| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AT1G02400 | Gene ID |
839508 |
Accession |
- |
| Symbol |
GA2OX6 |
Alias |
- |
Full Name |
gibberellin 2-oxidase 6 |
| Status |
Confidence |
Length |
2852 bases |
Strand |
Plus strand |
| Position |
1 : 486800 - 489651 |
RNA binding domain |
2OG-FeII_Oxy |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AT1G02400 |
2OG-FeII_Oxy |
PF03171 |
8.5e-23 |
1 |
| AT1G02400 |
2OG-FeII_Oxy |
PF03171 |
4.3e-13 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| GA2OX6-202 |
AT1G02400 |
1479 |
265aa |
AT1G02400 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G02400 | arabidopsis_thaliana | AT1G47990.1 | 62.6168 | 50.4673 | arabidopsis_thaliana | AT1G02400.1 | 61.0942 | 49.2401 |
| AT1G02400 | arabidopsis_thaliana | AT1G30040.1 | 60.1173 | 41.349 | arabidopsis_thaliana | AT1G02400.1 | 62.31 | 42.8571 |
| AT1G02400 | arabidopsis_thaliana | AT1G78440.1 | 58.6626 | 43.465 | arabidopsis_thaliana | AT1G02400.1 | 58.6626 | 43.465 |
| AT1G02400 | arabidopsis_thaliana | AT2G34555.1 | 59.1045 | 42.6866 | arabidopsis_thaliana | AT1G02400.1 | 60.1824 | 43.465 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 67.4772 | 56.535 | cannabis_sativa_female | cds.evm.model.01.595 | 62.0112 | 51.9553 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 70.5167 | 60.4863 | theobroma_cacao | EOX95361 | 68.6391 | 58.8757 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 65.0456 | 53.4954 | beta_vulgaris | KMT10040 | 65.2439 | 53.6585 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 67.4772 | 52.2796 | cucumis_melo | MELO3C023635.2.1 | 58.8859 | 45.6233 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 53.4954 | 38.6018 | cucumis_sativus | KGN58126 | 51.462 | 37.1345 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.693 | 53.4954 | cucumis_sativus | KGN45038 | 68.2779 | 53.1722 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 64.7416 | 51.0638 | lactuca_sativa | cds-PLY73086.1 | 63.2047 | 49.8516 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 65.9574 | 49.2401 | citrullus_lanatus | Cla97C10G194450.1 | 64.0118 | 47.7876 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.3891 | 53.7994 | citrullus_lanatus | Cla97C09G167300.1 | 68.3891 | 53.7994 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 26.4438 | 21.8845 | amborella_trichopoda | ERN03292 | 56.129 | 46.4516 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 96.9605 | 95.4407 | arabidopsis_lyrata | Al_scaffold_0001_155 | 96.9605 | 95.4407 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 95.1368 | 90.5775 | eutrema_salsugineum | ESQ36700 | 95.1368 | 90.5775 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 96.6565 | 95.7447 | arabidopsis_halleri | g01851.t1 | 96.6565 | 95.7447 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 66.5653 | 55.6231 | cajanus_cajan | C.cajan_42477.t | 68.652 | 57.3668 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 70.2128 | 58.3587 | glycine_max | KRG96560 | 67.3469 | 55.9767 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 70.2128 | 57.1429 | fraxinus_excelsior | FRAEX38873_v2_000309190.1.cds | 67.7419 | 55.132 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 67.4772 | 56.8389 | actinidia_chinensis | PSS14745 | 66.0714 | 55.6548 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 70.5167 | 59.5745 | gossypium_raimondii | KJB09498 | 68.4366 | 57.8171 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.0851 | 58.0547 | gossypium_raimondii | KJB22480 | 67.2673 | 57.3574 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 71.4286 | 59.5745 | gossypium_raimondii | KJB49777 | 69.1176 | 57.6471 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.0851 | 51.3678 | helianthus_annuus | mRNA:HanXRQr2_Chr10g0426151 | 67.6737 | 51.0574 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 65.6535 | 55.3191 | coffea_canephora | CDP17015 | 65.0602 | 54.8193 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 93.0091 | 86.9301 | brassica_rapa_ro18 | A08p046420.1_BraROA.1 | 68.4564 | 63.9821 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 64.7416 | 52.2796 | chenopodium_quinoa | AUR62024597-RA:cds | 56.4987 | 45.6233 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 66.2614 | 54.4073 | chenopodium_quinoa | AUR62011753-RA:cds | 66.8712 | 54.908 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 93.3131 | 88.4498 | brassica_oleracea | Bo5g003140.1 | 93.3131 | 88.4498 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 93.3131 | 87.538 | brassica_oleracea | Bo4g014750.1 | 93.3131 | 87.538 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 71.7325 | 60.4863 | corylus_avellana | Cav02g15990.t1 | 69.4118 | 58.5294 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 71.7325 | 60.4863 | corylus_avellana | Cav02g16000.t1 | 69.4118 | 58.5294 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 41.9453 | 34.6505 | nicotiana_attenuata | OIT08164 | 57.2614 | 47.3029 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 93.3131 | 87.538 | brassica_napus | CDY64997 | 93.3131 | 87.538 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 70.8207 | 60.7903 | corchorus_capsularis | OMP05310 | 69.7605 | 59.8802 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 71.4286 | 58.6626 | malus_domestica_golden | mRNA:MD17G0238200 | 65.4596 | 53.7604 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 44.0729 | 37.386 | malus_domestica_golden | mRNA:MD09G0244600 | 61.4407 | 52.1186 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.693 | 52.8875 | daucus_carota | KZM95019 | 64.2045 | 49.4318 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 68.0851 | 54.1033 | daucus_carota | KZN03568 | 63.4561 | 50.4249 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 46.5046 | 35.5623 | daucus_carota | KZN10253 | 58.1749 | 44.4867 |
| AT1G02400 | arabidopsis_thaliana | AT1G02400.1 | 62.614 | 48.6322 | nymphaea_colorata | NC10G0167080.1:cds | 61.8619 | 48.048 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0005737 | located_in cytoplasm | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0009507 | located_in chloroplast | 1 | ISM | Arabidopsis_thaliana(3702) | Component |
| GO:0009639 | acts_upstream_of_or_within response to red or far red light | 1 | IEP | Arabidopsis_thaliana(3702) | Process |
| GO:0009686 | involved_in gibberellin biosynthetic process | 1 | IEA | Arabidopsis_thaliana(3702) | Process |
| GO:0045487 | acts_upstream_of_or_within gibberellin catabolic process | 1 | IDA | Arabidopsis_thaliana(3702) | Process |
| GO:0052634 | enables C-19 gibberellin 2-beta-dioxygenase activity | 1 | IDA | Arabidopsis_thaliana(3702) | Function |
| GO:0052635 | NOT enables C-20 gibberellin 2-beta-dioxygenase activity | 1 | IDA | Arabidopsis_thaliana(3702) | Function |
