Description

Ensembl ID AMTR_s00065p00118020 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 652 bases Strand Plus strand
Position AmTr_v1.0_scaffold00065 : 1540919 - 1541570 RNA binding domain Ribosomal_L12
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN18566 Ribosomal_L12 PF00542 3.8e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN18566 441 146aa ERN18566

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00065p00118020

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00065p00118020amborella_trichopodaERN1856632.876723.9726brassica_junceacds.BjuA02g18420S35.294125.7353
AMTR_s00065p00118020amborella_trichopodaERN1856648.630132.8767brassica_junceacds.BjuA05g25350S33.971322.9665
AMTR_s00065p00118020amborella_trichopodaERN1856639.72625.3425brassica_napusCDY705745837
AMTR_s00065p00118020amborella_trichopodaERN1856647.945231.5068brassica_napusCDY4842241.916227.5449
AMTR_s00065p00118020amborella_trichopodaERN1856643.835630.8219brassica_napusCDY0824142.105329.6053
AMTR_s00065p00118020amborella_trichopodaERN1856634.931525.3425brassica_napusCDX9519463.7546.25
AMTR_s00065p00118020amborella_trichopodaERN1856652.739736.9863brassica_oleraceaBo5g098420.140.526328.4211
AMTR_s00065p00118020amborella_trichopodaERN1856646.575331.5068brassica_oleraceaBo00579s230.141.212127.8788
AMTR_s00065p00118020amborella_trichopodaERN1856649.315134.9315fraxinus_excelsiorFRAEX38873_v2_000256710.1.cds161.538543.5897

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression