Description

Ensembl ID AMTR_s00130p00080480 Gene ID Accession -
Symbol Alias - Full Name Ribosomal protein L1p/L10e family
Status Confidence Length 17785 bases Strand Minus strand
Position AmTr_v1.0_scaffold00130 : 894296 - 912080 RNA binding domain Ribosomal_L1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERM97660 Ribosomal_L1 PF00687 5.4e-46 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERM97660 1452 483aa ERM97660

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00130p00080480

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00130p00080480amborella_trichopodaERM9766063.14753.4161papaver_somniferumRZC6898966.448856.2092
AMTR_s00130p00080480amborella_trichopodaERM9766063.768153.4161papaver_somniferumRZC7421766.956556.087
AMTR_s00130p00080480amborella_trichopodaERM9766050.103538.9234ficus_caricaFCD_00022745-RA:cds59.753146.4198
AMTR_s00130p00080480amborella_trichopodaERM9766055.486544.0994beta_vulgarisKMT0379367.506353.6524
AMTR_s00130p00080480amborella_trichopodaERM9766057.97143.0642theobroma_cacaoEOX9287664.965248.2599
AMTR_s00130p00080480amborella_trichopodaERM9766055.693643.6853cucumis_meloMELO3C017830.2.163.443449.7642
AMTR_s00130p00080480amborella_trichopodaERM9766056.314742.8571arabidopsis_thalianaAT2G42710.165.542249.8795
AMTR_s00130p00080480amborella_trichopodaERM9766055.072540.9938populus_trichocarpaPotri.014G143000.9.v4.167.002549.8741
AMTR_s00130p00080480amborella_trichopodaERM9766055.900643.6853cucumis_sativusKGN5294863.679249.7642
AMTR_s00130p00080480amborella_trichopodaERM9766054.865441.4079brassica_junceacds.BjuB06g55720S68.123451.4139
AMTR_s00130p00080480amborella_trichopodaERM9766054.658441.6149brassica_junceacds.BjuA05g02950S68.041251.8041
AMTR_s00130p00080480amborella_trichopodaERM9766054.658441.6149brassica_napusCDX7984668.041251.8041
AMTR_s00130p00080480amborella_trichopodaERM9766054.658441.6149brassica_napusCDY5081968.041251.8041
AMTR_s00130p00080480amborella_trichopodaERM9766057.97142.8571prunus_persicaONI1668764.220247.4771
AMTR_s00130p00080480amborella_trichopodaERM9766055.072540.7868cajanus_cajanC.cajan_23422.t65.67948.642
AMTR_s00130p00080480amborella_trichopodaERM9766058.178143.0642malus_domestica_goldenmRNA:MD11G000420065.80848.7119
AMTR_s00130p00080480amborella_trichopodaERM9766057.76442.236malus_domestica_goldenmRNA:MD17G022700065.03547.5524
AMTR_s00130p00080480amborella_trichopodaERM9766055.072542.029glycine_maxKRH2579565.196149.7549
AMTR_s00130p00080480amborella_trichopodaERM9766056.314743.2712glycine_maxKRH5572368.170452.381
AMTR_s00130p00080480amborella_trichopodaERM9766057.97142.4431prunus_dulcisVVA3663364.220247.0183
AMTR_s00130p00080480amborella_trichopodaERM9766056.521741.8219medicago_truncatulaAES8980067.076249.6315
AMTR_s00130p00080480amborella_trichopodaERM9766056.521741.8219lupinus_angustifoliusOIW0831165.467648.4412
AMTR_s00130p00080480amborella_trichopodaERM9766050.517638.9234physcomitrium_patensPp3c20_12680V3.167.966652.3677
AMTR_s00130p00080480amborella_trichopodaERM9766054.658442.4431phaseolus_vulgarisESW0482665.185250.6173
AMTR_s00130p00080480amborella_trichopodaERM9766055.072539.7516pisum_sativumPsat7g163880.2.cds63.333345.7143
AMTR_s00130p00080480amborella_trichopodaERM9766055.072542.8571vigna_angularisKOM5007063.484549.4033
AMTR_s00130p00080480amborella_trichopodaERM9766055.900642.8571vigna_unguiculataVigun11g087200.1.v1.266.831751.2376
AMTR_s00130p00080480amborella_trichopodaERM9766054.865441.2008manihot_esculentaOAY6069463.397147.6077
AMTR_s00130p00080480amborella_trichopodaERM9766052.79541.4079solanum_lycopersicumSolyc12g013990.2.135.367527.7393
AMTR_s00130p00080480amborella_trichopodaERM9766049.482437.8882capsicum_annuumPHT6972432.384824.7967
AMTR_s00130p00080480amborella_trichopodaERM9766040.165631.0559vigna_radiataVradi02g09590.153.005540.9836
AMTR_s00130p00080480amborella_trichopodaERM9766046.997935.1967sesamum_indicumSIN_1019272.t71.383653.4591
AMTR_s00130p00080480amborella_trichopodaERM9766058.178141.8219lactuca_sativacds-PLY72946.165.80847.3068
AMTR_s00130p00080480amborella_trichopodaERM9766056.728841.6149helianthus_annuusmRNA:HanXRQr2_Chr09g039237166.343848.6683
AMTR_s00130p00080480amborella_trichopodaERM9766062.111851.1387avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0001677.167.873355.8824
AMTR_s00130p00080480amborella_trichopodaERM9766062.318851.7598avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0001947.268.25456.6893
AMTR_s00130p00080480amborella_trichopodaERM9766062.111851.3458avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0002921.167.873356.1086
AMTR_s00130p00080480amborella_trichopodaERM9766059.213247.205lolium_perennecds.KYUSt_chr7.1669663.274350.4425
AMTR_s00130p00080480amborella_trichopodaERM9766042.02936.646oryza_longistaminataKN538754.1_FGP00382.857172.2449
AMTR_s00130p00080480amborella_trichopodaERM9766062.318851.7598avena_sativa_sangAVESA.00010b.r2.7DG1360020.1.CDS73.955861.4251
AMTR_s00130p00080480amborella_trichopodaERM9766062.111851.1387avena_sativa_sangAVESA.00010b.r2.4CG1286120.1.CDS73.529460.5392
AMTR_s00130p00080480amborella_trichopodaERM9766062.318851.1387avena_sativa_sangAVESA.00010b.r2.7AG1247680.1.CDS73.774560.5392
AMTR_s00130p00080480amborella_trichopodaERM9766052.58843.6853oryza_rufipogonORUFI06G18860.279.37565.9375
AMTR_s00130p00080480amborella_trichopodaERM9766051.138743.2712oryza_brachyanthaOB06G25440.148.526541.0609
AMTR_s00130p00080480amborella_trichopodaERM9766061.490749.6894oryza_punctataOPUNC06G16100.172.087458.2524
AMTR_s00130p00080480amborella_trichopodaERM9766060.869650.9317setaria_italicaKQL1093071.186459.5642
AMTR_s00130p00080480amborella_trichopodaERM9766061.283651.1387setaria_viridisTKW2179971.670759.8063
AMTR_s00130p00080480amborella_trichopodaERM9766060.869649.6894sorghum_bicolorEER8989671.707358.5366
AMTR_s00130p00080480amborella_trichopodaERM9766061.490751.1387triticum_turgidumTRITD7Av1G189320.172.794160.5392
AMTR_s00130p00080480amborella_trichopodaERM9766062.525950.9317triticum_turgidumTRITD7Bv1G155090.274.019660.2941
AMTR_s00130p00080480amborella_trichopodaERM9766062.525950.7246secale_cerealeSECCE7Rv1G0501420.174.019660.049
AMTR_s00130p00080480amborella_trichopodaERM9766062.318850.5176triticum_aestivumTraesCS7D02G370500.173.774559.8039
AMTR_s00130p00080480amborella_trichopodaERM9766062.525950.9317triticum_aestivumTraesCS7B02G275500.174.019660.2941
AMTR_s00130p00080480amborella_trichopodaERM9766061.490750.9317triticum_aestivumTraesCS7A02G352600.172.794160.2941
AMTR_s00130p00080480amborella_trichopodaERM9766059.834449.2754zea_maysZm00001eb383810_P00170.660158.1907
AMTR_s00130p00080480amborella_trichopodaERM9766043.478339.3375ananas_comosusAco010012.1.mrna183.333375.3968
AMTR_s00130p00080480amborella_trichopodaERM9766056.728845.5487chenopodium_quinoaAUR62034062-RA:cds70.618656.701
AMTR_s00130p00080480amborella_trichopodaERM9766055.693644.7205chenopodium_quinoaAUR62033012-RA:cds69.50955.814
AMTR_s00130p00080480amborella_trichopodaERM9766046.583935.4037chara_brauniiGBG8233241.899431.8436
AMTR_s00130p00080480amborella_trichopodaERM9766055.072541.6149arabis_alpinaKFK3712065.67949.6296
AMTR_s00130p00080480amborella_trichopodaERM9766053.002139.9586corylus_avellanaCav05g09160.t163.523647.8908
AMTR_s00130p00080480amborella_trichopodaERM9766052.173938.9234corylus_avellanaCav05g09220.t164.450148.0818
AMTR_s00130p00080480amborella_trichopodaERM9766061.904850.1035brachypodium_distachyonKQK1829273.827259.7531
AMTR_s00130p00080480amborella_trichopodaERM9766060.869649.4824oryza_glumipatulaOGLUM06G18980.171.186457.8693
AMTR_s00130p00080480amborella_trichopodaERM9766061.076649.4824oryza_meridionalisOMERI06G18470.270.743457.3141
AMTR_s00130p00080480amborella_trichopodaERM9766056.521742.029ipomoea_trilobaitb02g08670.t164.53947.9905
AMTR_s00130p00080480amborella_trichopodaERM9766054.451342.8571kalanchoe_fedtschenkoiKaladp0083s0040.1.v1.163.069549.6403
AMTR_s00130p00080480amborella_trichopodaERM9766061.697751.1387triticum_urartuTuG1812G0700003814.01.T0173.039260.5392
AMTR_s00130p00080480amborella_trichopodaERM9766058.178144.9275eucalyptus_grandisKCW4735462.168148.0089
AMTR_s00130p00080480amborella_trichopodaERM9766055.693640.7868cynara_cardunculusKVH0803462.850546.028
AMTR_s00130p00080480amborella_trichopodaERM9766053.209140.3727trifolium_pratenseTp57577_TGAC_v2_mRNA1427063.14547.9115
AMTR_s00130p00080480amborella_trichopodaERM9766054.451342.6501gossypium_raimondiiKJB3225067.091852.551
AMTR_s00130p00080480amborella_trichopodaERM9766055.486542.4431arabidopsis_lyratafgenesh2_kg.4__2426__AT2G42710.166.832951.1222
AMTR_s00130p00080480amborella_trichopodaERM9766060.869649.2754oryza_barthiiOBART06G17840.162.156450.3171
AMTR_s00130p00080480amborella_trichopodaERM9766057.349946.5839asparagus_officinalisONK8199766.109853.6993
AMTR_s00130p00080480amborella_trichopodaERM9766061.076651.3458musa_acuminataMa02_p21200.171.776260.3406
AMTR_s00130p00080480amborella_trichopodaERM9766055.486542.236arabidopsis_hallerig17354.t165.847750.1228
AMTR_s00130p00080480amborella_trichopodaERM9766053.830244.7205eragrostis_tefEt_2A_017371.CDS77.611964.4776
AMTR_s00130p00080480amborella_trichopodaERM9766062.732950.5176eragrostis_tefEt_2B_021351.CDS74.083159.6577
AMTR_s00130p00080480amborella_trichopodaERM9766046.169836.2319corymbia_citriodoracds-KAF7851218.168.615453.8462
AMTR_s00130p00080480amborella_trichopodaERM9766055.693643.0642rosa_chinensisPRQ5016667.2552
AMTR_s00130p00080480amborella_trichopodaERM9766056.521744.5135juglans_regiacds.Jr01_23660_p164.845651.0689
AMTR_s00130p00080480amborella_trichopodaERM9766060.455549.4824saccharum_spontaneumSspon.08G0007720-2B-mRNA-1:cds71.393658.4352
AMTR_s00130p00080480amborella_trichopodaERM9766054.658444.3064saccharum_spontaneumSspon.08G0007720-2P-mRNA-1:cds70.967757.5269
AMTR_s00130p00080480amborella_trichopodaERM9766061.283650.7246triticum_dicoccoidesTRIDC7AG049220.272.54960.049
AMTR_s00130p00080480amborella_trichopodaERM9766062.525950.9317triticum_dicoccoidesTRIDC7BG044640.170.232657.2093
AMTR_s00130p00080480amborella_trichopodaERM9766054.658441.6149brassica_oleraceaBo4g017350.168.041251.8041
AMTR_s00130p00080480amborella_trichopodaERM9766061.076649.4824oryza_indicaBGIOSGA023067-PA70.743457.3141
AMTR_s00130p00080480amborella_trichopodaERM9766059.420348.8613dioscorea_rotundataDRNTG_21229.273.02860.0509
AMTR_s00130p00080480amborella_trichopodaERM9766060.869650.1035leersia_perrieriLPERR06G14730.171.707359.0244
AMTR_s00130p00080480amborella_trichopodaERM9766054.865440.5797olea_europaeaOE9A013994C263.397146.89
AMTR_s00130p00080480amborella_trichopodaERM9766055.693644.5135actinidia_chinensisPSR9526763.744150.9479
AMTR_s00130p00080480amborella_trichopodaERM9766053.209137.6812prunus_aviumPav_sc0000067.1_g090.1.mk:mrna62.530444.2822
AMTR_s00130p00080480amborella_trichopodaERM9766058.799246.1698quercus_subercds-POF25023.166.823552.4706
AMTR_s00130p00080480amborella_trichopodaERM9766056.314743.2712nicotiana_attenuataOIS9906064.916549.8807
AMTR_s00130p00080480amborella_trichopodaERM9766052.58839.7516citrus_clementinaESR6005265.633149.6124
AMTR_s00130p00080480amborella_trichopodaERM9766054.658441.6149brassica_rapa_ro18A05p004570.1_BraROA.168.041251.8041
AMTR_s00130p00080480amborella_trichopodaERM9766065.010454.8654nymphaea_colorataNC1G0179210.1:cds65.010454.8654
AMTR_s00130p00080480amborella_trichopodaERM9766049.896537.2671coffea_canephoraCDP1594560.552845.2261
AMTR_s00130p00080480amborella_trichopodaERM9766057.142945.7557aegilops_tauschiiAET7Gv20917100.571.317857.1059
AMTR_s00130p00080480amborella_trichopodaERM9766055.072541.6149pistacia_veracds-EVM0014850.163.942348.3173
AMTR_s00130p00080480amborella_trichopodaERM9766052.173939.3375pistacia_veracds-EVM0021384.164.450148.5933
AMTR_s00130p00080480amborella_trichopodaERM9766060.455550.1035digitaria_exilisDexi4B01G0014910.1:cds69.856557.8947
AMTR_s00130p00080480amborella_trichopodaERM9766059.834449.4824digitaria_exilisDexi4A01G0014860.1:cds72.2559.75
AMTR_s00130p00080480amborella_trichopodaERM9766026.29418.2195oryza_sativaOs06t0546400-0154.978438.0952
AMTR_s00130p00080480amborella_trichopodaERM9766061.283650.9317panicum_halliiPUZ6036772.195160
AMTR_s00130p00080480amborella_trichopodaERM9766055.072542.8571quercus_lobataQL08p042161:mrna61.290347.6959
AMTR_s00130p00080480amborella_trichopodaERM9766062.318850.3106eragrostis_curvulaTVU0780074.50560.1485
AMTR_s00130p00080480amborella_trichopodaERM9766062.111850.1035eragrostis_curvulaTVT9832164.239851.8201
AMTR_s00130p00080480amborella_trichopodaERM9766056.107742.4431camelina_sativaCsa04g059300.166.097650
AMTR_s00130p00080480amborella_trichopodaERM9766055.900642.4431camelina_sativaCsa06g048870.165.853750
AMTR_s00130p00080480amborella_trichopodaERM9766056.521742.4431camelina_sativaCsa05g008870.166.748250.1222
AMTR_s00130p00080480amborella_trichopodaERM9766040.372724.8447camelina_sativaCsa06g025700.130.232618.6047
AMTR_s00130p00080480amborella_trichopodaERM9766046.376831.677camelina_sativaCsa04g053620.128.681219.5903
AMTR_s00130p00080480amborella_trichopodaERM9766050.517635.8178selaginella_moellendorffiiEFJ3239323.804916.878
AMTR_s00130p00080480amborella_trichopodaERM9766050.931736.646selaginella_moellendorffiiEFJ2085125.38718.2663
AMTR_s00130p00080480amborella_trichopodaERM9766059.627349.4824vitis_viniferaVitvi12g00164_P00167.132955.711
AMTR_s00130p00080480amborella_trichopodaERM9766056.521743.0642eutrema_salsugineumESQ5299467.407451.358
AMTR_s00130p00080480amborella_trichopodaERM9766063.14752.1739echinochloa_crusgalliscaffold186.66.cds73.671560.8696
AMTR_s00130p00080480amborella_trichopodaERM9766062.9451.7598echinochloa_crusgalliscaffold245.72.cds6452.6316
AMTR_s00130p00080480amborella_trichopodaERM9766062.9451.7598echinochloa_crusgalliscaffold33.262.cds73.4360.3865
AMTR_s00130p00080480amborella_trichopodaERM9766055.072542.8571corchorus_capsularisOMO8386462.004748.2517
AMTR_s00130p00080480amborella_trichopodaERM9766053.209138.9234fraxinus_excelsiorFRAEX38873_v2_000307530.1.cds61.483344.9761
AMTR_s00130p00080480amborella_trichopodaERM9766030.848921.7391fraxinus_excelsiorFRAEX38873_v2_000131260.1.cds41.046828.9256
AMTR_s00130p00080480amborella_trichopodaERM9766056.314744.0994citrullus_lanatusCla97C07G138830.164.150950.2358
AMTR_s00130p00080480amborella_trichopodaERM9766060.869649.2754oryza_nivaraONIVA06G21240.170.503657.0743

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression