Description

Ensembl ID AMTR_s00057p00084850 Gene ID Accession -
Symbol Alias - Full Name Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Status Confidence Length 8357 bases Strand Minus strand
Position AmTr_v1.0_scaffold00057 : 965206 - 973562 RNA binding domain DNA_pol_A_exo1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN16792 DNA_pol_A_exo1 PF01612 1.7e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN16792 1716 571aa ERN16792

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00057p00084850amborella_trichopodaERN0330628.287816.3772amborella_trichopodaERN1679219.96511.5587
AMTR_s00057p00084850amborella_trichopodaERN1591141.747620.3883amborella_trichopodaERN1679215.06137.35552

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00057p00084850amborella_trichopodaERN1679273.3857.0928papaver_somniferumRZC5626072.61756.4991
AMTR_s00057p00084850amborella_trichopodaERN1679231.173421.5412papaver_somniferumRZC8008266.417945.8955
AMTR_s00057p00084850amborella_trichopodaERN1679255.341534.5009marchantia_polymorphaPTQ3801127.31217.0268
AMTR_s00057p00084850amborella_trichopodaERN1679274.255759.0193ficus_caricaFCD_00008466-RA:cds72.727357.8045
AMTR_s00057p00084850amborella_trichopodaERN1679214.535911.5587beta_vulgarisKMT1366847.428637.7143
AMTR_s00057p00084850amborella_trichopodaERN1679269.702353.7653beta_vulgarisKMT1428468.620752.931
AMTR_s00057p00084850amborella_trichopodaERN1679225.744318.5639beta_vulgarisKMT1682849.494935.6902
AMTR_s00057p00084850amborella_trichopodaERN1679271.628756.7426theobroma_cacaoEOY1161370.761256.0554
AMTR_s00057p00084850amborella_trichopodaERN1679230.64821.0158cucumis_meloMELO3C035005.2.153.353736.5854
AMTR_s00057p00084850amborella_trichopodaERN1679269.001852.3643cucumis_meloMELO3C015263.2.167.93151.5517
AMTR_s00057p00084850amborella_trichopodaERN1679265.32449.2119arabidopsis_thalianaAT1G56310.163.327747.708
AMTR_s00057p00084850amborella_trichopodaERN1679272.679557.6182populus_trichocarpaPotri.005G020000.4.v4.171.305856.5292
AMTR_s00057p00084850amborella_trichopodaERN1679269.527152.7145cucumis_sativusKGN6601868.448351.8966
AMTR_s00057p00084850amborella_trichopodaERN1679266.900250.7881brassica_junceacds.BjuA09g54290S37.087428.1553
AMTR_s00057p00084850amborella_trichopodaERN1679266.72550.2627brassica_napusCDY4171866.260949.913
AMTR_s00057p00084850amborella_trichopodaERN1679266.549950.2627brassica_napusCDY5926266.317650.0873
AMTR_s00057p00084850amborella_trichopodaERN1679272.854659.0193prunus_persicaONI0431573.758959.7518
AMTR_s00057p00084850amborella_trichopodaERN1679269.877454.1156cajanus_cajanC.cajan_06852.t7054.2105
AMTR_s00057p00084850amborella_trichopodaERN1679271.453658.1436malus_domestica_goldenmRNA:MD12G017370071.704758.348
AMTR_s00057p00084850amborella_trichopodaERN1679273.204958.8441malus_domestica_goldenmRNA:MD04G015910071.088457.1429
AMTR_s00057p00084850amborella_trichopodaERN1679270.402853.4151glycine_maxKRH3384571.024753.8869
AMTR_s00057p00084850amborella_trichopodaERN1679270.402854.9912glycine_maxKRG9295270.402854.9912
AMTR_s00057p00084850amborella_trichopodaERN1679272.679559.0193prunus_dulcisVVA2632473.581659.7518
AMTR_s00057p00084850amborella_trichopodaERN1679270.928255.3415lupinus_angustifoliusOIW0709567.05352.3179
AMTR_s00057p00084850amborella_trichopodaERN1679269.35253.0648lupinus_angustifoliusOIV9088569.473753.1579
AMTR_s00057p00084850amborella_trichopodaERN1679269.001853.9405phaseolus_vulgarisESW1698169.244354.1301
AMTR_s00057p00084850amborella_trichopodaERN1679268.476451.6637pisum_sativumPsat0s1118g0080.1.cds69.69752.5847
AMTR_s00057p00084850amborella_trichopodaERN1679264.623549.9124vigna_angularisKOM3547667.458952.1024
AMTR_s00057p00084850amborella_trichopodaERN1679269.001854.4659vigna_unguiculataVigun07g141200.1.v1.269.122854.5614
AMTR_s00057p00084850amborella_trichopodaERN1679273.905458.4939manihot_esculentaOAY4397672.260357.1918
AMTR_s00057p00084850amborella_trichopodaERN1679266.024549.2119solanum_lycopersicumSolyc01g100270.3.166.725749.7345
AMTR_s00057p00084850amborella_trichopodaERN1679262.872247.4606capsicum_annuumPHT6244866.977650.5597
AMTR_s00057p00084850amborella_trichopodaERN1679268.651554.2907vigna_radiataVradi08g12070.168.651554.2907
AMTR_s00057p00084850amborella_trichopodaERN1679220.840616.4623sesamum_indicumSIN_1025882.t62.303749.2147
AMTR_s00057p00084850amborella_trichopodaERN1679270.227751.8389lactuca_sativacds-PLY88143.169.018950.9466
AMTR_s00057p00084850amborella_trichopodaERN1679270.402852.3643helianthus_annuusmRNA:HanXRQr2_Chr10g044106168.835651.1986
AMTR_s00057p00084850amborella_trichopodaERN1679271.453655.3415avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0000991.572.597956.2278
AMTR_s00057p00084850amborella_trichopodaERN1679271.453655.1664avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0000984.172.597956.0498
AMTR_s00057p00084850amborella_trichopodaERN1679271.97955.8669avena_sativa_ot3098cds.AVESA.00001b.r3.1Cg0001690.473.131756.7616
AMTR_s00057p00084850amborella_trichopodaERN1679258.844145.7093lolium_perennecds.KYUSt_chr1.2630872.88556.6161
AMTR_s00057p00084850amborella_trichopodaERN1679265.148947.986oryza_longistaminataKN541152.1_FGP00244.233132.5803
AMTR_s00057p00084850amborella_trichopodaERN1679271.97955.8669avena_sativa_sangAVESA.00010b.r2.1CG0082730.2.CDS73.131756.7616
AMTR_s00057p00084850amborella_trichopodaERN1679271.453655.3415avena_sativa_sangAVESA.00010b.r2.1AG0056630.2.CDS72.597956.2278
AMTR_s00057p00084850amborella_trichopodaERN1679271.453655.1664avena_sativa_sangAVESA.00010b.r2.1DG0175210.3.CDS72.597956.0498
AMTR_s00057p00084850amborella_trichopodaERN1679261.996546.9352solanum_tuberosumPGSC0003DMT40000729970.658753.493
AMTR_s00057p00084850amborella_trichopodaERN1679269.001850.7881oryza_rufipogonORUFI05G14180.172.161253.1136
AMTR_s00057p00084850amborella_trichopodaERN1679271.803954.641oryza_brachyanthaOB05G21150.172.953755.516
AMTR_s00057p00084850amborella_trichopodaERN1679271.453653.4151oryza_glaberrimaORGLA05G0112200.170.344852.5862
AMTR_s00057p00084850amborella_trichopodaERN1679255.341540.8056oryza_punctataOPUNC05G11280.171.331852.5959
AMTR_s00057p00084850amborella_trichopodaERN1679250.788137.303setaria_italicaKQL1588465.168547.8652
AMTR_s00057p00084850amborella_trichopodaERN1679267.075350.4378setaria_viridisTKW2782068.149551.2456
AMTR_s00057p00084850amborella_trichopodaERN1679267.95150.0876sorghum_bicolorEES1806069.039150.8897
AMTR_s00057p00084850amborella_trichopodaERN1679267.775852.7145triticum_turgidumTRITD1Bv1G136940.172.744456.5789
AMTR_s00057p00084850amborella_trichopodaERN1679269.527153.9405triticum_turgidumTRITD1Av1G144790.269.527153.9405
AMTR_s00057p00084850amborella_trichopodaERN1679271.103355.3415secale_cerealeSECCE1Rv1G0033750.172.24256.2278
AMTR_s00057p00084850amborella_trichopodaERN1679270.928255.1664triticum_aestivumTraesCS1B02G240500.172.064156.0498
AMTR_s00057p00084850amborella_trichopodaERN1679271.453655.5166triticum_aestivumTraesCS1D02G227900.172.597956.4057
AMTR_s00057p00084850amborella_trichopodaERN1679271.278555.3415triticum_aestivumTraesCS1A02G226500.172.419956.2278
AMTR_s00057p00084850amborella_trichopodaERN1679268.476450.0876zea_maysZm00001eb347420_P00369.449450.7993
AMTR_s00057p00084850amborella_trichopodaERN1679223.117320.3152ananas_comosusAco002522.1.mrna179.041969.4611
AMTR_s00057p00084850amborella_trichopodaERN1679228.721513.6602caenorhabditis_elegansZK1098.8.118.0228.57143
AMTR_s00057p00084850amborella_trichopodaERN1679229.947511.7338caenorhabditis_elegansZK1098.3.121.81128.54592
AMTR_s00057p00084850amborella_trichopodaERN1679229.772315.2364drosophila_melanogasterFBpp008102727.213.92
AMTR_s00057p00084850amborella_trichopodaERN1679228.546415.7618homo_sapiensENSP0000034047418.607310.274
AMTR_s00057p00084850amborella_trichopodaERN1679267.075351.4886chenopodium_quinoaAUR62000693-RA:cds69.00952.973
AMTR_s00057p00084850amborella_trichopodaERN1679223.117312.4343chara_brauniiGBG8838716.58.875
AMTR_s00057p00084850amborella_trichopodaERN1679270.928256.042corylus_avellanaCav02g05340.t165.960952.1173
AMTR_s00057p00084850amborella_trichopodaERN1679261.821446.9352brachypodium_distachyonKQK0673873.849456.0669
AMTR_s00057p00084850amborella_trichopodaERN1679267.250450.0876oryza_glumipatulaOGLUM05G13900.165.084748.4746
AMTR_s00057p00084850amborella_trichopodaERN1679267.775850.613oryza_meridionalisOMERI05G11750.167.775850.613
AMTR_s00057p00084850amborella_trichopodaERN1679258.66946.2347ipomoea_trilobaitb15g13680.t270.083755.2301
AMTR_s00057p00084850amborella_trichopodaERN1679272.679554.641kalanchoe_fedtschenkoiKaladp0057s0131.1.v1.171.428653.7005
AMTR_s00057p00084850amborella_trichopodaERN1679270.928255.3415triticum_urartuTuG1812G0100002647.01.T0270.312554.8611
AMTR_s00057p00084850amborella_trichopodaERN1679211.03338.23117eucalyptus_grandisKCW8522274.117655.2941
AMTR_s00057p00084850amborella_trichopodaERN1679215.761813.31eucalyptus_grandisKCW8482981.081168.4685
AMTR_s00057p00084850amborella_trichopodaERN1679217.33813.31eucalyptus_grandisKCW8524458.928645.2381
AMTR_s00057p00084850amborella_trichopodaERN1679270.753152.1891cynara_cardunculusKVH8801270.260951.8261
AMTR_s00057p00084850amborella_trichopodaERN1679269.001852.8897trifolium_pratenseTp57577_TGAC_v2_mRNA268758.718345.0075
AMTR_s00057p00084850amborella_trichopodaERN1679271.628755.6918gossypium_raimondiiKJB8108669.914554.359
AMTR_s00057p00084850amborella_trichopodaERN1679266.199650.0876arabidopsis_lyrataAl_scaffold_0001_517066.432350.2636
AMTR_s00057p00084850amborella_trichopodaERN1679271.453654.9912hordeum_vulgareHORVU.MOREX.r3.1HG0061460.172.597955.8719
AMTR_s00057p00084850amborella_trichopodaERN1679269.001850.9632oryza_barthiiOBART05G13110.172.161253.2967
AMTR_s00057p00084850amborella_trichopodaERN1679270.928257.0928asparagus_officinalisONK6328369.468355.9177
AMTR_s00057p00084850amborella_trichopodaERN1679266.024549.9124arabidopsis_hallerig24790.t164.554848.8014
AMTR_s00057p00084850amborella_trichopodaERN1679269.176951.3135eragrostis_tefEt_9A_061541.CDS70.535752.3214
AMTR_s00057p00084850amborella_trichopodaERN1679269.702351.6637eragrostis_tefEt_9B_064107.CDS59.314543.9642
AMTR_s00057p00084850amborella_trichopodaERN1679270.227754.4659corymbia_citriodoracds-KAF8038871.168.900353.4364
AMTR_s00057p00084850amborella_trichopodaERN1679218.388814.1856corymbia_citriodoracds-KAF8038878.168.181852.5974
AMTR_s00057p00084850amborella_trichopodaERN1679267.775852.8897rosa_chinensisPRQ2113139.814831.07
AMTR_s00057p00084850amborella_trichopodaERN1679271.803957.268rosa_chinensisPRQ4235971.057256.6724
AMTR_s00057p00084850amborella_trichopodaERN1679274.956260.0701juglans_regiacds.Jr08_20530_p167.936554.4444
AMTR_s00057p00084850amborella_trichopodaERN1679273.905459.7198juglans_regiacds.Jr11_03990_p172.260358.3904
AMTR_s00057p00084850amborella_trichopodaERN1679266.549950.2627brassica_oleraceaBo9g055740.166.317650.0873
AMTR_s00057p00084850amborella_trichopodaERN1679271.278553.2399oryza_indicaBGIOSGA019684-PA70.172452.4138
AMTR_s00057p00084850amborella_trichopodaERN1679221.36612.0841ciona_savignyiENSCSAVP0000000972024.448913.8277
AMTR_s00057p00084850amborella_trichopodaERN1679267.95151.6637leersia_perrieriLPERR05G10350.261.392446.6772
AMTR_s00057p00084850amborella_trichopodaERN1679267.250450.613olea_europaeaOE9A059999C268.449251.5152
AMTR_s00057p00084850amborella_trichopodaERN1679269.176952.5394olea_europaeaOE9A002777C166.949250.8475
AMTR_s00057p00084850amborella_trichopodaERN1679271.628755.5166actinidia_chinensisPSS0306271.006955.0347
AMTR_s00057p00084850amborella_trichopodaERN1679270.402854.641actinidia_chinensisPSS2885169.791754.1667
AMTR_s00057p00084850amborella_trichopodaERN1679272.504458.3187prunus_aviumPav_sc0000907.1_g620.1.mk:mrna71.626357.6125
AMTR_s00057p00084850amborella_trichopodaERN1679274.080659.0193quercus_subercds-POF10083.167.464153.748
AMTR_s00057p00084850amborella_trichopodaERN1679272.329254.8161nicotiana_attenuataOIT0757470.238153.2313
AMTR_s00057p00084850amborella_trichopodaERN1679268.651554.1156citrus_clementinaESR4674771.143456.0799
AMTR_s00057p00084850amborella_trichopodaERN1679246.059533.275brassica_rapa_ro18A09p022250.1_BraROA.166.080447.7387
AMTR_s00057p00084850amborella_trichopodaERN1679253.239939.4046daucus_carotaKZM8819561.538545.5466
AMTR_s00057p00084850amborella_trichopodaERN1679267.250451.3135daucus_carotaKZN0457669.189252.7928
AMTR_s00057p00084850amborella_trichopodaERN1679244.308232.049nymphaea_colorataNC5G0161800.1:cds60.526343.7799
AMTR_s00057p00084850amborella_trichopodaERN1679219.789810.8581ostreococcus_lucimarinusABO9531922.736412.4748
AMTR_s00057p00084850amborella_trichopodaERN1679267.425650.4378coffea_canephoraCDP1822468.383751.1545
AMTR_s00057p00084850amborella_trichopodaERN1679270.227754.4659aegilops_tauschiiAET1Gv20561100.168.081552.8014
AMTR_s00057p00084850amborella_trichopodaERN1679273.204957.9685pistacia_veracds-EVM0024077.172.695757.5652
AMTR_s00057p00084850amborella_trichopodaERN1679232.574422.2417digitaria_exilisDexi3B01G0027390.1:cds48.186532.9016
AMTR_s00057p00084850amborella_trichopodaERN1679229.422121.1909digitaria_exilisDexi3A01G0026560.1:cds66.666748.0159
AMTR_s00057p00084850amborella_trichopodaERN1679271.278553.2399oryza_sativaOs05t0357100-0170.172452.4138
AMTR_s00057p00084850amborella_trichopodaERN1679267.600750.613panicum_halliiPUZ6643368.683351.4235
AMTR_s00057p00084850amborella_trichopodaERN1679274.60658.8441quercus_lobataQL03p018132:mrna71.838156.661
AMTR_s00057p00084850amborella_trichopodaERN1679269.176951.6637eragrostis_curvulaTVU1895270.4152.5847
AMTR_s00057p00084850amborella_trichopodaERN1679265.849448.5114camelina_sativaCsa05g062110.165.277848.0903
AMTR_s00057p00084850amborella_trichopodaERN1679265.148949.9124camelina_sativaCsa17g098620.165.49350.1761
AMTR_s00057p00084850amborella_trichopodaERN1679265.32449.387camelina_sativaCsa07g026190.160.749245.9283
AMTR_s00057p00084850amborella_trichopodaERN1679273.204956.3923vitis_viniferaVitvi14g00116_P00171.331154.9488
AMTR_s00057p00084850amborella_trichopodaERN1679265.32449.9124eutrema_salsugineumESQ2972864.089348.9691
AMTR_s00057p00084850amborella_trichopodaERN1679267.250450.0876echinochloa_crusgalliscaffold418.2.cds68.327450.8897
AMTR_s00057p00084850amborella_trichopodaERN1679266.549950.2627echinochloa_crusgalliscaffold52.503.cds68.100451.4337
AMTR_s00057p00084850amborella_trichopodaERN1679256.392340.2802echinochloa_crusgalliscaffold128.150.cds66.119147.2279
AMTR_s00057p00084850amborella_trichopodaERN1679271.97957.0928corchorus_capsularisOMO8631166.504952.7508
AMTR_s00057p00084850amborella_trichopodaERN1679266.900251.8389fraxinus_excelsiorFRAEX38873_v2_000247490.1.cds66.900251.8389
AMTR_s00057p00084850amborella_trichopodaERN1679266.199650.0876fraxinus_excelsiorFRAEX38873_v2_000091840.2.cds65.172449.3103
AMTR_s00057p00084850amborella_trichopodaERN1679269.35252.8897citrullus_lanatusCla97C03G068040.166.110250.4174
AMTR_s00057p00084850amborella_trichopodaERN1679269.001850.9632oryza_nivaraONIVA05G13780.172.161253.2967

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression