| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AMTR_s00065p00169990 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
hypothetical protein
|
| Status |
Confidence |
Length |
495 bases |
Strand |
Minus strand |
| Position |
AmTr_v1.0_scaffold00065 : 2731846 - 2732340 |
RNA binding domain |
Ribosomal_L12 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ERN18632 |
Ribosomal_L12 |
PF00542 |
1.3e-22 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ERN18632 |
495 |
164aa |
ERN18632 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AMTR_s00065p00169990 | amborella_trichopoda | ERM94362 | 44.186 | 28.3721 | amborella_trichopoda | ERN18632 | 57.9268 | 37.1951 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN10367 | 62.8319 | 43.3628 | amborella_trichopoda | ERN18632 | 43.2927 | 29.878 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN01246 | 41.9355 | 31.3364 | amborella_trichopoda | ERN18632 | 55.4878 | 41.4634 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN19832 | 44.4444 | 26.9006 | amborella_trichopoda | ERN18632 | 46.3415 | 28.0488 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN19573 | 46.6292 | 31.4607 | amborella_trichopoda | ERN18632 | 50.6098 | 34.1463 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERM97278 | 45.6853 | 32.9949 | amborella_trichopoda | ERN18632 | 54.878 | 39.6341 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 74.3902 | 59.1463 | papaver_somniferum | RZC72406 | 54.4643 | 43.3036 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 76.8293 | 61.5854 | papaver_somniferum | RZC80945 | 71.5909 | 57.3864 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 62.1951 | 46.3415 | marchantia_polymorpha | PTQ36259 | 44.5415 | 33.1878 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 78.0488 | 62.8049 | cannabis_sativa_female | cds.evm.model.04.1708 | 75.2941 | 60.5882 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 64.6341 | 51.2195 | ficus_carica | FCD_00006152-RA:cds | 62.7219 | 49.7041 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.6829 | 52.439 | beta_vulgaris | KMT20216 | 66.8675 | 51.8072 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 76.2195 | 61.5854 | cucumis_melo | MELO3C007639.2.1 | 74.4048 | 60.119 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.0732 | 51.2195 | arabidopsis_thaliana | AT4G37660.1 | 65.8683 | 50.2994 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 79.2683 | 66.4634 | populus_trichocarpa | Potri.004G224300.1.v4.1 | 74.2857 | 62.2857 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 77.439 | 62.8049 | cucumis_sativus | KGN48616 | 75.5952 | 61.3095 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.9024 | 53.6585 | brassica_napus | CDX72646 | 67.2619 | 52.381 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 79.2683 | 64.6341 | prunus_persica | ONI29370 | 60.4651 | 49.3023 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 49.3902 | 42.0732 | cajanus_cajan | C.cajan_11026.t.cds1 | 77.8846 | 66.3462 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 50 | 42.0732 | malus_domestica_golden | CDS:MD05G0032900.1 | 80.3922 | 67.6471 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 80.4878 | 64.0244 | malus_domestica_golden | mRNA:MD10G0037000 | 63.4615 | 50.4808 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.0732 | 51.8293 | glycine_max | KRG89872 | 69.1824 | 53.4591 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 65.2439 | 51.2195 | glycine_max | KRH18699 | 66.4596 | 52.1739 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 65.2439 | 51.2195 | medicago_truncatula | KEH37118 | 69.0323 | 54.1936 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 69.5122 | 51.8293 | lupinus_angustifolius | OIV95966 | 69.9387 | 52.1472 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.1219 | 53.0488 | phaseolus_vulgaris | ESW18204 | 73.2484 | 55.414 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.2927 | 53.0488 | phaseolus_vulgaris | ESW31844 | 71.3376 | 55.414 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.2927 | 53.0488 | pisum_sativum | Psat1g164400.1.cds1 | 71.7949 | 55.7692 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 49.3902 | 41.4634 | vigna_angularis | KOM52567 | 77.8846 | 65.3846 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.2927 | 51.8293 | vigna_unguiculata | Vigun03g062500.1.v1.2.CDS.1 | 71.3376 | 54.1401 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.0732 | 50.6098 | vigna_unguiculata | Vigun06g025800.2.v1.2 | 62.8571 | 47.4286 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 77.439 | 64.6341 | manihot_esculenta | OAY33616 | 72.9885 | 60.9195 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75 | 51.8293 | solanum_lycopersicum | Solyc02g092300.1.1.1 | 74.0964 | 51.2048 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 74.3902 | 51.2195 | capsicum_annuum | PHT91504 | 73.0539 | 50.2994 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.2927 | 52.439 | vigna_radiata | Vradi10g03480.1 | 71.3376 | 54.7771 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 48.7805 | 41.4634 | vigna_radiata | Vradi08g18010.1 | 30.4183 | 25.8555 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.1219 | 53.6585 | sesamum_indicum | SIN_1025677.t.cds1 | 70.5521 | 53.9877 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 71.9512 | 53.0488 | helianthus_annuus | CDS:HanXRQr2_Chr14g0650481.1 | 70.2381 | 51.7857 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 42.0732 | 35.3659 | lolium_perenne | cds.KYUSt_chr2.8260 | 66.3462 | 55.7692 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75.6098 | 52.439 | solanum_tuberosum | PGSC0003DMT400055231 | 74.6988 | 51.8072 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.9024 | 54.2683 | ananas_comosus | Aco004108.1.mrna1.cds1 | 65.3179 | 51.4451 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.6829 | 52.439 | chenopodium_quinoa | AUR62022672-RA:cds | 66.8675 | 51.8072 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 66.4634 | 51.8293 | chenopodium_quinoa | AUR62004556-RA:cds | 65.6627 | 51.2048 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 55.4878 | 42.6829 | chara_braunii | GBG68327 | 46.1929 | 35.533 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 73.7805 | 60.3659 | corylus_avellana | Cav07g03000.t1.cds1 | 71.5976 | 58.5799 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 73.1707 | 56.7073 | ipomoea_triloba | itb03g09280.t1 | 71.4286 | 55.3571 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 76.2195 | 65.2439 | kalanchoe_fedtschenkoi | Kaladp0041s0033.1.v1.1.CDS.1 | 75.3012 | 64.4578 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 72.561 | 58.5366 | eucalyptus_grandis | KCW59557 | 66.1111 | 53.3333 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 68.9024 | 52.439 | trifolium_pratense | Tp57577_TGAC_v2_mRNA8301 | 72.9032 | 55.4839 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 78.0488 | 62.1951 | gossypium_raimondii | KJB71148 | 72.7273 | 57.9545 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.7317 | 54.2683 | arabidopsis_lyrata | scaffold_700313.1 | 69.4611 | 53.2934 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 64.0244 | 50.6098 | asparagus_officinalis | ONK75518 | 66.4557 | 52.5316 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.1219 | 60.3659 | musa_acuminata | Ma10_p18960.1 | 69.697 | 60 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 64.0244 | 55.4878 | musa_acuminata | Ma06_p12000.1 | 65.625 | 56.875 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.1219 | 53.6585 | arabidopsis_halleri | g02952.t1.cds1 | 68.8623 | 52.6946 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75.6098 | 57.3171 | rosa_chinensis | PRQ19433 | 67.027 | 50.8108 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 79.8781 | 63.4146 | rosa_chinensis | PRQ24151 | 64.8515 | 51.4851 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 78.0488 | 62.8049 | rosa_chinensis | PRQ19428 | 56.6372 | 45.5752 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 71.9512 | 59.1463 | juglans_regia | cds.Jr07_00570_p1 | 57.2816 | 47.0874 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 70.7317 | 57.9268 | dioscorea_rotundata | DRNTG_11448.3.cds1 | 68.6391 | 56.213 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 64.0244 | 51.8293 | olea_europaea | OE9A070204C1 | 80.7692 | 65.3846 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 44.5122 | 38.4146 | olea_europaea | OE9A119530C1 | 72.2772 | 62.3762 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 73.1707 | 57.3171 | actinidia_chinensis | PSS30688 | 70.1754 | 54.9708 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 77.439 | 64.0244 | prunus_avium | Pav_sc0000260.1_g610.1.mk:mrna | 56.9507 | 47.0852 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 78.6585 | 64.6341 | prunus_avium | Pav_sc0006916.1_g020.1.mk:mrna | 57.8475 | 47.5336 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75.6098 | 60.3659 | quercus_suber | cds-POF01611.1 | 76.0736 | 60.7362 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 71.9512 | 51.8293 | nicotiana_attenuata | OIT06433 | 71.5152 | 51.5152 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 67.0732 | 55.4878 | citrus_clementina | ESR39350 | 65.0888 | 53.8462 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 71.9512 | 58.5366 | daucus_carota | KZM88726 | 69.4118 | 56.4706 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 78.6585 | 64.0244 | nymphaea_colorata | NC4G0150910.1:cds | 51.1905 | 41.6667 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 44.5122 | 34.7561 | ostreococcus_lucimarinus | ABO99846 | 52.8986 | 41.3043 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75.6098 | 59.1463 | coffea_canephora | CDP02609 | 40.7895 | 31.9079 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 74.3902 | 63.4146 | pistacia_vera | cds-EVM0017612.1 | 70.9302 | 60.4651 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75 | 59.7561 | quercus_lobata | QL06p039532:mrna:CDS:1 | 75.4601 | 60.1227 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 62.1951 | 51.8293 | quercus_lobata | QL08p056981:mrna:CDS:1 | 72.8571 | 60.7143 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 53.0488 | 34.7561 | selaginella_moellendorffii | EFJ12787 | 57.6159 | 37.7483 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 53.0488 | 34.7561 | selaginella_moellendorffii | EFJ13947 | 57.6159 | 37.7483 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 77.439 | 67.0732 | vitis_vinifera | Vitvi07g01572_P001 | 76.9697 | 66.6667 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 75 | 62.8049 | corchorus_capsularis | OMO56463 | 71.5116 | 59.8837 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 72.561 | 56.0976 | fraxinus_excelsior | FRAEX38873_v2_000084280.1.cds1 | 69.5906 | 53.8012 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 59.7561 | 48.1707 | fraxinus_excelsior | FRAEX38873_v2_000336360.1.cds1 | 76.5625 | 61.7188 |
| AMTR_s00065p00169990 | amborella_trichopoda | ERN18632 | 76.2195 | 60.3659 | citrullus_lanatus | Cla97C01G016790.1 | 74.4048 | 58.9286 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
