Description

Ensembl ID AMTR_s00092p00120100 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 6259 bases Strand Minus strand
Position AmTr_v1.0_scaffold00092 : 1579431 - 1585689 RNA binding domain dsRBD2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERM99227 dsRBD2 PF17842 1.1e-39 1
ERM99227 dsRBD2 PF17842 1.1e-39 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERM99227 2367 788aa ERM99227

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00092p00120100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00092p00120100amborella_trichopodaERM9922761.040644.797papaver_somniferumRZC4834451.33437.6734
AMTR_s00092p00120100amborella_trichopodaERM9922763.071146.7005papaver_somniferumRZC4706953.498439.6125
AMTR_s00092p00120100amborella_trichopodaERM9922752.284333.7563marchantia_polymorphaPTQ4878440.471526.1297
AMTR_s00092p00120100amborella_trichopodaERM9922759.898542.132cannabis_sativa_femalecds.evm.model.09.130845.297531.8618
AMTR_s00092p00120100amborella_trichopodaERM9922761.421344.6701ficus_caricaFCD_00021153-RA:cds51.216937.2487
AMTR_s00092p00120100amborella_trichopodaERM9922761.167542.2589beta_vulgarisKMT0392249.690734.3299
AMTR_s00092p00120100amborella_trichopodaERM9922762.944245.3046theobroma_cacaoEOY2553951.991637.4214
AMTR_s00092p00120100amborella_trichopodaERM9922732.360419.0355chlamydomonas_reinhardtiiPNW8553514.45588.5034
AMTR_s00092p00120100amborella_trichopodaERM9922760.53342.132cucumis_meloMELO3C002826.2.150.316535.0211
AMTR_s00092p00120100amborella_trichopodaERM9922741.497529.0609arabidopsis_thalianaAT4G20920.243.08330.1713
AMTR_s00092p00120100amborella_trichopodaERM9922756.091438.8325arabidopsis_thalianaAT4G20910.246.921432.4841
AMTR_s00092p00120100amborella_trichopodaERM9922762.309646.5736populus_trichocarpaPotri.011G163600.4.v4.150.880838.0311
AMTR_s00092p00120100amborella_trichopodaERM9922763.959447.7157populus_trichocarpaPotri.001G465500.1.v4.152.941239.4958
AMTR_s00092p00120100amborella_trichopodaERM9922760.53341.6244cucumis_sativusKGN6591246.810632.1884
AMTR_s00092p00120100amborella_trichopodaERM9922755.710739.0863brassica_junceacds.BjuB05g49270S21.862615.3386
AMTR_s00092p00120100amborella_trichopodaERM9922737.690423.8579brassica_junceacds.BjuA01g33730S41.022125.9669
AMTR_s00092p00120100amborella_trichopodaERM9922754.822339.0863brassica_junceacds.BjuB03g40810S31.578922.5146
AMTR_s00092p00120100amborella_trichopodaERM9922755.456938.7056brassica_junceacds.BjuA01g33740S47.039832.831
AMTR_s00092p00120100amborella_trichopodaERM9922754.949238.7056brassica_napusCDX7901447.951333.7763
AMTR_s00092p00120100amborella_trichopodaERM9922754.949239.0863brassica_napusCDX8278947.898234.0708
AMTR_s00092p00120100amborella_trichopodaERM9922753.299538.198brassica_napusCDX7901645.454532.5758
AMTR_s00092p00120100amborella_trichopodaERM9922753.680237.4365brassica_napusCDX8279145.240631.5508
AMTR_s00092p00120100amborella_trichopodaERM9922738.071124.7462brassica_napusCDX7901544.776129.1045
AMTR_s00092p00120100amborella_trichopodaERM9922738.578725.1269brassica_napusCDX8279044.970429.2899
AMTR_s00092p00120100amborella_trichopodaERM9922762.182745.0508prunus_persicaONI1118652.01737.6858
AMTR_s00092p00120100amborella_trichopodaERM9922751.903638.9594cajanus_cajanC.cajan_26656.t52.979339.7668
AMTR_s00092p00120100amborella_trichopodaERM9922762.944245.4315malus_domestica_goldenmRNA:MD05G022850048.202134.7911
AMTR_s00092p00120100amborella_trichopodaERM9922762.436544.6701malus_domestica_goldenmRNA:MD10G021090050.931736.4389
AMTR_s00092p00120100amborella_trichopodaERM9922761.167543.2741glycine_maxKRH5841850.471235.7068
AMTR_s00092p00120100amborella_trichopodaERM9922761.548243.401glycine_maxKRH4229651.322836.1905
AMTR_s00092p00120100amborella_trichopodaERM9922762.055845.0508prunus_dulcisVVA2934151.910837.6858
AMTR_s00092p00120100amborella_trichopodaERM9922761.040642.7665medicago_truncatulaKEH3134650.845735.6237
AMTR_s00092p00120100amborella_trichopodaERM9922761.548243.6548lupinus_angustifoliusOIW0311152.947637.5546
AMTR_s00092p00120100amborella_trichopodaERM9922748.604131.0914physcomitrium_patensPp3c1_60V3.637.512223.9961
AMTR_s00092p00120100amborella_trichopodaERM9922760.786843.9086phaseolus_vulgarisESW3097550.634336.5751
AMTR_s00092p00120100amborella_trichopodaERM9922760.53343.2741pisum_sativumPsat7g093560.1.cds48.279434.5142
AMTR_s00092p00120100amborella_trichopodaERM9922759.644743.2741vigna_angularisKOM2590349.682936.0465
AMTR_s00092p00120100amborella_trichopodaERM9922759.26442.8934vigna_unguiculataVigun03g144100.4.v1.249.41835.7672
AMTR_s00092p00120100amborella_trichopodaERM9922765.101546.1929manihot_esculentaOAY4729754.171138.4372
AMTR_s00092p00120100amborella_trichopodaERM9922748.223431.9797solanum_lycopersicumSolyc02g070035.1.150.599233.5553
AMTR_s00092p00120100amborella_trichopodaERM9922712.43659.77157solanum_lycopersicumSolyc02g070030.3.1.172.058856.6176
AMTR_s00092p00120100amborella_trichopodaERM9922760.659942.2589capsicum_annuumPHT8991150.905235.4633
AMTR_s00092p00120100amborella_trichopodaERM9922759.644743.6548vigna_radiataVradi0048s00660.152.572738.4787
AMTR_s00092p00120100amborella_trichopodaERM9922756.852840.8629lactuca_sativacds-PLY88664.155.860340.1496
AMTR_s00092p00120100amborella_trichopodaERM9922757.233540.4822helianthus_annuusmRNA:HanXRQr2_Chr04g018103151.2536.25
AMTR_s00092p00120100amborella_trichopodaERM9922760.025443.9086avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0001330.250.212336.7304
AMTR_s00092p00120100amborella_trichopodaERM9922760.152344.0355avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0003179.250.318536.8365
AMTR_s00092p00120100amborella_trichopodaERM9922760.406144.0355avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000640.145.813333.3975
AMTR_s00092p00120100amborella_trichopodaERM9922760.53344.2893lolium_perennecds.KYUSt_chr2.2819850.636937.0488
AMTR_s00092p00120100amborella_trichopodaERM9922760.025443.9086avena_sativa_sangAVESA.00010b.r2.2CG0289440.1.CDS50.212336.7304
AMTR_s00092p00120100amborella_trichopodaERM9922760.406144.0355avena_sativa_sangAVESA.00010b.r2.2AG0210980.1.CDS50.530836.8365
AMTR_s00092p00120100amborella_trichopodaERM9922760.152344.0355avena_sativa_sangAVESA.00010b.r2.2DG0339780.1.CDS50.318536.8365
AMTR_s00092p00120100amborella_trichopodaERM9922759.898543.5279oryza_rufipogonORUFI07G03760.249.736636.1433
AMTR_s00092p00120100amborella_trichopodaERM9922759.26443.2741oryza_brachyanthaOB07G13060.149.054635.8193
AMTR_s00092p00120100amborella_trichopodaERM9922759.390943.1472oryza_glaberrimaORGLA07G0034600.150.5436.7171
AMTR_s00092p00120100amborella_trichopodaERM9922760.659943.5279setaria_italicaKQL2254251.342636.8421
AMTR_s00092p00120100amborella_trichopodaERM9922760.406143.2741setaria_viridisTKW3056451.127836.6273
AMTR_s00092p00120100amborella_trichopodaERM9922760.025443.2741sorghum_bicolorEER9802550.212336.1996
AMTR_s00092p00120100amborella_trichopodaERM9922760.659945.1777triticum_turgidumTRITD2Av1G132060.448.185535.8871
AMTR_s00092p00120100amborella_trichopodaERM9922760.53345.1777triticum_turgidumTRITD2Bv1G118520.350.529737.7119
AMTR_s00092p00120100amborella_trichopodaERM9922760.786845.1777secale_cerealeSECCE2Rv1G0103010.150.849337.7919
AMTR_s00092p00120100amborella_trichopodaERM9922760.53344.797triticum_aestivumTraesCS2D02G114600.150.907237.6734
AMTR_s00092p00120100amborella_trichopodaERM9922760.659945.1777triticum_aestivumTraesCS2A02G246700.150.743137.7919
AMTR_s00092p00120100amborella_trichopodaERM9922760.53345.1777triticum_aestivumTraesCS2B02G263600.150.529737.7119
AMTR_s00092p00120100amborella_trichopodaERM9922760.406144.9239triticum_aestivumTraesCS2D02G249000.150.530837.5796
AMTR_s00092p00120100amborella_trichopodaERM9922720.812213.198zea_maysZm00001eb318270_P00152.564133.3333
AMTR_s00092p00120100amborella_trichopodaERM9922759.898542.8934zea_maysZm00001eb300700_P00150.698236.305
AMTR_s00092p00120100amborella_trichopodaERM9922746.573631.599zea_maysZm00001eb161380_P00143.278329.3632
AMTR_s00092p00120100amborella_trichopodaERM9922712.81737.36041zea_maysZm00001eb357190_P00146.976726.9767
AMTR_s00092p00120100amborella_trichopodaERM9922764.340147.8426ananas_comosusAco008418.1.mrna154.692640.6688
AMTR_s00092p00120100amborella_trichopodaERM9922732.233523.731ananas_comosusAco024754.1.mrna159.905744.1038
AMTR_s00092p00120100amborella_trichopodaERM9922732.360423.731ananas_comosusAco025526.1.mrna158.755843.0876
AMTR_s00092p00120100amborella_trichopodaERM9922714.08636.34518caenorhabditis_elegansC02F5.6b.125.113111.3122
AMTR_s00092p00120100amborella_trichopodaERM9922713.95946.21827drosophila_melanogasterFBpp008709228.13312.532
AMTR_s00092p00120100amborella_trichopodaERM9922711.54826.09137homo_sapiensENSP0000049901723.155212.2137
AMTR_s00092p00120100amborella_trichopodaERM9922737.690423.6041chenopodium_quinoaAUR62034030-RA:cds44.461127.8443
AMTR_s00092p00120100amborella_trichopodaERM9922738.19823.9848chenopodium_quinoaAUR62043099-RA:cds45.954228.855
AMTR_s00092p00120100amborella_trichopodaERM9922747.081227.7919chara_brauniiGBG6230018.643211.005
AMTR_s00092p00120100amborella_trichopodaERM9922714.720810.4061arabis_alpinaKFK2868653.456237.788
AMTR_s00092p00120100amborella_trichopodaERM9922718.654811.802arabis_alpinaKFK2868854.646834.5725
AMTR_s00092p00120100amborella_trichopodaERM9922727.918821.1929corylus_avellanaCav04g04460.t151.522239.1101
AMTR_s00092p00120100amborella_trichopodaERM9922742.13230.203corylus_avellanaCav04g04480.t143.005230.829
AMTR_s00092p00120100amborella_trichopodaERM9922762.944247.335corylus_avellanaCav04g04510.t151.612938.8137
AMTR_s00092p00120100amborella_trichopodaERM9922759.390943.7817brachypodium_distachyonKQK2078649.576336.5466
AMTR_s00092p00120100amborella_trichopodaERM9922759.771643.401oryza_glumipatulaOGLUM07G03470.249.631236.0379
AMTR_s00092p00120100amborella_trichopodaERM9922755.710740.9898oryza_meridionalisOMERI07G02600.548.723635.8491
AMTR_s00092p00120100amborella_trichopodaERM9922759.644744.1624ipomoea_trilobaitb08g06850.t150.483437.3792
AMTR_s00092p00120100amborella_trichopodaERM9922757.86840.6091kalanchoe_fedtschenkoiKaladp0008s0829.1.v1.147.899233.6134
AMTR_s00092p00120100amborella_trichopodaERM9922732.994925.1269triticum_urartuTuG1812G0200001173.01.T0160.747746.2617
AMTR_s00092p00120100amborella_trichopodaERM9922761.928945.9391eucalyptus_grandisKCW4822158.795243.6145
AMTR_s00092p00120100amborella_trichopodaERM9922749.111734.7716eucalyptus_grandisKCW4542353.899738.1616
AMTR_s00092p00120100amborella_trichopodaERM9922757.994943.1472cynara_cardunculusKVH8936250.890937.8619
AMTR_s00092p00120100amborella_trichopodaERM9922761.167543.2741trifolium_pratenseTp57577_TGAC_v2_mRNA3140751.005336.0847
AMTR_s00092p00120100amborella_trichopodaERM9922761.928943.2741gossypium_raimondiiKJB6657350.257535.1184
AMTR_s00092p00120100amborella_trichopodaERM9922752.030537.1827arabidopsis_lyrataAl_scaffold_0007_208648.009434.3091
AMTR_s00092p00120100amborella_trichopodaERM9922756.472138.198arabidopsis_lyratafgenesh2_kg.7__2228__AT4G20910.147.189831.9194
AMTR_s00092p00120100amborella_trichopodaERM9922761.294445.0508hordeum_vulgareHORVU.MOREX.r3.2HG0151810.151.111137.5661
AMTR_s00092p00120100amborella_trichopodaERM9922759.137142.8934oryza_barthiiOBART07G04060.249.104335.6164
AMTR_s00092p00120100amborella_trichopodaERM9922764.847748.2234musa_acuminataMa01_p19150.250.845837.8109
AMTR_s00092p00120100amborella_trichopodaERM9922752.791937.5635arabidopsis_hallerig05217.t145.664132.4918
AMTR_s00092p00120100amborella_trichopodaERM9922756.59941.8782eragrostis_tefEt_5B_044245.CDS56.030241.4573
AMTR_s00092p00120100amborella_trichopodaERM9922756.472140.9898eragrostis_tefEt_5A_041602.CDS52.850438.361
AMTR_s00092p00120100amborella_trichopodaERM9922761.928946.066corymbia_citriodoracds-KAF8028800.151.368438.2105
AMTR_s00092p00120100amborella_trichopodaERM9922762.563545.3046rosa_chinensisPRQ2968450.254836.3914
AMTR_s00092p00120100amborella_trichopodaERM9922759.644743.6548juglans_regiacds.Jr03_17100_p151.08737.3913
AMTR_s00092p00120100amborella_trichopodaERM9922763.578746.7005juglans_regiacds.Jr03_17110_p153.92939.6125
AMTR_s00092p00120100amborella_trichopodaERM9922763.578746.7005juglans_regiacds.Jr03_17090_p152.241938.3733
AMTR_s00092p00120100amborella_trichopodaERM9922725.761416.8782saccharum_spontaneumSspon.02G0026620-1A-mRNA-1:cds42.3827.7662
AMTR_s00092p00120100amborella_trichopodaERM9922732.487324.7462triticum_dicoccoidesTRIDC2AG013780.360.663546.2085
AMTR_s00092p00120100amborella_trichopodaERM9922760.786845.3046triticum_dicoccoidesTRIDC2BG038980.250.741537.8178
AMTR_s00092p00120100amborella_trichopodaERM9922760.406145.0508triticum_dicoccoidesTRIDC2AG034000.152.021938.7978
AMTR_s00092p00120100amborella_trichopodaERM9922737.690424.6193brassica_oleraceaBo1g022600.144.328428.9552
AMTR_s00092p00120100amborella_trichopodaERM9922755.20339.2132brassica_oleraceaBo1g022590.146.774233.2258
AMTR_s00092p00120100amborella_trichopodaERM9922753.680237.4365brassica_oleraceaBo1g022610.145.289131.5846
AMTR_s00092p00120100amborella_trichopodaERM9922759.517843.401oryza_indicaBGIOSGA024768-PA5036.4606
AMTR_s00092p00120100amborella_trichopodaERM9922718.02037.48731ciona_savignyiENSCSAVP0000001013826.94511.1954
AMTR_s00092p00120100amborella_trichopodaERM9922724.619318.7817dioscorea_rotundataDRNTG_11989.150.259138.342
AMTR_s00092p00120100amborella_trichopodaERM9922761.040646.1929dioscorea_rotundataDRNTG_14930.153.984340.853
AMTR_s00092p00120100amborella_trichopodaERM9922737.182726.5228olea_europaeaOE9A052825C152.983737.7938
AMTR_s00092p00120100amborella_trichopodaERM9922760.53342.5127olea_europaeaOE9A100759C350.852935.7143
AMTR_s00092p00120100amborella_trichopodaERM9922763.832546.1929actinidia_chinensisPSR9872752.670238.1152
AMTR_s00092p00120100amborella_trichopodaERM9922762.182745.1777prunus_aviumPav_sc0000637.1_g070.1.mk:mrna52.01737.7919
AMTR_s00092p00120100amborella_trichopodaERM9922734.010223.731quercus_subercds-POF21632.146.853132.6923
AMTR_s00092p00120100amborella_trichopodaERM992272518.9086quercus_subercds-POF21633.135.883427.1403
AMTR_s00092p00120100amborella_trichopodaERM9922762.690444.0355nicotiana_attenuataOIT0613652.109736.6034
AMTR_s00092p00120100amborella_trichopodaERM9922761.294445.0508citrus_clementinaESR6211951.492537.8465
AMTR_s00092p00120100amborella_trichopodaERM9922753.680237.6904brassica_rapa_ro18A01p013110.1_BraROA.145.192331.7308
AMTR_s00092p00120100amborella_trichopodaERM9922755.456938.4518brassica_rapa_ro18A01p013090.1_BraROA.127.46719.0446
AMTR_s00092p00120100amborella_trichopodaERM9922759.644742.7665daucus_carotaKZN1119149.060535.1775
AMTR_s00092p00120100amborella_trichopodaERM9922760.913746.7005nymphaea_colorataNC11G0117600.1:cds55.944142.8904
AMTR_s00092p00120100amborella_trichopodaERM9922761.294442.132coffea_canephoraCDP1729050.842134.9474
AMTR_s00092p00120100amborella_trichopodaERM9922747.842634.264aegilops_tauschiiAET2Gv20225800.350.468536.1446
AMTR_s00092p00120100amborella_trichopodaERM9922760.406144.9239aegilops_tauschiiAET2Gv20555400.750.423737.5
AMTR_s00092p00120100amborella_trichopodaERM9922762.436545.0508pistacia_veracds-EVM0018734.151.680737.2899
AMTR_s00092p00120100amborella_trichopodaERM9922721.827417.132digitaria_exilisDexi2A01G0003650.1:cds57.912545.4545
AMTR_s00092p00120100amborella_trichopodaERM9922719.670116.3706digitaria_exilisDexi2B01G0003520.1:cds37.621431.3107
AMTR_s00092p00120100amborella_trichopodaERM9922759.517843.6548oryza_sativaOs07t0164000-0150.647937.149
AMTR_s00092p00120100amborella_trichopodaERM9922760.659943.2741panicum_halliiPUZ6850051.287636.588
AMTR_s00092p00120100amborella_trichopodaERM9922765.482247.8426quercus_lobataQL05p062735:mrna54.201739.6008
AMTR_s00092p00120100amborella_trichopodaERM9922756.091441.1168eragrostis_curvulaTVU4150451.817137.9836
AMTR_s00092p00120100amborella_trichopodaERM9922717.385812.3096camelina_sativaCsa11g044890.148.070234.0351
AMTR_s00092p00120100amborella_trichopodaERM9922719.543115.3553camelina_sativaCsa11g025060.155.797143.8406
AMTR_s00092p00120100amborella_trichopodaERM9922757.106639.2132camelina_sativaCsa10g022600.140.10727.5401
AMTR_s00092p00120100amborella_trichopodaERM9922733.121821.1929camelina_sativaCsa11g025590.141.428626.5079
AMTR_s00092p00120100amborella_trichopodaERM9922755.329938.0711camelina_sativaCsa11g025600.145.606731.3808
AMTR_s00092p00120100amborella_trichopodaERM9922748.477233.5025camelina_sativaCsa10g022580.144.315530.6264
AMTR_s00092p00120100amborella_trichopodaERM9922755.837640.3553camelina_sativaCsa12g038620.141.587930.0567
AMTR_s00092p00120100amborella_trichopodaERM9922742.766528.8071selaginella_moellendorffiiEFJ1434041.604928.0247
AMTR_s00092p00120100amborella_trichopodaERM9922742.639628.5533selaginella_moellendorffiiEFJ2022942.105328.1955
AMTR_s00092p00120100amborella_trichopodaERM9922762.690446.7005vitis_viniferaVitvi10g00954_P0015238.7368
AMTR_s00092p00120100amborella_trichopodaERM9922756.091439.0863eutrema_salsugineumESQ5529345.993832.0499
AMTR_s00092p00120100amborella_trichopodaERM9922752.411237.9442eutrema_salsugineumESQ5529245.235532.7492
AMTR_s00092p00120100amborella_trichopodaERM9922760.659943.1472echinochloa_crusgalliscaffold409.40.cds51.787636.8364
AMTR_s00092p00120100amborella_trichopodaERM9922760.406142.8934echinochloa_crusgalliscaffold66.149.cds51.57136.6197
AMTR_s00092p00120100amborella_trichopodaERM9922760.786843.6548echinochloa_crusgalliscaffold28.602.cds52.235537.5136
AMTR_s00092p00120100amborella_trichopodaERM9922761.675144.1624corchorus_capsularisOMO8323950.836836.4017
AMTR_s00092p00120100amborella_trichopodaERM9922760.913743.2741fraxinus_excelsiorFRAEX38873_v2_000227660.2.cds51.502136.588
AMTR_s00092p00120100amborella_trichopodaERM9922758.502541.8782fraxinus_excelsiorFRAEX38873_v2_000309730.1.cds51.508436.8715
AMTR_s00092p00120100amborella_trichopodaERM9922760.279242.6396citrullus_lanatusCla97C03G059520.150.424635.6688
AMTR_s00092p00120100amborella_trichopodaERM9922759.26443.2741oryza_nivaraONIVA07G02640.249.261635.9705

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression