Description

Ensembl ID AMTR_s00077p00150130 Gene ID Accession -
Symbol Alias - Full Name Metallo-hydrolase/oxidoreductase superfamily protein
Status Confidence Length 4028 bases Strand Minus strand
Position AmTr_v1.0_scaffold00077 : 2226085 - 2230112 RNA binding domain Lactamase_B
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN04245 Lactamase_B PF00753 2e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN04245 777 258aa ERN04245

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00077p00150130amborella_trichopodaERN0919436.824321.6216amborella_trichopodaERN0424542.248124.8062
AMTR_s00077p00150130amborella_trichopodaERN0949421.621611.4114amborella_trichopodaERN0424527.90714.7287
AMTR_s00077p00150130amborella_trichopodaERN2032049.679533.3333amborella_trichopodaERN0424560.077540.3101

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00077p00150130amborella_trichopodaERN0424556.201540.3101chondrus_crispusCDF3243248.013234.4371
AMTR_s00077p00150130amborella_trichopodaERN0424587.596970.9302papaver_somniferumRZC6291687.258770.6564
AMTR_s00077p00150130amborella_trichopodaERN0424588.372172.8682cannabis_sativa_femalecds.evm.model.02.3988.372172.8682
AMTR_s00077p00150130amborella_trichopodaERN0424588.759773.2558ficus_caricaFCD_00009902-RA:cds88.759773.2558
AMTR_s00077p00150130amborella_trichopodaERN0424588.759776.7442beta_vulgarisKMT1740488.759776.7442
AMTR_s00077p00150130amborella_trichopodaERN0424587.209375.1938theobroma_cacaoEOY2021087.209375.1938
AMTR_s00077p00150130amborella_trichopodaERN0424533.720924.8062chlamydomonas_reinhardtiiPNW8215918.315813.4737
AMTR_s00077p00150130amborella_trichopodaERN0424586.434170.9302arabidopsis_thalianaAT3G10850.186.434170.9302
AMTR_s00077p00150130amborella_trichopodaERN0424589.534975.1938populus_trichocarpaPotri.019G062600.1.v4.189.534975.1938
AMTR_s00077p00150130amborella_trichopodaERN0424587.209371.7054cucumis_sativusKGN5075487.209371.7054
AMTR_s00077p00150130amborella_trichopodaERN0424586.821770.9302brassica_junceacds.BjuA05g33130S86.821770.9302
AMTR_s00077p00150130amborella_trichopodaERN0424587.209372.093brassica_napusCDY6541287.209372.093
AMTR_s00077p00150130amborella_trichopodaERN0424586.821770.9302brassica_napusCDY0857286.821770.9302
AMTR_s00077p00150130amborella_trichopodaERN0424588.759773.6434prunus_persicaONI2487188.759773.6434
AMTR_s00077p00150130amborella_trichopodaERN0424579.84563.1783cajanus_cajanC.cajan_23660.t78.62662.2137
AMTR_s00077p00150130amborella_trichopodaERN0424575.193862.0155cajanus_cajanC.cajan_05223.t88.181872.7273
AMTR_s00077p00150130amborella_trichopodaERN0424589.922573.2558malus_domestica_goldenmRNA:MD01G013870089.922573.2558
AMTR_s00077p00150130amborella_trichopodaERN0424577.519460.8527glycine_maxKRH5369777.519460.8527
AMTR_s00077p00150130amborella_trichopodaERN0424587.209371.7054glycine_maxKRH1694787.209371.7054
AMTR_s00077p00150130amborella_trichopodaERN0424565.891554.6512glycine_maxKRH6423385.427170.8543
AMTR_s00077p00150130amborella_trichopodaERN0424563.178352.3256glycine_maxKRH7255880.693166.8317
AMTR_s00077p00150130amborella_trichopodaERN0424588.372173.2558prunus_dulcisVVA1856988.372173.2558
AMTR_s00077p00150130amborella_trichopodaERN0424587.984575.1938medicago_truncatulaAES9842187.984575.1938
AMTR_s00077p00150130amborella_trichopodaERN0424587.209369.7674lupinus_angustifoliusOIV899059072
AMTR_s00077p00150130amborella_trichopodaERN0424575.581458.9147physcomitrium_patensPp3c8_15440V3.27558.4615
AMTR_s00077p00150130amborella_trichopodaERN0424557.364343.4109phaseolus_vulgarisESW0839676.288757.732
AMTR_s00077p00150130amborella_trichopodaERN0424587.596973.2558phaseolus_vulgarisESW1332987.596973.2558
AMTR_s00077p00150130amborella_trichopodaERN0424587.209374.8062pisum_sativumPsat2g062440.1.cds87.209374.8062
AMTR_s00077p00150130amborella_trichopodaERN0424584.496167.8295vigna_angularisKOM4101484.169967.5676
AMTR_s00077p00150130amborella_trichopodaERN0424588.372174.4186vigna_unguiculataVigun08g113700.1.v1.288.372174.4186
AMTR_s00077p00150130amborella_trichopodaERN0424585.271366.6667vigna_unguiculataVigun09g135000.1.v1.283.650265.3992
AMTR_s00077p00150130amborella_trichopodaERN0424585.658971.3178manihot_esculentaOAY4641185.658971.3178
AMTR_s00077p00150130amborella_trichopodaERN0424581.395363.9535solanum_lycopersicumSolyc06g048530.3.153.164641.7722
AMTR_s00077p00150130amborella_trichopodaERN0424587.984572.4806capsicum_annuumPHT7828487.644872.2008
AMTR_s00077p00150130amborella_trichopodaERN0424583.720965.8915vigna_radiataVradi05g05270.182.758665.1341
AMTR_s00077p00150130amborella_trichopodaERN0424587.984573.6434vigna_radiataVradi06g07490.187.984573.6434
AMTR_s00077p00150130amborella_trichopodaERN0424589.147375.1938sesamum_indicumSIN_1008826.t89.147375.1938
AMTR_s00077p00150130amborella_trichopodaERN0424590.310174.4186lactuca_sativacds-PLY66058.185.036570.073
AMTR_s00077p00150130amborella_trichopodaERN0424589.147372.8682helianthus_annuusmRNA:HanXRQr2_Chr14g066802186.466270.6767
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0000278.184.496169.7674
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0003080.184.496169.7674
AMTR_s00077p00150130amborella_trichopodaERN0424584.108569.3798avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0000680.184.108569.3798
AMTR_s00077p00150130amborella_trichopodaERN0424584.108570.155lolium_perennecds.KYUSt_chr4.2860684.435870.428
AMTR_s00077p00150130amborella_trichopodaERN0424583.333367.4419oryza_longistaminataKN539449.1_FGP01157.795746.7742
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674avena_sativa_sangAVESA.00010b.r2.4CG1318410.1.CDS81.954967.6692
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674avena_sativa_sangAVESA.00010b.r2.5DG1001120.1.CDS84.496169.7674
AMTR_s00077p00150130amborella_trichopodaERN0424584.108569.3798avena_sativa_sangAVESA.00010b.r2.5AG0806810.2.CDS84.108569.3798
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.8682solanum_tuberosumPGSC0003DMT40007096188.759772.8682
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.9302oryza_rufipogonORUFI03G16770.185.658970.9302
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.5426oryza_brachyanthaOB03G25940.185.658970.5426
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.9302oryza_glaberrimaORGLA03G0155000.186.046570.9302
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.9302oryza_glaberrimaORGLA07G0231000.186.046570.9302
AMTR_s00077p00150130amborella_trichopodaERN0424586.434170.9302oryza_punctataOPUNC03G15680.186.434170.9302
AMTR_s00077p00150130amborella_trichopodaERN0424585.658969.7674setaria_italicaKQK9102682.462767.1642
AMTR_s00077p00150130amborella_trichopodaERN0424585.658969.7674setaria_viridisTKV9628385.658969.7674
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.9302sorghum_bicolorEER9231686.046570.9302
AMTR_s00077p00150130amborella_trichopodaERN0424584.108569.7674triticum_turgidumTRITD4Bv1G107220.381.578967.6692
AMTR_s00077p00150130amborella_trichopodaERN0424584.496170.155triticum_turgidumTRITD4Av1G068920.181.954968.0451
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674secale_cerealeSECCE4Rv1G0242220.184.496169.7674
AMTR_s00077p00150130amborella_trichopodaERN0424585.271370.5426triticum_aestivumTraesCS4D02G173800.282.706868.4211
AMTR_s00077p00150130amborella_trichopodaERN0424584.108569.7674triticum_aestivumTraesCS4B02G171800.281.578967.6692
AMTR_s00077p00150130amborella_trichopodaERN0424584.496170.155triticum_aestivumTraesCS4A02G132900.281.954968.0451
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.155zea_maysZm00001eb015860_P00282.462767.5373
AMTR_s00077p00150130amborella_trichopodaERN0424587.596974.4186ananas_comosusAco011159.1.mrna187.596974.4186
AMTR_s00077p00150130amborella_trichopodaERN0424558.914740.6977caenorhabditis_elegansY17G7B.3.158.461540.3846
AMTR_s00077p00150130amborella_trichopodaERN0424569.379850drosophila_melanogasterFBpp007791251.436837.069
AMTR_s00077p00150130amborella_trichopodaERN0424555.038835.2713saccharomyces_cerevisiaeYDR272W51.824833.2117
AMTR_s00077p00150130amborella_trichopodaERN0424553.100832.5581saccharomyces_cerevisiaeYOR040W48.070229.4737
AMTR_s00077p00150130amborella_trichopodaERN0424590.310177.1318chenopodium_quinoaAUR62032547-RA:cds90.310177.1318
AMTR_s00077p00150130amborella_trichopodaERN0424590.310175.969chenopodium_quinoaAUR62031661-RA:cds90.310175.969
AMTR_s00077p00150130amborella_trichopodaERN0424586.821770.9302arabis_alpinaKFK3847486.821770.9302
AMTR_s00077p00150130amborella_trichopodaERN0424584.496170.5426brachypodium_distachyonKQK2183884.496170.5426
AMTR_s00077p00150130amborella_trichopodaERN0424585.271370.5426oryza_glumipatulaOGLUM03G16550.166.066154.6547
AMTR_s00077p00150130amborella_trichopodaERN0424583.333368.9922oryza_meridionalisOMERI03G14480.177.338164.0288
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.8682ipomoea_trilobaitb03g14540.t188.759772.8682
AMTR_s00077p00150130amborella_trichopodaERN0424558.527146.8992ipomoea_trilobaitb03g14550.t178.238362.6943
AMTR_s00077p00150130amborella_trichopodaERN0424589.534975.1938kalanchoe_fedtschenkoiKaladp0037s0218.1.v1.189.534975.1938
AMTR_s00077p00150130amborella_trichopodaERN0424563.953541.4729galdieria_sulphurariaEME2656048.961431.7507
AMTR_s00077p00150130amborella_trichopodaERN0424567.829554.6512galdieria_sulphurariaEME3051465.789553.0075
AMTR_s00077p00150130amborella_trichopodaERN0424584.496170.155triticum_urartuTuG1812G0400002055.01.T0281.954968.0451
AMTR_s00077p00150130amborella_trichopodaERN0424558.139542.2481cyanidioschyzon_merolaeCMT117CT42.492930.8782
AMTR_s00077p00150130amborella_trichopodaERN0424581.782967.8295cynara_cardunculusKVI1004277.573564.3382
AMTR_s00077p00150130amborella_trichopodaERN0424588.372174.4186trifolium_pratenseTp57577_TGAC_v2_mRNA3507178.620766.2069
AMTR_s00077p00150130amborella_trichopodaERN0424587.209375.969gossypium_raimondiiKJB7487187.209375.969
AMTR_s00077p00150130amborella_trichopodaERN0424586.821772.8682arabidopsis_lyratascaffold_301249.186.821772.8682
AMTR_s00077p00150130amborella_trichopodaERN0424584.496169.7674hordeum_vulgareHORVU.MOREX.r3.4HG0379100.481.954967.6692
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.9302oryza_barthiiOBART03G16220.180.434866.3043
AMTR_s00077p00150130amborella_trichopodaERN0424589.922575.5814asparagus_officinalisONK6797589.922575.5814
AMTR_s00077p00150130amborella_trichopodaERN0424586.434171.3178musa_acuminataMa09_p04800.186.770471.5953
AMTR_s00077p00150130amborella_trichopodaERN0424587.209373.2558arabidopsis_hallerig05961.t187.209373.2558
AMTR_s00077p00150130amborella_trichopodaERN0424586.434171.3178eragrostis_tefEt_4B_036706.CDS86.434171.3178
AMTR_s00077p00150130amborella_trichopodaERN0424586.046571.7054eragrostis_tefEt_4A_032530.CDS86.046571.7054
AMTR_s00077p00150130amborella_trichopodaERN0424584.496171.7054corymbia_citriodoracds-KAF8009810.184.496171.7054
AMTR_s00077p00150130amborella_trichopodaERN0424589.147372.8682rosa_chinensisPRQ5966789.147372.8682
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.4806juglans_regiacds.Jr07_39100_p188.759772.4806
AMTR_s00077p00150130amborella_trichopodaERN0424585.658971.3178saccharum_spontaneumSspon.01G0038060-1B-mRNA-1:cds85.658971.3178
AMTR_s00077p00150130amborella_trichopodaERN0424584.108569.7674triticum_dicoccoidesTRIDC4BG031220.170.454558.4416
AMTR_s00077p00150130amborella_trichopodaERN0424580.620266.6667triticum_dicoccoidesTRIDC4AG018480.673.239460.5634
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.9302oryza_indicaBGIOSGA010803-PA85.658970.9302
AMTR_s00077p00150130amborella_trichopodaERN0424587.209373.2558dioscorea_rotundataDRNTG_08753.187.209373.2558
AMTR_s00077p00150130amborella_trichopodaERN0424585.658968.9922leersia_perrieriLPERR03G14140.161.559949.5822
AMTR_s00077p00150130amborella_trichopodaERN0424587.209370.5426olea_europaeaOE9A082282C187.209370.5426
AMTR_s00077p00150130amborella_trichopodaERN0424587.596970.5426olea_europaeaOE9A068827C187.596970.5426
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.4806actinidia_chinensisPSS3247288.759772.4806
AMTR_s00077p00150130amborella_trichopodaERN0424591.085375.1938actinidia_chinensisPSS3440189.015273.4848
AMTR_s00077p00150130amborella_trichopodaERN0424589.534974.8062prunus_aviumPav_sc0001582.1_g130.1.mk:mrna61.764751.6043
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.4806quercus_subercds-POE60075.188.759772.4806
AMTR_s00077p00150130amborella_trichopodaERN0424589.147373.6434nicotiana_attenuataOIT0370689.147373.6434
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.4806citrus_clementinaESR4920777.627163.3898
AMTR_s00077p00150130amborella_trichopodaERN0424588.372172.8682daucus_carotaKZM9798088.372172.8682
AMTR_s00077p00150130amborella_trichopodaERN0424589.534975.5814nymphaea_colorataNC10G0065580.1:cds89.883375.8755
AMTR_s00077p00150130amborella_trichopodaERN0424554.651245.7364nymphaea_colorataNC10G0065570.1:cds65.581454.8837
AMTR_s00077p00150130amborella_trichopodaERN0424538.759725.1938ostreococcus_lucimarinusABO9508641.152326.749
AMTR_s00077p00150130amborella_trichopodaERN0424586.434170.5426coffea_canephoraCDP1387985.769270
AMTR_s00077p00150130amborella_trichopodaERN0424585.271370.5426aegilops_tauschiiAET4Gv20455800.167.901256.1728
AMTR_s00077p00150130amborella_trichopodaERN0424589.534973.6434pistacia_veracds-EVM0025924.189.189273.3591
AMTR_s00077p00150130amborella_trichopodaERN0424589.147373.6434pistacia_veracds-EVM0016543.188.803173.3591
AMTR_s00077p00150130amborella_trichopodaERN0424572.09358.5271digitaria_exilisDexi9B01G0035520.1:cds84.545568.6364
AMTR_s00077p00150130amborella_trichopodaERN0424571.705457.7519digitaria_exilisDexi9A01G0036820.1:cds84.090967.7273
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.9302oryza_sativaOs03t0332400-0185.658970.9302
AMTR_s00077p00150130amborella_trichopodaERN0424585.271370.5426panicum_halliiPUZ4123985.271370.5426
AMTR_s00077p00150130amborella_trichopodaERN0424588.759772.4806quercus_lobataQL08p065179:mrna88.759772.4806
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.5426eragrostis_curvulaTVT9866986.046570.5426
AMTR_s00077p00150130amborella_trichopodaERN0424586.434170.9302eragrostis_curvulaTVU4718486.434170.9302
AMTR_s00077p00150130amborella_trichopodaERN0424585.658971.3178camelina_sativaCsa19g014560.185.658971.3178
AMTR_s00077p00150130amborella_trichopodaERN0424587.209372.4806camelina_sativaCsa01g011800.187.209372.4806
AMTR_s00077p00150130amborella_trichopodaERN0424586.046571.3178camelina_sativaCsa15g014430.186.046571.3178
AMTR_s00077p00150130amborella_trichopodaERN0424576.744260.8527selaginella_moellendorffiiEFJ2508577.042861.0895
AMTR_s00077p00150130amborella_trichopodaERN0424588.372173.2558vitis_viniferaVitvi13g00010_P00188.372173.2558
AMTR_s00077p00150130amborella_trichopodaERN0424587.209371.7054eutrema_salsugineumESQ4895287.209371.7054
AMTR_s00077p00150130amborella_trichopodaERN0424585.271370.5426echinochloa_crusgalliscaffold22.470.cds85.271370.5426
AMTR_s00077p00150130amborella_trichopodaERN0424585.271369.7674echinochloa_crusgalliscaffold18.460.cds72.847759.6026
AMTR_s00077p00150130amborella_trichopodaERN0424586.046570.155echinochloa_crusgalliscaffold74.277.cds86.046570.155
AMTR_s00077p00150130amborella_trichopodaERN0424586.821774.4186corchorus_capsularisOMO6670986.821774.4186
AMTR_s00077p00150130amborella_trichopodaERN0424587.209370.9302fraxinus_excelsiorFRAEX38873_v2_000031270.1.cds87.209370.9302
AMTR_s00077p00150130amborella_trichopodaERN0424587.984573.2558citrullus_lanatusCla97C07G134270.187.984573.2558
AMTR_s00077p00150130amborella_trichopodaERN0424585.658970.9302oryza_nivaraONIVA03G17180.166.366454.955

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression