Description

Ensembl ID AT1G07830 Gene ID 837298 Accession -
Symbol AT1G07830 Alias - Full Name ribosomal protein L29 family protein
Status Confidence Length 1678 bases Strand Plus strand
Position 1 : 2422126 - 2423803 RNA binding domain MRP-L47 , Ribosomal_L29
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AT1G07830 MRP-L47 PF06984 6.2e-37 1
AT1G07830 Ribosomal_L29 PF00831 3.1e-13 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AT1G07830-201 AT1G07830 1113 144aa AT1G07830

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT1G07830

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AT1G07830arabidopsis_thalianaAT1G07830.150.694429.8611chondrus_crispusCDF4125044.512226.2195
AT1G07830arabidopsis_thalianaAT1G07830.163.888950.6944marchantia_polymorphaPTQ4690169.172954.8872
AT1G07830arabidopsis_thalianaAT1G07830.179.861172.2222papaver_somniferumRZC5404678.231370.7483
AT1G07830arabidopsis_thalianaAT1G07830.180.555672.2222papaver_somniferumRZC7339678.911670.7483
AT1G07830arabidopsis_thalianaAT1G07830.186.111177.0833cannabis_sativa_femalecds.novel_model_2972_5bd9a17a86.713377.6224
AT1G07830arabidopsis_thalianaAT1G07830.188.888979.1667ficus_caricaFCD_00032605-RA:cds80.503171.6981
AT1G07830arabidopsis_thalianaAT1G07830.182.638973.6111ficus_caricaFCD_00010804-RA:cds66.111158.8889
AT1G07830arabidopsis_thalianaAT1G07830.182.638973.6111theobroma_cacaoEOY2063285.611576.259
AT1G07830arabidopsis_thalianaAT1G07830.182.638972.9167beta_vulgarisKMT057958575
AT1G07830arabidopsis_thalianaAT1G07830.186.111179.1667cucumis_meloMELO3C017111.2.153.679749.3507
AT1G07830arabidopsis_thalianaAT1G07830.186.805679.8611cucumis_sativusKGN6360287.412680.4196
AT1G07830arabidopsis_thalianaAT1G07830.186.111174.3056populus_trichocarpaPotri.002G185800.1.v4.186.111174.3056
AT1G07830arabidopsis_thalianaAT1G07830.188.194479.1667populus_trichocarpaPotri.014G111100.1.v4.189.436680.2817
AT1G07830arabidopsis_thalianaAT1G07830.179.861171.5278solanum_lycopersicumSolyc03g114050.3.183.333374.6377
AT1G07830arabidopsis_thalianaAT1G07830.151.388931.25caenorhabditis_elegansB0261.4a.131.623919.2308
AT1G07830arabidopsis_thalianaAT1G07830.185.416772.2222lactuca_sativacds-PLY94158.186.01472.7273
AT1G07830arabidopsis_thalianaAT1G07830.145.833333.3333ostreococcus_lucimarinusABO9595768.7550
AT1G07830arabidopsis_thalianaAT1G07830.186.805679.8611citrullus_lanatusCla97C06G126430.185.616478.7671
AT1G07830arabidopsis_thalianaAT1G07830.184.027875vigna_radiataVradi03g09280.174.233166.2577
AT1G07830arabidopsis_thalianaAT1G07830.182.638972.2222amborella_trichopodaERN0219485.611574.8201
AT1G07830arabidopsis_thalianaAT1G07830.182.638974.3056vigna_unguiculataVigun09g072800.1.v1.283.802875.3521
AT1G07830arabidopsis_thalianaAT1G07830.181.944473.6111phaseolus_vulgarisESW1019483.098674.6479
AT1G07830arabidopsis_thalianaAT1G07830.161.111150.6944asparagus_officinalisONK7339486.274571.5686
AT1G07830arabidopsis_thalianaAT1G07830.181.944471.5278pisum_sativumPsat2g170440.1.cds82.517572.028
AT1G07830arabidopsis_thalianaAT1G07830.181.944465.9722brachypodium_distachyonKQK1966579.729764.1892
AT1G07830arabidopsis_thalianaAT1G07830.182.638972.9167quercus_subercds-POF00622.18575
AT1G07830arabidopsis_thalianaAT1G07830.179.166771.5278quercus_subercds-POE52474.181.428673.5714
AT1G07830arabidopsis_thalianaAT1G07830.179.166770.8333quercus_subercds-POE55635.169.512262.1951
AT1G07830arabidopsis_thalianaAT1G07830.197.222297.2222arabidopsis_lyratafgenesh2_kg.1__769__AT1G07830.197.902197.9021
AT1G07830arabidopsis_thalianaAT1G07830.182.638972.2222quercus_lobataQL10p013461:mrna23.658120.6759
AT1G07830arabidopsis_thalianaAT1G07830.161.805656.25quercus_lobataQL03p067058:mrna74.789968.0672
AT1G07830arabidopsis_thalianaAT1G07830.180.555672.2222quercus_lobataQL03p066954:mrna82.857174.2857
AT1G07830arabidopsis_thalianaAT1G07830.185.416775.6944lupinus_angustifoliusOIW1474682.550373.1544
AT1G07830arabidopsis_thalianaAT1G07830.194.444490.9722eutrema_salsugineumESQ4107893.793190.3448
AT1G07830arabidopsis_thalianaAT1G07830.195.138993.75eutrema_salsugineumESQ3611495.138993.75
AT1G07830arabidopsis_thalianaAT1G07830.194.444494.4444arabidopsis_hallerig31069.t195.104995.1049
AT1G07830arabidopsis_thalianaAT1G07830.197.222297.2222arabidopsis_hallerig02448.t197.902197.9021
AT1G07830arabidopsis_thalianaAT1G07830.195.833395.8333arabidopsis_hallerig32018.t196.503596.5035
AT1G07830arabidopsis_thalianaAT1G07830.182.638974.3056cajanus_cajanC.cajan_31216.t83.802875.3521
AT1G07830arabidopsis_thalianaAT1G07830.181.944472.2222solanum_tuberosumPGSC0003DMT40006290983.098673.2394
AT1G07830arabidopsis_thalianaAT1G07830.184.027872.2222setaria_viridisTKW1940383.448371.7241
AT1G07830arabidopsis_thalianaAT1G07830.181.2572.2222ipomoea_trilobaitb02g13040.t181.2572.2222
AT1G07830arabidopsis_thalianaAT1G07830.179.861166.6667zea_maysZm00001eb378540_P00283.333369.5652
AT1G07830arabidopsis_thalianaAT1G07830.184.027873.6111sesamum_indicumSIN_1020476.t87.050476.259
AT1G07830arabidopsis_thalianaAT1G07830.156.2545.8333chara_brauniiGBG7979363.281251.5625
AT1G07830arabidopsis_thalianaAT1G07830.188.194487.5arabis_alpinaKFK2436492.700791.9708
AT1G07830arabidopsis_thalianaAT1G07830.158.333356.9444arabis_alpinaKFK4309896.551794.2529
AT1G07830arabidopsis_thalianaAT1G07830.143.055629.8611ciona_savignyiENSCSAVP000000163494027.7419
AT1G07830arabidopsis_thalianaAT1G07830.192.361191.6667brassica_junceacds.BjuA09g02980S63.333362.8571
AT1G07830arabidopsis_thalianaAT1G07830.193.7593.0556brassica_junceacds.BjuB02g03360S78.947478.3626
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_brachyanthaOB06G11670.182.312968.7075
AT1G07830arabidopsis_thalianaAT1G07830.184.027875.6944glycine_maxKRH6337284.615476.2238
AT1G07830arabidopsis_thalianaAT1G07830.184.027874.3056glycine_maxKRH5453085.211375.3521
AT1G07830arabidopsis_thalianaAT1G07830.183.333375corymbia_citriodoracds-KAF8037153.153.097347.7876
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.0556aegilops_tauschiiAET7Gv20137200.172.561.25
AT1G07830arabidopsis_thalianaAT1G07830.179.166765.9722triticum_urartuTuG1812G0700000654.01.T0178.082265.0685
AT1G07830arabidopsis_thalianaAT1G07830.167.361159.0278triticum_urartuTuG1812S0002464400.01.T0188.990877.9817
AT1G07830arabidopsis_thalianaAT1G07830.156.944450.6944oryza_longistaminataKN538979.1_FGP01049.101843.7126
AT1G07830arabidopsis_thalianaAT1G07830.181.944474.3056fraxinus_excelsiorFRAEX38873_v2_000071080.1.cds83.098675.3521
AT1G07830arabidopsis_thalianaAT1G07830.179.166771.5278fraxinus_excelsiorFRAEX38873_v2_000347090.3.cds5751.5
AT1G07830arabidopsis_thalianaAT1G07830.182.638965.9722avena_sativa_sangAVESA.00010b.r2.5DG0946960.1.CDS80.405464.1892
AT1G07830arabidopsis_thalianaAT1G07830.184.027867.3611avena_sativa_sangAVESA.00010b.r2.7DG1336350.1.CDS82.876766.4384
AT1G07830arabidopsis_thalianaAT1G07830.181.944465.9722avena_sativa_sangAVESA.00010b.r2.6AG1062560.1.CDS79.729764.1892
AT1G07830arabidopsis_thalianaAT1G07830.182.638966.6667avena_sativa_sangAVESA.00010b.r2.5CG0866630.1.CDS79.865864.4295
AT1G07830arabidopsis_thalianaAT1G07830.182.638965.9722avena_sativa_sangAVESA.00010b.r2.4CG1261710.1.CDS80.405464.1892
AT1G07830arabidopsis_thalianaAT1G07830.184.722273.6111musa_acuminataMa04_p37010.184.137973.1034
AT1G07830arabidopsis_thalianaAT1G07830.184.027873.6111musa_acuminataMa02_p11770.181.208171.1409
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_glaberrimaORGLA06G0017300.183.448369.6552
AT1G07830arabidopsis_thalianaAT1G07830.178.472265.9722hordeum_vulgareHORVU.MOREX.r3.7HG0643190.179.02166.4336
AT1G07830arabidopsis_thalianaAT1G07830.178.472265.2778triticum_turgidumTRITD4Av1G247260.179.02165.7343
AT1G07830arabidopsis_thalianaAT1G07830.179.166766.6667triticum_turgidumTRITD7Av1G015210.178.082265.7534
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.75triticum_turgidumTRITD3Bv1G027970.18068.2759
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.75panicum_halliiPUZ6240684.671572.2628
AT1G07830arabidopsis_thalianaAT1G07830.184.027872.2222echinochloa_crusgalliscaffold10.40.cds70.760260.8187
AT1G07830arabidopsis_thalianaAT1G07830.184.722272.9167actinidia_chinensisPSR9668486.524874.4681
AT1G07830arabidopsis_thalianaAT1G07830.186.805675actinidia_chinensisPSR9586187.412675.5245
AT1G07830arabidopsis_thalianaAT1G07830.186.111173.6111actinidia_chinensisPSR9585986.713374.1259
AT1G07830arabidopsis_thalianaAT1G07830.184.722277.0833citrus_clementinaESR5299885.314777.6224
AT1G07830arabidopsis_thalianaAT1G07830.183.333369.4444oryza_indicaBGIOSGA022227-PA41.237134.3643
AT1G07830arabidopsis_thalianaAT1G07830.145.833334.0278selaginella_moellendorffiiEFJ151307555.6818
AT1G07830arabidopsis_thalianaAT1G07830.145.833334.7222selaginella_moellendorffiiEFJ084557556.8182
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_sativaOs06t0128500-0183.448369.6552
AT1G07830arabidopsis_thalianaAT1G07830.150.694434.0278homo_sapiensENSP0000041760229.219.6
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.0556triticum_aestivumTraesCS7D02G054700.18067.5862
AT1G07830arabidopsis_thalianaAT1G07830.176.388963.8889triticum_aestivumTraesCS7A02G060200.179.710166.6667
AT1G07830arabidopsis_thalianaAT1G07830.178.472265.2778triticum_aestivumTraesCS4A02G429200.179.02165.7343
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.0556triticum_aestivumTraesCS3B02G098500.18067.5862
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_rufipogonORUFI06G01670.183.448369.6552
AT1G07830arabidopsis_thalianaAT1G07830.179.166765.9722secale_cerealeSECCE4Rv1G0279330.178.620765.5172
AT1G07830arabidopsis_thalianaAT1G07830.186.111174.3056gossypium_raimondiiKJB5298485.517273.7931
AT1G07830arabidopsis_thalianaAT1G07830.183.333372.2222helianthus_annuusmRNA:HanXRQr2_Chr05g023011185.106473.7589
AT1G07830arabidopsis_thalianaAT1G07830.183.333372.9167helianthus_annuusmRNA:HanXRQr2_Chr05g023760183.916173.4266
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_punctataOPUNC06G01530.182.312968.7075
AT1G07830arabidopsis_thalianaAT1G07830.183.333369.4444eragrostis_tefEt_2A_015257.CDS83.333369.4444
AT1G07830arabidopsis_thalianaAT1G07830.181.2568.75eragrostis_tefEt_2B_022008.CDS62.23452.6596
AT1G07830arabidopsis_thalianaAT1G07830.181.944472.9167medicago_truncatulaAES9457186.131476.6423
AT1G07830arabidopsis_thalianaAT1G07830.183.333370.1389saccharum_spontaneumSspon.08G0016690-1A-mRNA-1:cds43.636436.7273
AT1G07830arabidopsis_thalianaAT1G07830.183.333370.1389saccharum_spontaneumSspon.08G0016690-2D-mRNA-1:cds82.758669.6552
AT1G07830arabidopsis_thalianaAT1G07830.184.027871.5278sorghum_bicolorEER8776182.876770.5479
AT1G07830arabidopsis_thalianaAT1G07830.180.555668.75triticum_dicoccoidesTRIDC3BG013710.18068.2759
AT1G07830arabidopsis_thalianaAT1G07830.171.527862.5triticum_dicoccoidesTRIDC4AG063600.182.472
AT1G07830arabidopsis_thalianaAT1G07830.165.277856.9444triticum_dicoccoidesTRIDC7AG006360.188.679277.3585
AT1G07830arabidopsis_thalianaAT1G07830.162.556.25coffea_canephoraCDP1910678.260970.4348
AT1G07830arabidopsis_thalianaAT1G07830.182.638976.3889coffea_canephoraCDP1807381.506975.3425
AT1G07830arabidopsis_thalianaAT1G07830.178.472268.75manihot_esculentaOAY2996582.481872.2628
AT1G07830arabidopsis_thalianaAT1G07830.181.944472.9167manihot_esculentaOAY3612984.285775
AT1G07830arabidopsis_thalianaAT1G07830.182.638972.2222kalanchoe_fedtschenkoiKaladp0101s0023.1.v1.185.611574.8201
AT1G07830arabidopsis_thalianaAT1G07830.181.944473.6111trifolium_pratenseTp57577_TGAC_v2_mRNA659985.507276.8116
AT1G07830arabidopsis_thalianaAT1G07830.182.638973.6111trifolium_pratenseTp57577_TGAC_v2_mRNA2168486.231976.8116
AT1G07830arabidopsis_thalianaAT1G07830.195.138993.75brassica_rapa_ro18A06p005810.1_BraROA.195.804294.4056
AT1G07830arabidopsis_thalianaAT1G07830.183.333374.3056eucalyptus_grandisKCW8341871.856364.0719
AT1G07830arabidopsis_thalianaAT1G07830.187.576.3889dioscorea_rotundataDRNTG_21994.187.576.3889
AT1G07830arabidopsis_thalianaAT1G07830.182.638970.1389prunus_persicaONI0842484.397271.6312
AT1G07830arabidopsis_thalianaAT1G07830.182.638965.9722avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0002860.171.257556.8862
AT1G07830arabidopsis_thalianaAT1G07830.180.555671.5278chenopodium_quinoaAUR62025410-RA:cds81.690172.5352
AT1G07830arabidopsis_thalianaAT1G07830.180.555670.8333chenopodium_quinoaAUR62008830-RA:cds81.690171.831
AT1G07830arabidopsis_thalianaAT1G07830.184.027872.9167digitaria_exilisDexi4B01G0001770.1:cds83.448372.4138
AT1G07830arabidopsis_thalianaAT1G07830.184.027872.2222digitaria_exilisDexi4A01G0001660.1:cds83.448371.7241
AT1G07830arabidopsis_thalianaAT1G07830.184.027870.1389oryza_barthiiOBART06G01660.183.448369.6552
AT1G07830arabidopsis_thalianaAT1G07830.193.7592.3611brassica_oleraceaBo8g112840.191.836790.4762
AT1G07830arabidopsis_thalianaAT1G07830.163.194456.25corylus_avellanaCav03g04260.t183.486274.3119
AT1G07830arabidopsis_thalianaAT1G07830.181.944468.75leersia_perrieriLPERR06G01470.179.729766.8919
AT1G07830arabidopsis_thalianaAT1G07830.181.944472.2222nicotiana_attenuataOIT0493582.517572.7273
AT1G07830arabidopsis_thalianaAT1G07830.177.083368.75olea_europaeaOE9A044628C356.632750.5102
AT1G07830arabidopsis_thalianaAT1G07830.176.388965.2778olea_europaeaOE9A108683C159.459550.8108
AT1G07830arabidopsis_thalianaAT1G07830.183.333372.9167olea_europaeaOE9A093888C184.50773.9437
AT1G07830arabidopsis_thalianaAT1G07830.177.777866.6667olea_europaeaOE9A089010C166.666757.1429
AT1G07830arabidopsis_thalianaAT1G07830.147.916729.8611saccharomyces_cerevisiaeYLR439W21.630113.4796
AT1G07830arabidopsis_thalianaAT1G07830.184.722275pistacia_veracds-EVM0010985.185.915576.0563
AT1G07830arabidopsis_thalianaAT1G07830.156.2536.8056drosophila_melanogasterFBpp008159929.889319.5572
AT1G07830arabidopsis_thalianaAT1G07830.195.138993.0556brassica_napusCDX9361593.835691.7808
AT1G07830arabidopsis_thalianaAT1G07830.194.444492.3611brassica_napusCDX9512094.444492.3611
AT1G07830arabidopsis_thalianaAT1G07830.192.361191.6667brassica_napusCDY0628193.00792.3077
AT1G07830arabidopsis_thalianaAT1G07830.193.7592.3611brassica_napusCDY2271891.836790.4762
AT1G07830arabidopsis_thalianaAT1G07830.178.472265.9722corchorus_capsularisOMO9185561.748651.9126
AT1G07830arabidopsis_thalianaAT1G07830.181.2572.9167corchorus_capsularisOMO8157582.394473.9437
AT1G07830arabidopsis_thalianaAT1G07830.198.611196.5278camelina_sativaCsa17g011260.197.260395.2055
AT1G07830arabidopsis_thalianaAT1G07830.196.527894.4444camelina_sativaCsa14g009230.197.202895.1049
AT1G07830arabidopsis_thalianaAT1G07830.198.611197.2222camelina_sativaCsa03g011280.197.260395.8904
AT1G07830arabidopsis_thalianaAT1G07830.170.833365.2778malus_domestica_goldenmRNA:MD06G014590090.265583.1858
AT1G07830arabidopsis_thalianaAT1G07830.181.944470.8333malus_domestica_goldenmRNA:MD14G016080058.415850.495
AT1G07830arabidopsis_thalianaAT1G07830.183.333375.6944daucus_carotaKZM9325184.50776.7606
AT1G07830arabidopsis_thalianaAT1G07830.183.333375daucus_carotaKZM9107385.106476.5957
AT1G07830arabidopsis_thalianaAT1G07830.158.333352.0833rosa_chinensisPRQ4491291.304381.5217
AT1G07830arabidopsis_thalianaAT1G07830.179.166770.8333rosa_chinensisPRQ1600380.851172.3404
AT1G07830arabidopsis_thalianaAT1G07830.182.638974.3056juglans_regiacds.Jr02_03920_p18576.4286
AT1G07830arabidopsis_thalianaAT1G07830.182.638970.8333nymphaea_colorataNC5G0048700.1:cds76.774265.8064
AT1G07830arabidopsis_thalianaAT1G07830.181.944474.3056vigna_angularisKOM5645583.098675.3521
AT1G07830arabidopsis_thalianaAT1G07830.184.027872.2222setaria_italicaKQL0909583.448371.7241
AT1G07830arabidopsis_thalianaAT1G07830.163.888947.9167physcomitrium_patensPp3c17_20320V3.270.769253.0769
AT1G07830arabidopsis_thalianaAT1G07830.183.333376.3889vitis_viniferaVitvi17g01532_P00385.714378.5714
AT1G07830arabidopsis_thalianaAT1G07830.17566.6667cynara_cardunculusKVH9895085.039475.5906

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005739located_in mitochondrion1ISMArabidopsis_thaliana(3702)Component
GO:0010468acts_upstream_of_or_within regulation of gene expression1IEAArabidopsis_thaliana(3702)Process
GO:0016070acts_upstream_of_or_within RNA metabolic process1IEAArabidopsis_thaliana(3702)Process
GO:0016071acts_upstream_of_or_within mRNA metabolic process1IEAArabidopsis_thaliana(3702)Process
GO:0018205acts_upstream_of_or_within peptidyl-lysine modification1IEAArabidopsis_thaliana(3702)Process
GO:0044085acts_upstream_of_or_within cellular component biogenesis1IEAArabidopsis_thaliana(3702)Process

Expression