Description

Ensembl ID AMTR_s00079p00177100 Gene ID Accession -
Symbol Alias - Full Name Metallo-hydrolase/oxidoreductase superfamily protein
Status Confidence Length 56089 bases Strand Plus strand
Position AmTr_v1.0_scaffold00079 : 2931172 - 2987260 RNA binding domain Lactamase_B
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN04030 Lactamase_B PF00753 3.9e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN04030 1458 485aa ERN04030

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00079p00177100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00079p00177100amborella_trichopodaERN0403071.546455.8763papaver_somniferumRZC6141262.976449.1833
AMTR_s00079p00177100amborella_trichopodaERN0403070.309355.4639papaver_somniferumRZC5808368.063953.6926
AMTR_s00079p00177100amborella_trichopodaERN0403056.082539.7938marchantia_polymorphaPTQ3998550.277335.6747
AMTR_s00079p00177100amborella_trichopodaERN0403067.422750.1031ficus_caricaFCD_00018810-RA:cds64.752548.1188
AMTR_s00079p00177100amborella_trichopodaERN0403044.123736.2887beta_vulgarisKMT0823973.539560.4811
AMTR_s00079p00177100amborella_trichopodaERN0403068.247453.6082theobroma_cacaoEOY0010063.899650.1931
AMTR_s00079p00177100amborella_trichopodaERN0403064.123748.866arabidopsis_thalianaAT1G25375.159.351145.229
AMTR_s00079p00177100amborella_trichopodaERN0403068.659854.433populus_trichocarpaPotri.010G122000.6.v4.168.801754.5455
AMTR_s00079p00177100amborella_trichopodaERN0403069.484554.433populus_trichocarpaPotri.010G122100.2.v4.164.807750.7692
AMTR_s00079p00177100amborella_trichopodaERN0403064.948549.0722brassica_junceacds.BjuB04g20570S60.229445.5067
AMTR_s00079p00177100amborella_trichopodaERN0403065.360849.4845brassica_junceacds.BjuA09g25860S60.844546.0653
AMTR_s00079p00177100amborella_trichopodaERN0403064.948549.6907brassica_napusCDY4211260.460746.2572
AMTR_s00079p00177100amborella_trichopodaERN0403065.773249.6907brassica_napusCDX8498461.228446.2572
AMTR_s00079p00177100amborella_trichopodaERN0403070.309353.1959prunus_persicaONI3146064.705948.9564
AMTR_s00079p00177100amborella_trichopodaERN0403068.453651.3402cajanus_cajanC.cajan_07636.t65.225948.9194
AMTR_s00079p00177100amborella_trichopodaERN0403068.453652.1649malus_domestica_goldenmRNA:MD13G003410067.893751.7382
AMTR_s00079p00177100amborella_trichopodaERN0403067.010351.134malus_domestica_goldenmRNA:MD16G003530066.735150.924
AMTR_s00079p00177100amborella_trichopodaERN0403026.804121.4433glycine_maxKRH3592176.923161.5385
AMTR_s00079p00177100amborella_trichopodaERN0403070.515552.9897glycine_maxKRG9085864.895648.7666
AMTR_s00079p00177100amborella_trichopodaERN0403070.309353.1959prunus_dulcisVVA1800264.705948.9564
AMTR_s00079p00177100amborella_trichopodaERN0403069.484552.7835medicago_truncatulaAES6287964.435948.9484
AMTR_s00079p00177100amborella_trichopodaERN0403070.721655.8763lupinus_angustifoliusOIW1292270.576155.7613
AMTR_s00079p00177100amborella_trichopodaERN0403054.845437.5258physcomitrium_patensPp3c15_25940V3.345.941331.4335
AMTR_s00079p00177100amborella_trichopodaERN0403068.453651.9588phaseolus_vulgarisESW1493068.032851.6393
AMTR_s00079p00177100amborella_trichopodaERN0403069.484551.9588pisum_sativumPsat6g225720.2.cds64.559448.2759
AMTR_s00079p00177100amborella_trichopodaERN0403068.86652.1649vigna_angularisKOM3630468.442651.8443
AMTR_s00079p00177100amborella_trichopodaERN0403068.659851.134vigna_unguiculataVigun07g268200.3.v1.263.549647.3282
AMTR_s00079p00177100amborella_trichopodaERN0403068.659851.7526manihot_esculentaOAY3135063.549647.9008
AMTR_s00079p00177100amborella_trichopodaERN0403068.041252.1649solanum_lycopersicumSolyc05g009140.3.167.901252.0576
AMTR_s00079p00177100amborella_trichopodaERN0403067.216551.7526capsicum_annuumPHT6732761.859647.6281
AMTR_s00079p00177100amborella_trichopodaERN0403065.360848.6598vigna_radiataVradi08g21150.158.921943.8662
AMTR_s00079p00177100amborella_trichopodaERN0403067.422751.5464lactuca_sativacds-PLY91219.162.643747.8927
AMTR_s00079p00177100amborella_trichopodaERN0403066.185652.9897helianthus_annuusmRNA:HanXRQr2_Chr17g080392161.376749.1396
AMTR_s00079p00177100amborella_trichopodaERN0403066.185649.4845avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0000116.558.152243.4783
AMTR_s00079p00177100amborella_trichopodaERN0403066.597948.6598avena_sativa_ot3098cds.AVESA.00001b.r3.1Cg0000455.153.037838.7521
AMTR_s00079p00177100amborella_trichopodaERN0403066.185648.866avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0000168.154.131539.9663
AMTR_s00079p00177100amborella_trichopodaERN0403064.948547.4227lolium_perennecds.KYUSt_chr3.477067.021348.9362
AMTR_s00079p00177100amborella_trichopodaERN0403052.371140.4124oryza_longistaminataKN538959.1_FGP02259.484845.9016
AMTR_s00079p00177100amborella_trichopodaERN0403066.597949.4845avena_sativa_sangAVESA.00010b.r2.3CG0454680.2.CDS60.714345.1128
AMTR_s00079p00177100amborella_trichopodaERN0403065.979449.2784avena_sativa_sangAVESA.00010b.r2.1CG0110030.1.CDS65.439748.8753
AMTR_s00079p00177100amborella_trichopodaERN0403065.979448.866avena_sativa_sangAVESA.00010b.r2.3AG0407120.2.CDS60.150444.5489
AMTR_s00079p00177100amborella_trichopodaERN0403045.773234.2268solanum_tuberosumPGSC0003DMT40003772562.535246.7606
AMTR_s00079p00177100amborella_trichopodaERN0403066.804150.5155oryza_rufipogonORUFI01G02290.161.59746.5779
AMTR_s00079p00177100amborella_trichopodaERN0403067.835151.3402oryza_brachyanthaOB01G12090.162.666747.4286
AMTR_s00079p00177100amborella_trichopodaERN0403066.804150.5155oryza_glaberrimaORGLA01G0018700.161.59746.5779
AMTR_s00079p00177100amborella_trichopodaERN0403067.628950.9278oryza_punctataOPUNC01G01900.360.073345.2381
AMTR_s00079p00177100amborella_trichopodaERN0403045.56732.3711setaria_italicaKQL0426662.253544.2254
AMTR_s00079p00177100amborella_trichopodaERN0403019.381415.4639setaria_italicaKQL0426861.437949.0196
AMTR_s00079p00177100amborella_trichopodaERN0403067.010350.1031setaria_viridisTKW1327962.3846.6411
AMTR_s00079p00177100amborella_trichopodaERN0403066.185648.0412sorghum_bicolorKXG3195762.08945.0677
AMTR_s00079p00177100amborella_trichopodaERN0403064.536148.4536triticum_turgidumTRITD3Av1G008450.259.392844.592
AMTR_s00079p00177100amborella_trichopodaERN0403065.773249.2784triticum_turgidumTRITD3Bv1G012250.351.701838.7358
AMTR_s00079p00177100amborella_trichopodaERN0403065.979448.4536secale_cerealeSECCE3Rv1G0148880.161.068744.8473
AMTR_s00079p00177100amborella_trichopodaERN0403066.185649.2784triticum_aestivumTraesCS3A02G036800.260.680545.1796
AMTR_s00079p00177100amborella_trichopodaERN0403065.773249.2784triticum_aestivumTraesCS3B02G047100.151.701838.7358
AMTR_s00079p00177100amborella_trichopodaERN0403066.391849.4845triticum_aestivumTraesCS3D02G043300.152.18838.8979
AMTR_s00079p00177100amborella_trichopodaERN0403066.597949.4845zea_maysZm00001eb125200_P00161.877445.977
AMTR_s00079p00177100amborella_trichopodaERN0403069.896954.6392ananas_comosusAco022988.1.mrna163.841849.9058
AMTR_s00079p00177100amborella_trichopodaERN0403024.329911.5464caenorhabditis_elegansY53F4B.39b.135.866317.0213
AMTR_s00079p00177100amborella_trichopodaERN0403021.237111.5464drosophila_melanogasterFBpp007925835.27419.1781
AMTR_s00079p00177100amborella_trichopodaERN0403022.474211.9588homo_sapiensENSP0000027659037.847220.1389
AMTR_s00079p00177100amborella_trichopodaERN0403063.29949.2784chenopodium_quinoaAUR62002836-RA:cds58.36545.4373
AMTR_s00079p00177100amborella_trichopodaERN0403065.979450.9278chenopodium_quinoaAUR62037303-RA:cds66.666751.4583
AMTR_s00079p00177100amborella_trichopodaERN0403065.979449.6907chenopodium_quinoaAUR62002838-RA:cds66.666750.2083
AMTR_s00079p00177100amborella_trichopodaERN0403067.216552.3711chenopodium_quinoaAUR62037301-RA:cds48.36837.6855
AMTR_s00079p00177100amborella_trichopodaERN0403037.73225.9794chara_brauniiGBG5876246.329131.8987
AMTR_s00079p00177100amborella_trichopodaERN0403064.742347.6289arabis_alpinaKFK4453960.268744.3378
AMTR_s00079p00177100amborella_trichopodaERN0403066.185649.8969brachypodium_distachyonKQK0255466.459650.1035
AMTR_s00079p00177100amborella_trichopodaERN0403061.855747.0103oryza_glumipatulaOGLUM01G02350.160.975646.3415
AMTR_s00079p00177100amborella_trichopodaERN0403066.597951.7526ipomoea_trilobaitb07g07720.t259.704346.3956
AMTR_s00079p00177100amborella_trichopodaERN0403065.773251.3402kalanchoe_fedtschenkoiKaladp0039s0509.1.v1.163.168349.3069
AMTR_s00079p00177100amborella_trichopodaERN0403065.979449.4845triticum_urartuTuG1812G0300000408.01.T0160.491545.3686
AMTR_s00079p00177100amborella_trichopodaERN0403066.804151.9588eucalyptus_grandisKCW8630366.122551.4286
AMTR_s00079p00177100amborella_trichopodaERN0403064.329950.9278cynara_cardunculusKVH9627261.782248.9109
AMTR_s00079p00177100amborella_trichopodaERN0403068.86654.0206trifolium_pratenseTp57577_TGAC_v2_mRNA502561.737548.4288
AMTR_s00079p00177100amborella_trichopodaERN0403066.804152.3711gossypium_raimondiiKJB3144261.016947.8343
AMTR_s00079p00177100amborella_trichopodaERN0403066.391849.8969hordeum_vulgareHORVU.MOREX.r3.3HG0225790.251.192438.4738
AMTR_s00079p00177100amborella_trichopodaERN0403061.855747.0103oryza_barthiiOBART01G02210.260.975646.3415
AMTR_s00079p00177100amborella_trichopodaERN0403066.597949.4845asparagus_officinalisONK6638955.025640.8859
AMTR_s00079p00177100amborella_trichopodaERN0403059.175344.5361asparagus_officinalisONK6639062.527247.0588
AMTR_s00079p00177100amborella_trichopodaERN0403070.309352.5773musa_acuminataMa07_p11710.166.085349.4186
AMTR_s00079p00177100amborella_trichopodaERN0403063.917548.866arabidopsis_hallerig08159.t159.160345.229
AMTR_s00079p00177100amborella_trichopodaERN0403067.628950.1031eragrostis_tefEt_3B_030606.CDS60.853445.0835
AMTR_s00079p00177100amborella_trichopodaERN0403063.505246.1856eragrostis_tefEt_3A_026226.CDS62.857145.7143
AMTR_s00079p00177100amborella_trichopodaERN0403068.041253.8144corymbia_citriodoracds-KAF8040267.162.146949.1525
AMTR_s00079p00177100amborella_trichopodaERN0403035.257727.4227rosa_chinensisPRQ2345679.166761.5741
AMTR_s00079p00177100amborella_trichopodaERN0403040.412430.9278rosa_chinensisPRQ2181673.408256.1798
AMTR_s00079p00177100amborella_trichopodaERN0403069.484552.3711rosa_chinensisPRQ4032269.341652.2634
AMTR_s00079p00177100amborella_trichopodaERN0403040.412430.9278rosa_chinensisPRQ3212973.408256.1798
AMTR_s00079p00177100amborella_trichopodaERN0403068.86652.9897juglans_regiacds.Jr13_28140_p168.442652.6639
AMTR_s00079p00177100amborella_trichopodaERN0403069.278453.1959juglans_regiacds.Jr13_28150_p164.122149.2366
AMTR_s00079p00177100amborella_trichopodaERN0403058.969143.9175triticum_dicoccoidesTRIDC3AG004010.363.134747.0199
AMTR_s00079p00177100amborella_trichopodaERN0403059.175344.1237triticum_dicoccoidesTRIDC3BG006300.363.355447.2406
AMTR_s00079p00177100amborella_trichopodaERN0403065.773249.6907brassica_oleraceaBo5g043360.161.228446.2572
AMTR_s00079p00177100amborella_trichopodaERN0403066.804150.5155oryza_indicaBGIOSGA002714-PA61.480146.4896
AMTR_s00079p00177100amborella_trichopodaERN0403016.49488.86598ciona_savignyiENSCSAVP0000000748934.63218.6147
AMTR_s00079p00177100amborella_trichopodaERN0403069.690751.5464dioscorea_rotundataDRNTG_33818.26548.0769
AMTR_s00079p00177100amborella_trichopodaERN0403022.680419.1753olea_europaeaOE9A106735C265.868355.6886
AMTR_s00079p00177100amborella_trichopodaERN0403064.948550.1031olea_europaeaOE9A091801C164.154849.4908
AMTR_s00079p00177100amborella_trichopodaERN0403059.175345.3608olea_europaeaOE9A063892C164.205849.217
AMTR_s00079p00177100amborella_trichopodaERN0403069.690754.2268actinidia_chinensisPSR9114365.503950.969
AMTR_s00079p00177100amborella_trichopodaERN0403070.103153.6082prunus_aviumPav_sc0001051.1_g340.1.mk:mrna64.516149.3359
AMTR_s00079p00177100amborella_trichopodaERN0403070.927853.8144quercus_subercds-POE69200.159.826145.3913
AMTR_s00079p00177100amborella_trichopodaERN0403067.010353.4021nicotiana_attenuataOIS9575066.598453.0738
AMTR_s00079p00177100amborella_trichopodaERN0403070.721654.2268citrus_clementinaESR6167265.708850.3831
AMTR_s00079p00177100amborella_trichopodaERN0403064.948549.0722brassica_rapa_ro18A09p050700.1_BraROA.160.460745.6814
AMTR_s00079p00177100amborella_trichopodaERN0403067.216551.134daucus_carotaKZN0641861.977247.1483
AMTR_s00079p00177100amborella_trichopodaERN0403072.164955.8763nymphaea_colorataNC11G0244680.1:cds62.949648.741
AMTR_s00079p00177100amborella_trichopodaERN0403019.793811.3402ostreococcus_lucimarinusABO9486933.684219.2982
AMTR_s00079p00177100amborella_trichopodaERN0403067.216551.7526coffea_canephoraCDP0065161.163247.0919
AMTR_s00079p00177100amborella_trichopodaERN0403066.185649.6907aegilops_tauschiiAET3Gv20084600.249.922237.4806
AMTR_s00079p00177100amborella_trichopodaERN0403069.278454.0206pistacia_veracds-EVM0028559.163.516149.5274
AMTR_s00079p00177100amborella_trichopodaERN0403064.742349.2784digitaria_exilisDexi5A01G0007770.1:cds63.951148.6762
AMTR_s00079p00177100amborella_trichopodaERN0403066.804150.5155oryza_sativaOs01t0133500-0161.59746.5779
AMTR_s00079p00177100amborella_trichopodaERN0403067.010348.4536panicum_halliiPUZ5790552.58938.0259
AMTR_s00079p00177100amborella_trichopodaERN0403032.989723.9175quercus_lobataQL01p040421:mrna49.079835.5828
AMTR_s00079p00177100amborella_trichopodaERN0403042.680433.4021camelina_sativaCsa14g034060.157.821245.2514
AMTR_s00079p00177100amborella_trichopodaERN0403064.329949.0722camelina_sativaCsa17g035140.159.20345.1613
AMTR_s00079p00177100amborella_trichopodaERN0403039.381428.0412selaginella_moellendorffiiEFJ1987164.09445.6376
AMTR_s00079p00177100amborella_trichopodaERN0403040.412428.6598selaginella_moellendorffiiEFJ0739657.142940.5248
AMTR_s00079p00177100amborella_trichopodaERN0403071.340254.6392vitis_viniferaVitvi01g00314_P00265.406450.0945
AMTR_s00079p00177100amborella_trichopodaERN0403065.773249.6907eutrema_salsugineumESQ3421861.346246.3462
AMTR_s00079p00177100amborella_trichopodaERN0403067.835150.1031echinochloa_crusgalliscaffold88.70.cds63.147846.6411
AMTR_s00079p00177100amborella_trichopodaERN0403067.628949.6907echinochloa_crusgalliscaffold185.185.cds62.955946.2572
AMTR_s00079p00177100amborella_trichopodaERN0403066.597948.2474echinochloa_crusgalliscaffold59.315.cds63.333345.8824
AMTR_s00079p00177100amborella_trichopodaERN0403064.948549.2784fraxinus_excelsiorFRAEX38873_v2_000127130.2.cds59.099444.8405
AMTR_s00079p00177100amborella_trichopodaERN0403061.649546.8041oryza_nivaraONIVA01G02360.258.858344.685

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression