| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AT1G04380 | Gene ID |
839535 |
Accession |
- |
| Symbol |
AT1G04380 |
Alias |
- |
Full Name |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Status |
Confidence |
Length |
1945 bases |
Strand |
Minus strand |
| Position |
1 : 1176544 - 1178488 |
RNA binding domain |
2OG-FeII_Oxy |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AT1G04380 |
2OG-FeII_Oxy |
PF03171 |
8.2e-27 |
1 |
| AT1G04380 |
2OG-FeII_Oxy |
PF03171 |
1.1e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| AT1G04380-202 |
AT1G04380 |
1528 |
345aa |
AT1G04380 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G04380 | arabidopsis_thaliana | AT5G43440.1 | 73.9726 | 60.274 | arabidopsis_thaliana | AT1G04380.1 | 78.2609 | 63.7681 |
| AT1G04380 | arabidopsis_thaliana | AT1G03400.2 | 59.6306 | 44.8549 | arabidopsis_thaliana | AT1G04380.1 | 65.5072 | 49.2754 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 50.7246 | 34.7826 | papaver_somniferum | RZC68886 | 63.1769 | 43.3213 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 59.7101 | 43.1884 | cannabis_sativa_female | cds.evm.model.07.48 | 58.3569 | 42.2096 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 29.8551 | 23.1884 | ficus_carica | FCD_00021622-RA:cds | 69.5946 | 54.0541 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 59.7101 | 41.1594 | theobroma_cacao | EOY05996 | 66.6667 | 45.9547 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 60.8696 | 45.7971 | theobroma_cacao | EOY05989 | 59.6591 | 44.8864 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 65.7971 | 43.7681 | cucumis_melo | MELO3C022978.2.1 | 60.3723 | 40.1596 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 65.7971 | 43.7681 | cucumis_sativus | KGN61614 | 60.3723 | 40.1596 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 68.6957 | 47.5362 | citrullus_lanatus | Cla97C06G116470.1 | 63.2 | 43.7333 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 57.3913 | 36.2319 | amborella_trichopoda | ERN14044 | 54.8476 | 34.626 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 43.4783 | 28.1159 | amborella_trichopoda | ERN05151 | 59.0551 | 38.189 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 62.6087 | 44.9275 | prunus_avium | Pav_sc0000027.1_g430.1.br:mrna | 66.8731 | 47.9876 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 62.029 | 45.2174 | prunus_avium | Pav_sc0000027.1_g410.1.br:mrna | 66.0494 | 48.1481 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 39.4203 | 30.1449 | pisum_sativum | Psat3g148360.1.cds | 71.2042 | 54.4503 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 66.3768 | 46.6667 | pisum_sativum | Psat3g147600.1.cds | 64.1457 | 45.098 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.4493 | 28.4058 | quercus_suber | cds-POF20610.1 | 48.3108 | 33.1081 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 27.8261 | 20.8696 | quercus_suber | cds-POE68780.1 | 73.2824 | 54.9618 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 42.8986 | 30.7246 | quercus_suber | cds-POF00791.1 | 70.4762 | 50.4762 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 65.7971 | 48.9855 | ananas_comosus | Aco006249.1.mrna1 | 40.8273 | 30.3957 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 66.9565 | 48.9855 | ananas_comosus | Aco010438.1.mrna1 | 39.6907 | 29.0378 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 95.3623 | 92.4638 | arabidopsis_lyrata | fgenesh2_kg.1__368__AT1G04380.1 | 95.0867 | 92.1965 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 90.1449 | 83.1884 | eutrema_salsugineum | ESQ36488 | 87.1148 | 80.3922 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 94.7826 | 91.5942 | arabidopsis_halleri | g02067.t1 | 94.5087 | 91.3295 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 64.9275 | 48.9855 | cajanus_cajan | C.cajan_40059.t | 69.1358 | 52.1605 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 24.6377 | 19.7101 | solanum_tuberosum | PGSC0003DMT400089650 | 77.2727 | 61.8182 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 44.6377 | 33.6232 | ipomoea_triloba | itb04g08010.t1 | 38.5965 | 29.0727 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 31.8841 | 22.3188 | ipomoea_triloba | itb13g18210.t1 | 65.0888 | 45.5621 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 64.3478 | 46.6667 | sesamum_indicum | SIN_1021803.t | 67.4772 | 48.9362 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 88.6957 | 79.7101 | arabis_alpina | KFK42775 | 85.4749 | 76.8156 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.4493 | 30.4348 | oryza_brachyantha | OB04G12420.1 | 65.5963 | 48.1651 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.7391 | 31.8841 | oryza_brachyantha | OB04G12440.1 | 72.3618 | 55.2764 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 40.2899 | 25.5072 | glycine_max | KRH46705 | 67.1498 | 42.5121 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 60 | 45.2174 | glycine_max | KRH43756 | 65.2997 | 49.2114 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 53.6232 | 38.8406 | glycine_max | KRH38583 | 62.9252 | 45.5782 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 49.8551 | 36.2319 | corymbia_citriodora | cds-KAF7846619.1 | 65.6489 | 47.7099 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 57.3913 | 40.8696 | corymbia_citriodora | cds-KAF8016435.1 | 60 | 42.7273 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 50.1449 | 35.942 | corymbia_citriodora | cds-KAF8040825.1 | 66.0305 | 47.3282 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 22.8986 | 17.6812 | aegilops_tauschii | AET2Gv20047200.1 | 71.1712 | 54.955 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 43.4783 | 33.6232 | oryza_longistaminata | KN539085.1_FGP010 | 71.7703 | 55.5024 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 19.1304 | 13.6232 | fraxinus_excelsior | FRAEX38873_v2_000350100.1.cds | 72.5275 | 51.6483 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 33.3333 | 23.4783 | avena_sativa_sang | AVESA.00010b.r2.2CG0324600.1.CDS | 74.6753 | 52.5974 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 33.0435 | 22.8986 | avena_sativa_sang | AVESA.00010b.r2.4CG1323900.1.CDS | 74.026 | 51.2987 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 33.3333 | 24.058 | avena_sativa_sang | AVESA.00010b.r2.2DG0357230.1.CDS | 73.7179 | 53.2051 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 39.1304 | 30.1449 | hordeum_vulgare | HORVU.MOREX.r3.3HG0315100.1 | 75.419 | 58.1006 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 31.5942 | 22.8986 | citrus_clementina | ESR33683 | 68.5535 | 49.6855 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 40.2899 | 29.5652 | citrus_clementina | ESR33713 | 66.5072 | 48.8038 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 58.5507 | 43.7681 | secale_cereale | SECCE6Rv1G0426250.1 | 62.9283 | 47.0405 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 59.7101 | 42.029 | gossypium_raimondii | KJB34540 | 61.1276 | 43.0267 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 68.1159 | 45.2174 | gossypium_raimondii | KJB38330 | 64.2076 | 42.623 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 59.4203 | 41.1594 | medicago_truncatula | KEH22661 | 40.5941 | 28.1188 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 25.7971 | 17.3913 | medicago_truncatula | AES80748 | 66.9173 | 45.1128 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.4493 | 30.7246 | triticum_dicoccoides | TRIDC2AG002710.1 | 69.7561 | 51.7073 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 40.2899 | 31.8841 | triticum_dicoccoides | TRIDC2AG002730.1 | 70.9184 | 56.1224 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.1594 | 31.3043 | coffea_canephora | CDO99211 | 56.5737 | 43.0279 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 42.8986 | 31.8841 | coffea_canephora | CDO99212 | 62.4473 | 46.4135 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.4493 | 31.5942 | coffea_canephora | CDO99210 | 71.8593 | 54.7739 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.1594 | 33.6232 | coffea_canephora | CDO99205 | 65.1376 | 53.211 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 18.2609 | 13.6232 | trifolium_pratense | Tp57577_TGAC_v2_mRNA33227 | 80.7692 | 60.2564 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 62.3188 | 54.7826 | brassica_rapa_ro18 | A10p003090.1_BraROA.1 | 80.5243 | 70.7865 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 63.1884 | 46.087 | eucalyptus_grandis | KCW88506 | 58.445 | 42.6273 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 63.7681 | 44.058 | eucalyptus_grandis | KCW60401 | 62.3229 | 43.0595 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 64.058 | 46.6667 | eucalyptus_grandis | KCW60387 | 64.2442 | 46.8023 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 61.1594 | 44.9275 | eucalyptus_grandis | KCW60407 | 63.5542 | 46.6867 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 58.5507 | 43.4783 | eucalyptus_grandis | KCW60386 | 70.1389 | 52.0833 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 28.6957 | 19.1304 | dioscorea_rotundata | DRNTG_29340.1 | 56.5714 | 37.7143 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 60.8696 | 44.9275 | prunus_persica | ONI26634 | 64.6154 | 47.6923 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 62.029 | 44.6377 | prunus_persica | ONI26636 | 66.4596 | 47.8261 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 62.029 | 45.5072 | prunus_persica | ONI26635 | 66.0494 | 48.4568 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 49.2754 | 36.2319 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.2Dg0002294.1 | 64.3939 | 47.3485 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 52.1739 | 34.7826 | chenopodium_quinoa | AUR62030585-RA:cds | 60 | 40 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 31.0145 | 24.3478 | digitaria_exilis | Dexi7A01G0001710.1:cds | 73.7931 | 57.931 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 51.8841 | 47.2464 | brassica_oleracea | Bo5g004530.1 | 95.2128 | 86.7021 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 61.7391 | 44.6377 | prunus_dulcis | VVA16051 | 66.1491 | 47.8261 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 60.8696 | 44.9275 | prunus_dulcis | VVA41716 | 64.8148 | 47.8395 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 61.7391 | 45.5072 | prunus_dulcis | VVA16050 | 65.7407 | 48.4568 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 34.7826 | 25.2174 | olea_europaea | OE9A069320C1 | 50.8475 | 36.8644 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 21.7391 | 16.8116 | olea_europaea | OE9A041451C1 | 70.0935 | 54.2056 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 86.087 | 78.2609 | brassica_napus | CDY60661 | 86.087 | 78.2609 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 89.5652 | 81.4493 | brassica_napus | CDY18226 | 87.0423 | 79.1549 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 89.8551 | 83.1884 | camelina_sativa | Csa14g005520.1 | 89.5954 | 82.948 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 60 | 44.3478 | malus_domestica_golden | mRNA:MD16G0187000 | 65.5063 | 48.4177 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 49.5652 | 32.4638 | malus_domestica_golden | mRNA:MD16G0229500 | 55.5195 | 36.3636 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 20.2899 | 15.3623 | daucus_carota | KZM96634 | 82.3529 | 62.3529 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 23.1884 | 16.2319 | vitis_vinifera | Vitvi05g04226_P001 | 64.5161 | 45.1613 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 41.1594 | 30.4348 | cynara_cardunculus | KVE74425 | 70.297 | 51.9802 |
| AT1G04380 | arabidopsis_thaliana | AT1G04380.1 | 40 | 27.2464 | cynara_cardunculus | KVH96371 | 62.1622 | 42.3423 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0005737 | located_in cytoplasm | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0016706 | enables 2-oxoglutarate-dependent dioxygenase activity | 1 | ISS | Arabidopsis_thaliana(3702) | Function |
