RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | AMTR_s00065p00118020 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
hypothetical protein
|
Status |
Confidence |
Length |
652 bases |
Strand |
Plus strand |
Position |
AmTr_v1.0_scaffold00065 : 1540919 - 1541570 |
RNA binding domain |
Ribosomal_L12 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ERN18566 |
Ribosomal_L12 |
PF00542 |
3.8e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ERN18566 |
441 |
146aa |
ERN18566 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
AMTR_s00065p00118020 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 32.8767 | 23.9726 | brassica_juncea | cds.BjuA02g18420S | 35.2941 | 25.7353 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 48.6301 | 32.8767 | brassica_juncea | cds.BjuA05g25350S | 33.9713 | 22.9665 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 39.726 | 25.3425 | brassica_napus | CDY70574 | 58 | 37 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 47.9452 | 31.5068 | brassica_napus | CDY48422 | 41.9162 | 27.5449 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 43.8356 | 30.8219 | brassica_napus | CDY08241 | 42.1053 | 29.6053 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 34.9315 | 25.3425 | brassica_napus | CDX95194 | 63.75 | 46.25 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 52.7397 | 36.9863 | brassica_oleracea | Bo5g098420.1 | 40.5263 | 28.4211 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 46.5753 | 31.5068 | brassica_oleracea | Bo00579s230.1 | 41.2121 | 27.8788 |
AMTR_s00065p00118020 | amborella_trichopoda | ERN18566 | 49.3151 | 34.9315 | fraxinus_excelsior | FRAEX38873_v2_000256710.1.cds1 | 61.5385 | 43.5897 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |