Description

Ensembl ID AMTR_s00037p00133600 Gene ID Accession -
Symbol Alias - Full Name Met-10+ like family protein / kelch repeat-containing protein
Status Confidence Length 73800 bases Strand Minus strand
Position AmTr_v1.0_scaffold00037 : 1856211 - 1930010 RNA binding domain Met_10 , TYW3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN17346 Met_10 PF02475 3.5e-32 1
ERN17346 TYW3 PF02676 1.2e-60 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN17346 3339 1112aa ERN17346

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00037p00133600amborella_trichopodaERN1160527.485413.8402amborella_trichopodaERN1734612.67996.38489
AMTR_s00037p00133600amborella_trichopodaERM9839332.93116.5517amborella_trichopodaERN1734617.17638.63309

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00037p00133600amborella_trichopodaERN1734612.56.29496chondrus_crispusCDF3220631.165915.6951
AMTR_s00037p00133600amborella_trichopodaERN1734667.086351.4389papaver_somniferumRZC6565171.387654.7368
AMTR_s00037p00133600amborella_trichopodaERN1734666.906551.1691papaver_somniferumRZC4633069.40353.0784
AMTR_s00037p00133600amborella_trichopodaERN1734656.834541.277marchantia_polymorphaPTQ2966758.410442.4214
AMTR_s00037p00133600amborella_trichopodaERN1734664.208649.5504cannabis_sativa_femalecds.evm.model.02.299768.2652.6769
AMTR_s00037p00133600amborella_trichopodaERN1734660.791446.4928beta_vulgarisKMT0417566.209650.6366
AMTR_s00037p00133600amborella_trichopodaERN1734665.377751.1691theobroma_cacaoEOY2869469.370254.2939
AMTR_s00037p00133600amborella_trichopodaERN1734659.98247.0324cucumis_meloMELO3C007389.2.164.883350.8755
AMTR_s00037p00133600amborella_trichopodaERN1734662.589947.7518arabidopsis_thalianaAT4G04670.169.949753.3668
AMTR_s00037p00133600amborella_trichopodaERN1734663.219449.6403populus_trichocarpaPotri.004G015200.4.v4.168.120253.4884
AMTR_s00037p00133600amborella_trichopodaERN1734662.050448.6511cucumis_sativusKGN4911362.38748.915
AMTR_s00037p00133600amborella_trichopodaERN1734662.050447.8417brassica_napusCDX9087568.384552.7255
AMTR_s00037p00133600amborella_trichopodaERN1734661.600747.482brassica_napusCDY2131369.052453.2258
AMTR_s00037p00133600amborella_trichopodaERN1734664.928150.8094prunus_persicaONI0996369.623954.4841
AMTR_s00037p00133600amborella_trichopodaERN1734663.489250cajanus_cajanC.cajan_04424.t65.735651.7691
AMTR_s00037p00133600amborella_trichopodaERN1734664.208650.1799malus_domestica_goldenmRNA:MD10G027360069.387854.2274
AMTR_s00037p00133600amborella_trichopodaERN1734663.129549.3705glycine_maxKRH5108865.302351.0698
AMTR_s00037p00133600amborella_trichopodaERN1734664.748250.7194prunus_dulcisVVA2159869.431154.3877
AMTR_s00037p00133600amborella_trichopodaERN1734664.658349.6403medicago_truncatulaAES9263168.738152.7725
AMTR_s00037p00133600amborella_trichopodaERN1734653.956838.4892physcomitrium_patensPp3c9_15020V3.253.050437.8426
AMTR_s00037p00133600amborella_trichopodaERN1734663.75948.4712phaseolus_vulgarisESW2594167.331451.1871
AMTR_s00037p00133600amborella_trichopodaERN1734664.298650.2698pisum_sativumPsat4g006680.2.cds67.965853.1369
AMTR_s00037p00133600amborella_trichopodaERN1734615.01811.5108vigna_angularisKOM3380764.980549.8054
AMTR_s00037p00133600amborella_trichopodaERN1734663.938948.741vigna_unguiculataVigun03g446700.1.v1.268.365452.1154
AMTR_s00037p00133600amborella_trichopodaERN1734649.550439.6583manihot_esculentaOAY2592671.558457.2727
AMTR_s00037p00133600amborella_trichopodaERN1734665.01848.2014solanum_lycopersicumSolyc05g055610.3.169.653251.6378
AMTR_s00037p00133600amborella_trichopodaERN1734663.219447.3921capsicum_annuumPHT8254668.585451.4146
AMTR_s00037p00133600amborella_trichopodaERN1734663.039647.2122sesamum_indicumSIN_1006999.t66.953250.1433
AMTR_s00037p00133600amborella_trichopodaERN1734663.309447.8417lactuca_sativacds-PLY66853.169.70352.6733
AMTR_s00037p00133600amborella_trichopodaERN1734648.651136.6906helianthus_annuusmRNA:HanXRQr2_Chr05g019343170.534653.1943
AMTR_s00037p00133600amborella_trichopodaERN1734616.007211.6906helianthus_annuusCDS:HanXRQr2_Chr05g0193441.163.120646.0993
AMTR_s00037p00133600amborella_trichopodaERN1734662.410147.2122helianthus_annuusmRNA:HanXRQr2_Chr05g019345169.452.5
AMTR_s00037p00133600amborella_trichopodaERN1734662.589948.2914avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000109.363.272748.8182
AMTR_s00037p00133600amborella_trichopodaERN1734662.589947.9317avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0000704.263.215348.4105
AMTR_s00037p00133600amborella_trichopodaERN1734662.769848.2914avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0002672.563.454548.8182
AMTR_s00037p00133600amborella_trichopodaERN1734659.442445.9532lolium_perennecds.KYUSt_chr2.1953566.432251.3568
AMTR_s00037p00133600amborella_trichopodaERN1734654.496439.2986oryza_longistaminataKN539000.1_FGP00252.241437.6724
AMTR_s00037p00133600amborella_trichopodaERN1734662.589947.9317avena_sativa_sangAVESA.00010b.r2.2CG0275550.1.CDS64.029449.034
AMTR_s00037p00133600amborella_trichopodaERN1734650.809437.7698avena_sativa_sangAVESA.00010b.r2.2AG0198480.1.CDS62.019846.1032
AMTR_s00037p00133600amborella_trichopodaERN1734662.769848.2914avena_sativa_sangAVESA.00010b.r2.2DG0350260.1.CDS64.272649.4475
AMTR_s00037p00133600amborella_trichopodaERN1734648.651135.2518solanum_tuberosumPGSC0003DMT40006006772.42352.4766
AMTR_s00037p00133600amborella_trichopodaERN1734663.309446.8525oryza_rufipogonORUFI07G16640.166.352549.1046
AMTR_s00037p00133600amborella_trichopodaERN1734661.510846.9424oryza_brachyanthaOB07G21940.165.39249.9044
AMTR_s00037p00133600amborella_trichopodaERN1734658.093542.9856oryza_glaberrimaORGLA07G0134000.161.936745.8293
AMTR_s00037p00133600amborella_trichopodaERN1734662.949646.8525oryza_punctataOPUNC07G14870.166.539949.5247
AMTR_s00037p00133600amborella_trichopodaERN1734657.823744.4245setaria_italicaKQL2599063.287448.622
AMTR_s00037p00133600amborella_trichopodaERN1734662.140347.8417setaria_viridisTKW3498363.863249.1682
AMTR_s00037p00133600amborella_trichopodaERN1734661.960448.1115sorghum_bicolorKXG3632063.737349.4912
AMTR_s00037p00133600amborella_trichopodaERN1734662.320148.5611triticum_turgidumTRITD2Av1G090090.363.287749.3151
AMTR_s00037p00133600amborella_trichopodaERN1734662.230248.0216triticum_turgidumTRITD2Bv1G093910.263.196348.7671
AMTR_s00037p00133600amborella_trichopodaERN1734662.050448.2914secale_cerealeSECCE2Rv1G0090130.163.477549.402
AMTR_s00037p00133600amborella_trichopodaERN1734662.050448.0216triticum_aestivumTraesCS2B02G248800.163.477549.126
AMTR_s00037p00133600amborella_trichopodaERN1734661.690648.2014triticum_aestivumTraesCS2D02G229200.163.109549.31
AMTR_s00037p00133600amborella_trichopodaERN1734662.050448.4712triticum_aestivumTraesCS2A02G223200.163.477549.586
AMTR_s00037p00133600amborella_trichopodaERN1734661.510847.482zea_maysZm00001eb322630_P00263.333348.8889
AMTR_s00037p00133600amborella_trichopodaERN1734613.75911.6906ananas_comosusAco029810.1.mrna185.474972.6257
AMTR_s00037p00133600amborella_trichopodaERN1734664.658350.8993ananas_comosusAco010506.1.mrna167.894253.4466
AMTR_s00037p00133600amborella_trichopodaERN1734615.91739.80216caenorhabditis_elegansF40F9.10.138.478323.6957
AMTR_s00037p00133600amborella_trichopodaERN1734612.58998.90288homo_sapiensENSP0000035990454.054138.2239
AMTR_s00037p00133600amborella_trichopodaERN1734612.76988.0036saccharomyces_cerevisiaeYGL050W52.014732.6007
AMTR_s00037p00133600amborella_trichopodaERN1734661.24146.4928chenopodium_quinoaAUR62021945-RA:cds65.733649.9035
AMTR_s00037p00133600amborella_trichopodaERN1734644.064730.5755chara_brauniiGBG8873334.075123.6439
AMTR_s00037p00133600amborella_trichopodaERN1734666.546852.1583corylus_avellanaCav02g34790.t171.566756.0928
AMTR_s00037p00133600amborella_trichopodaERN1734661.690646.9424brachypodium_distachyonKQK1601963.518548.3333
AMTR_s00037p00133600amborella_trichopodaERN1734663.669147.3022oryza_glumipatulaOGLUM07G15900.165.983249.0214
AMTR_s00037p00133600amborella_trichopodaERN1734663.848947.3921oryza_meridionalisOMERI07G12920.167.171249.8581
AMTR_s00037p00133600amborella_trichopodaERN1734663.309449.5504ipomoea_trilobaitb02g03750.t266.103351.7371
AMTR_s00037p00133600amborella_trichopodaERN1734612.14039.08273kalanchoe_fedtschenkoiKaladp0068s0183.1.v1.1.CDS.163.380347.4178
AMTR_s00037p00133600amborella_trichopodaERN1734628.507220.054kalanchoe_fedtschenkoiKaladp0068s0184.1.v1.168.17247.957
AMTR_s00037p00133600amborella_trichopodaERN1734636.061127.9676kalanchoe_fedtschenkoiKaladp0042s0332.1.v1.170.973455.0442
AMTR_s00037p00133600amborella_trichopodaERN1734658.363343.4353kalanchoe_fedtschenkoiKaladp0084s0021.1.v1.168.7551.1653
AMTR_s00037p00133600amborella_trichopodaERN1734612.85976.20504galdieria_sulphurariaEME3213536.294417.5127
AMTR_s00037p00133600amborella_trichopodaERN1734662.050448.4712triticum_urartuTuG1812G0200002597.01.T0263.477549.586
AMTR_s00037p00133600amborella_trichopodaERN1734663.129548.1115eucalyptus_grandisKCW7530766.7350.8555
AMTR_s00037p00133600amborella_trichopodaERN1734613.48926.56475cyanidioschyzon_merolaeCMJ080CT27.272713.2727
AMTR_s00037p00133600amborella_trichopodaERN1734658.003644.1547cynara_cardunculusKVH8961968.544152.1785
AMTR_s00037p00133600amborella_trichopodaERN173469.172667.3741trifolium_pratenseTp57577_TGAC_v2_mRNA2102084.297567.7686
AMTR_s00037p00133600amborella_trichopodaERN1734664.748248.741gossypium_raimondiiKJB5773669.230852.1154
AMTR_s00037p00133600amborella_trichopodaERN1734662.547.7518arabidopsis_lyratafgenesh2_kg.6__3241__AT4G04670.169.779153.3133
AMTR_s00037p00133600amborella_trichopodaERN1734662.679948.6511hordeum_vulgareHORVU.MOREX.r3.2HG0141420.164.121449.77
AMTR_s00037p00133600amborella_trichopodaERN1734663.489246.9424oryza_barthiiOBART07G16210.165.129248.155
AMTR_s00037p00133600amborella_trichopodaERN1734665.467652.518musa_acuminataMa06_p31180.165.116352.2361
AMTR_s00037p00133600amborella_trichopodaERN1734662.769847.482arabidopsis_hallerig21428.t155.484941.9714
AMTR_s00037p00133600amborella_trichopodaERN1734661.420947.3921eragrostis_tefEt_5A_042399.CDS65.23450.3343
AMTR_s00037p00133600amborella_trichopodaERN1734662.140348.2014eragrostis_tefEt_5B_045034.CDS65.746950.9991
AMTR_s00037p00133600amborella_trichopodaERN1734663.848949.8201corymbia_citriodoracds-KAF8030133.167.362452.5617
AMTR_s00037p00133600amborella_trichopodaERN1734663.75950rosa_chinensisPRQ2844969.509854.5098
AMTR_s00037p00133600amborella_trichopodaERN1734666.18753.1475juglans_regiacds.Jr03_11170_p170.430656.555
AMTR_s00037p00133600amborella_trichopodaERN1734660.791446.9424saccharum_spontaneumSspon.02G0048090-1C-mRNA-1:cds62.246848.0663
AMTR_s00037p00133600amborella_trichopodaERN1734661.24147.3921triticum_dicoccoidesTRIDC2BG033540.263.348849.0233
AMTR_s00037p00133600amborella_trichopodaERN1734662.140348.5611triticum_dicoccoidesTRIDC2AG029850.363.162749.3601
AMTR_s00037p00133600amborella_trichopodaERN1734661.690647.482brassica_oleraceaBo3g048400.169.22353.2795
AMTR_s00037p00133600amborella_trichopodaERN1734663.579147.2122oryza_indicaBGIOSGA025799-PA65.281648.4765
AMTR_s00037p00133600amborella_trichopodaERN1734616.27711.6007ciona_savignyiENSCSAVP0000000073862.629844.6367
AMTR_s00037p00133600amborella_trichopodaERN1734664.388550.7194dioscorea_rotundataDRNTG_24732.166.48152.3677
AMTR_s00037p00133600amborella_trichopodaERN1734662.050447.3921leersia_perrieriLPERR07G13570.362.613447.8221
AMTR_s00037p00133600amborella_trichopodaERN1734663.129547.9317olea_europaeaOE9A026264C166.101750.1883
AMTR_s00037p00133600amborella_trichopodaERN1734664.478450actinidia_chinensisPSS2483668.091252.8015
AMTR_s00037p00133600amborella_trichopodaERN1734651.888541.187quercus_subercds-POE67460.170.884556.2654
AMTR_s00037p00133600amborella_trichopodaERN1734658.453245.8633quercus_subercds-POE67462.168.710453.9112
AMTR_s00037p00133600amborella_trichopodaERN1734665.107948.741nicotiana_attenuataOIT2515668.625651.3744
AMTR_s00037p00133600amborella_trichopodaERN1734662.140347.6619citrus_clementinaESR6296768.483752.5273
AMTR_s00037p00133600amborella_trichopodaERN1734661.870547.7518brassica_rapa_ro18A03p031700.1_BraROA.169.706253.7994
AMTR_s00037p00133600amborella_trichopodaERN1734663.848948.5611daucus_carotaKZM8439668.203751.8732
AMTR_s00037p00133600amborella_trichopodaERN1734664.658352.0683nymphaea_colorataNC1G0134790.1:cds65.24552.5408
AMTR_s00037p00133600amborella_trichopodaERN1734616.816512.3201ostreococcus_lucimarinusABO9785667.266249.2806
AMTR_s00037p00133600amborella_trichopodaERN1734663.039647.482coffea_canephoraCDP0439966.508550.0949
AMTR_s00037p00133600amborella_trichopodaERN1734661.690648.2014aegilops_tauschiiAET2Gv20475500.563.109549.31
AMTR_s00037p00133600amborella_trichopodaERN1734665.377750.8094pistacia_veracds-EVM0008130.170.582554.8544
AMTR_s00037p00133600amborella_trichopodaERN1734633.902926.9784digitaria_exilisDexi2B01G0026760.1:cds68.173654.2495
AMTR_s00037p00133600amborella_trichopodaERN1734633.902927.2482digitaria_exilisDexi2A01G0028160.1:cds66.256653.2513
AMTR_s00037p00133600amborella_trichopodaERN1734661.780647.6619panicum_halliiPUZ7223763.611149.0741
AMTR_s00037p00133600amborella_trichopodaERN1734664.838151.7086quercus_lobataQL05p073195:mrna70.272956.0429
AMTR_s00037p00133600amborella_trichopodaERN1734662.410148.1115eragrostis_curvulaTVU3889964.738849.9067
AMTR_s00037p00133600amborella_trichopodaERN1734660.431746.4029eragrostis_curvulaTVU3888764.615449.6154
AMTR_s00037p00133600amborella_trichopodaERN1734662.140347.2122camelina_sativaCsa08g048610.168.824752.2908
AMTR_s00037p00133600amborella_trichopodaERN1734642.805832.554camelina_sativaCsa02g011480.171.794954.6003
AMTR_s00037p00133600amborella_trichopodaERN1734661.780647.0324camelina_sativaCsa13g052430.159.687245.4387
AMTR_s00037p00133600amborella_trichopodaERN1734623.291417.0863selaginella_moellendorffiiEFJ1823776.627256.213
AMTR_s00037p00133600amborella_trichopodaERN1734616.366912.5selaginella_moellendorffiiEFJ2197479.130460.4348
AMTR_s00037p00133600amborella_trichopodaERN1734665.917352.1583vitis_viniferaVitvi10g00098_P00170.345555.6622
AMTR_s00037p00133600amborella_trichopodaERN1734662.949648.2914eutrema_salsugineumESQ3812969.513453.3267
AMTR_s00037p00133600amborella_trichopodaERN1734660.881346.6727echinochloa_crusgalliscaffold43.427.cds63.27148.5047
AMTR_s00037p00133600amborella_trichopodaERN1734661.960447.5719echinochloa_crusgalliscaffold58.200.cds63.443848.7109
AMTR_s00037p00133600amborella_trichopodaERN1734660.971246.6727echinochloa_crusgalliscaffold239.100.cds63.364548.5047
AMTR_s00037p00133600amborella_trichopodaERN1734665.467649.9101corchorus_capsularisOMO7680070.955254.0936
AMTR_s00037p00133600amborella_trichopodaERN1734663.579148.8309fraxinus_excelsiorFRAEX38873_v2_000082000.1.cds66.013150.7003
AMTR_s00037p00133600amborella_trichopodaERN1734662.410149.6403citrullus_lanatusCla97C01G021630.166.34852.7725
AMTR_s00037p00133600amborella_trichopodaERN1734663.129546.9424oryza_nivaraONIVA07G14410.266.477349.4318

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression