770.202
AT1G26530arabidopsis_thalianaAT1G26530.165.730351.6854drosophila_melanogasterFBpp007947058.546
AT1G26530arabidopsis_thalianaAT1G26530.189.325882.0225brassica_napusCDY6520881.122574.4898
AT1G26530arabidopsis_thalianaAT1G26530.188.202280.3371brassica_napusCDY4202176.213669.4175
AT1G26530arabidopsis_thalianaAT1G26530.187.078779.2135brassica_napusCDY2732669.506763.2287
AT1G26530arabidopsis_thalianaAT1G26530.189.325880.8989brassica_napusCDX7999981.122573.4694
AT1G26530arabidopsis_thalianaAT1G26530.160.112450.5618corchorus_capsularisOMO6436171.333360
AT1G26530arabidopsis_thalianaAT1G26530.180.898968.5393oryza_meridionalisOMERI06G04480.373.469462.2449
AT1G26530arabidopsis_thalianaAT1G26530.185.393376.4045malus_domestica_goldenmRNA:MD01G005580076.767768.6869
AT1G26530arabidopsis_thalianaAT1G26530.184.269775.8427daucus_carotaKZM9381075.757668.1818
AT1G26530arabidopsis_thalianaAT1G26530.142.134837.6404daucus_carotaKZN0453152.816947.1831
AT1G26530arabidopsis_thalianaAT1G26530.186.516976.4045rosa_chinensisPRQ5835677.777868.6869
AT1G26530arabidopsis_thalianaAT1G26530.185.393372.4719juglans_regiacds.Jr07_07870_p176.767765.1515
AT1G26530arabidopsis_thalianaAT1G26530.178.089966.8539nymphaea_colorataNC9G0112890.1:cds63.761554.5872
AT1G26530arabidopsis_thalianaAT1G26530.180.898970.2247setaria_italicaKQL0967465.454556.8182
AT1G26530arabidopsis_thalianaAT1G26530.182.022567.9775physcomitrium_patensPp3c7_15560V3.273.737461.1111
AT1G26530arabidopsis_thalianaAT1G26530.180.898966.2921physcomitrium_patensPp3c11_12810V3.272.727359.596
AT1G26530arabidopsis_thalianaAT1G26530.183.146174.1573vitis_viniferaVitvi15g04618_P00174.747566.6667
AT1G26530arabidopsis_thalianaAT1G26530.183.146174.1573vitis_viniferaVitvi15g04598_P00158.267751.9685
AT1G26530arabidopsis_thalianaAT1G26530.153.370842.1348cynara_cardunculusKVH9727747.263737.3134

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003674enables molecular_function1NDArabidopsis_thaliana(3702)Function
GO:0005634located_in nucleus1ISMArabidopsis_thaliana(3702)Component
GO:0008150involved_in biological_process1NDArabidopsis_thaliana(3702)Process

Expression