Description

Ensembl ID AMTR_s00036p00080390 Gene ID Accession -
Symbol Alias - Full Name Metallo-hydrolase/oxidoreductase superfamily protein
Status Confidence Length 71739 bases Strand Minus strand
Position AmTr_v1.0_scaffold00036 : 893274 - 965012 RNA binding domain Lactamase_B
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN15314 Lactamase_B PF00753 3.2e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN15314 1074 357aa ERN15314

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00036p00080390amborella_trichopodaERN0380320.588212.5668amborella_trichopodaERN1531421.568613.1653
AMTR_s00036p00080390amborella_trichopodaERN1507112.75176.13615amborella_trichopodaERN1531437.254917.9272
AMTR_s00036p00080390amborella_trichopodaERN0165924.512513.0919amborella_trichopodaERN1531424.649913.1653
AMTR_s00036p00080390amborella_trichopodaERM9920552.095837.4251amborella_trichopodaERN1531448.739535.014

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00036p00080390amborella_trichopodaERN1531475.350167.7871papaver_somniferumRZC5186363.294156.9412
AMTR_s00036p00080390amborella_trichopodaERN1531472.829157.423marchantia_polymorphaPTQ4468765.822851.8987
AMTR_s00036p00080390amborella_trichopodaERN1531476.190568.6274ficus_caricaFCD_00005507-RA:cds79.765471.8475
AMTR_s00036p00080390amborella_trichopodaERN1531473.949663.3053beta_vulgarisKMT1366264.705955.3922
AMTR_s00036p00080390amborella_trichopodaERN1531475.910467.2269theobroma_cacaoEOY2711776.553767.7966
AMTR_s00036p00080390amborella_trichopodaERN1531469.467860.7843cucumis_meloMELO3C013096.2.174.698865.3614
AMTR_s00036p00080390amborella_trichopodaERN1531476.750764.7059arabidopsis_thalianaAT3G13800.175.900363.9889
AMTR_s00036p00080390amborella_trichopodaERN1531477.59169.1877populus_trichocarpaPotri.003G036800.1.v4.169.423661.9048
AMTR_s00036p00080390amborella_trichopodaERN1531464.98659.1036cucumis_sativusKGN5981487.21879.3233
AMTR_s00036p00080390amborella_trichopodaERN1531477.871166.3866brassica_junceacds.BjuB07g22360S77.871166.3866
AMTR_s00036p00080390amborella_trichopodaERN1531477.871165.2661brassica_napusCDX7573177.653665.0838
AMTR_s00036p00080390amborella_trichopodaERN1531478.711566.1064brassica_napusCDX8251678.711566.1064
AMTR_s00036p00080390amborella_trichopodaERN1531474.509866.1064prunus_persicaONI1553576.217867.6218
AMTR_s00036p00080390amborella_trichopodaERN1531473.389463.8655cajanus_cajanC.cajan_00490.t79.393969.0909
AMTR_s00036p00080390amborella_trichopodaERN1531443.137338.3754malus_domestica_goldenmRNA:MD17G016150067.841460.3524
AMTR_s00036p00080390amborella_trichopodaERN1531475.0768.3473malus_domestica_goldenmRNA:MD09G016730076.790869.914
AMTR_s00036p00080390amborella_trichopodaERN1531473.949664.7059glycine_maxKRH4413276.967967.3469
AMTR_s00036p00080390amborella_trichopodaERN1531474.509865.5462glycine_maxKRH4710777.777868.4211
AMTR_s00036p00080390amborella_trichopodaERN1531474.789966.6667prunus_dulcisVVA2405776.504368.1948
AMTR_s00036p00080390amborella_trichopodaERN1531473.949665.2661medicago_truncatulaAET0159177.419468.3284
AMTR_s00036p00080390amborella_trichopodaERN1531473.949663.5854lupinus_angustifoliusOIW0492833.889629.1399
AMTR_s00036p00080390amborella_trichopodaERN1531472.268959.1036physcomitrium_patensPp3c2_540V3.162.773751.3382
AMTR_s00036p00080390amborella_trichopodaERN1531471.708763.0252phaseolus_vulgarisESW0753575.964466.7656
AMTR_s00036p00080390amborella_trichopodaERN1531477.030866.6667pisum_sativumPsat4g188120.1.cds80.882470
AMTR_s00036p00080390amborella_trichopodaERN1531473.669564.986vigna_angularisKOM3024877.352968.2353
AMTR_s00036p00080390amborella_trichopodaERN1531473.949664.986vigna_unguiculataVigun10g172600.1.v1.277.647168.2353
AMTR_s00036p00080390amborella_trichopodaERN1531475.910467.7871manihot_esculentaOAY3649875.910467.7871
AMTR_s00036p00080390amborella_trichopodaERN1531476.470667.7871manihot_esculentaOAY5315876.25767.5978
AMTR_s00036p00080390amborella_trichopodaERN1531475.350163.8655solanum_lycopersicumSolyc03g121670.3.165.770255.7457
AMTR_s00036p00080390amborella_trichopodaERN1531475.0764.7059capsicum_annuumPHT6218276.136465.625
AMTR_s00036p00080390amborella_trichopodaERN1531432.49326.8908vigna_radiataVradi09g02050.162.702751.8919
AMTR_s00036p00080390amborella_trichopodaERN1531474.229765.2661sesamum_indicumSIN_1010407.t74.858865.8192
AMTR_s00036p00080390amborella_trichopodaERN1531475.350165.5462lactuca_sativacds-PLY68335.175.988766.1017
AMTR_s00036p00080390amborella_trichopodaERN1531476.190565.5462helianthus_annuusmRNA:HanXRQr2_Chr09g041699176.619765.9155
AMTR_s00036p00080390amborella_trichopodaERN1531444.537837.2549avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0001895.258.241848.7179
AMTR_s00036p00080390amborella_trichopodaERN1531473.669563.8655avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0002305.163.83555.3398
AMTR_s00036p00080390amborella_trichopodaERN1531473.669563.5854avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0001853.162.768554.1766
AMTR_s00036p00080390amborella_trichopodaERN1531474.229764.7059lolium_perennecds.KYUSt_chr5.2782570.105861.1111
AMTR_s00036p00080390amborella_trichopodaERN1531460.784350.4202oryza_longistaminataKN542556.1_FGP00355.927846.3918
AMTR_s00036p00080390amborella_trichopodaERN1531473.389464.1457avena_sativa_sangAVESA.00010b.r2.5CG0892660.1.CDS69.680960.9043
AMTR_s00036p00080390amborella_trichopodaERN1531473.669563.8655avena_sativa_sangAVESA.00010b.r2.5AG0841910.1.CDS69.946860.6383
AMTR_s00036p00080390amborella_trichopodaERN1531473.669563.5854avena_sativa_sangAVESA.00010b.r2.5DG0967630.1.CDS69.946860.3723
AMTR_s00036p00080390amborella_trichopodaERN1531474.229763.3053solanum_tuberosumPGSC0003DMT40000638375.498664.3875
AMTR_s00036p00080390amborella_trichopodaERN1531461.344551.2605oryza_rufipogonORUFI09G07960.153.808444.9631
AMTR_s00036p00080390amborella_trichopodaERN1531474.509864.4258oryza_brachyanthaOB09G14900.172.479662.6703
AMTR_s00036p00080390amborella_trichopodaERN1531475.0764.986oryza_glaberrimaORGLA09G0054700.170.712461.2137
AMTR_s00036p00080390amborella_trichopodaERN1531464.98656.0224oryza_punctataOPUNC09G06310.167.05257.8035
AMTR_s00036p00080390amborella_trichopodaERN1531475.630266.6667setaria_italicaKQL2425872.386163.807
AMTR_s00036p00080390amborella_trichopodaERN1531475.630266.6667setaria_viridisTKW3285272.386163.807
AMTR_s00036p00080390amborella_trichopodaERN1531475.350165.2661sorghum_bicolorOQU8938971.542661.9681
AMTR_s00036p00080390amborella_trichopodaERN1531474.509864.986triticum_turgidumTRITD0Uv1G020550.170.55761.5385
AMTR_s00036p00080390amborella_trichopodaERN1531474.509864.4258triticum_turgidumTRITD5Bv1G116780.369.451760.0522
AMTR_s00036p00080390amborella_trichopodaERN1531474.789965.2661secale_cerealeSECCE5Rv1G0324890.171.262.1333
AMTR_s00036p00080390amborella_trichopodaERN1531474.789964.986triticum_aestivumTraesCS5D02G198600.171.261.8667
AMTR_s00036p00080390amborella_trichopodaERN1531474.789965.2661triticum_aestivumTraesCS5B02G190700.171.262.1333
AMTR_s00036p00080390amborella_trichopodaERN1531474.229764.7059triticum_aestivumTraesCS5A02G192400.170.291861.2732
AMTR_s00036p00080390amborella_trichopodaERN1531474.789964.7059zea_maysZm00001eb311000_P00171.390461.7647
AMTR_s00036p00080390amborella_trichopodaERN1531472.829164.986ananas_comosusAco018575.1.mrna174.285766.2857
AMTR_s00036p00080390amborella_trichopodaERN1531475.910463.8655chenopodium_quinoaAUR62009832-RA:cds76.123664.0449
AMTR_s00036p00080390amborella_trichopodaERN1531452.38143.1373chara_brauniiGBG6318072.200859.4595
AMTR_s00036p00080390amborella_trichopodaERN1531421.568617.3669arabis_alpinaKFK2449789.534972.093
AMTR_s00036p00080390amborella_trichopodaERN1531474.229765.5462brachypodium_distachyonKQJ8999672.010963.587
AMTR_s00036p00080390amborella_trichopodaERN1531461.344551.2605oryza_glumipatulaOGLUM09G07890.153.808444.9631
AMTR_s00036p00080390amborella_trichopodaERN1531471.148561.6246oryza_meridionalisOMERI09G05930.265.97457.1429
AMTR_s00036p00080390amborella_trichopodaERN1531475.910467.7871ipomoea_trilobaitb06g16450.t275.277867.2222
AMTR_s00036p00080390amborella_trichopodaERN1531470.308158.2633kalanchoe_fedtschenkoiKaladp0059s0143.1.v1.168.95657.1429
AMTR_s00036p00080390amborella_trichopodaERN1531474.789965.2661triticum_urartuTuG1812G0500002289.01.T0171.262.1333
AMTR_s00036p00080390amborella_trichopodaERN1531475.910466.9468eucalyptus_grandisKCW6976274.450565.6593
AMTR_s00036p00080390amborella_trichopodaERN1531470.02857.9832cynara_cardunculusKVI0590767.567655.9459
AMTR_s00036p00080390amborella_trichopodaERN1531470.588262.7451trifolium_pratenseTp57577_TGAC_v2_mRNA1996887.804978.0488
AMTR_s00036p00080390amborella_trichopodaERN1531475.910466.1064gossypium_raimondiiKJB7024176.553766.6667
AMTR_s00036p00080390amborella_trichopodaERN1531477.310964.7059arabidopsis_lyratascaffold_301601.176.880264.3454
AMTR_s00036p00080390amborella_trichopodaERN1531474.509864.7059hordeum_vulgareHORVU.MOREX.r3.5HG0475780.171.891962.4324
AMTR_s00036p00080390amborella_trichopodaERN1531471.428661.9048oryza_barthiiOBART09G07520.263.275454.8387
AMTR_s00036p00080390amborella_trichopodaERN1531478.711568.9076musa_acuminataMa03_p27080.369.041860.4423
AMTR_s00036p00080390amborella_trichopodaERN1531477.030864.7059arabidopsis_hallerig06882.t176.388964.1667
AMTR_s00036p00080390amborella_trichopodaERN1531475.0766.6667eragrostis_tefEt_2A_016441.CDS59.423552.7716
AMTR_s00036p00080390amborella_trichopodaERN1531475.0766.6667eragrostis_tefEt_2B_020532.CDS50.470844.8211
AMTR_s00036p00080390amborella_trichopodaERN1531475.630266.6667corymbia_citriodoracds-KAF8025711.177.363968.1948
AMTR_s00036p00080390amborella_trichopodaERN1531474.229764.7059rosa_chinensisPRQ5135676.589666.763
AMTR_s00036p00080390amborella_trichopodaERN1531475.910468.0672juglans_regiacds.Jr07_28160_p177.650469.6275
AMTR_s00036p00080390amborella_trichopodaERN1531469.187760.5042saccharum_spontaneumSspon.02G0015920-3D-mRNA-161.138653.4653
AMTR_s00036p00080390amborella_trichopodaERN1531475.350165.2661saccharum_spontaneumSspon.02G0015920-1A-mRNA-1:cds72.702762.973
AMTR_s00036p00080390amborella_trichopodaERN1531444.817939.2157saccharum_spontaneumSspon.02G0015920-2B-mRNA-174.418665.1163
AMTR_s00036p00080390amborella_trichopodaERN1531474.789965.2661triticum_dicoccoidesTRIDC5BG032690.172.950863.6612
AMTR_s00036p00080390amborella_trichopodaERN1531474.509864.986triticum_dicoccoidesTRIDC5AG031120.172.876763.5616
AMTR_s00036p00080390amborella_trichopodaERN1531477.871165.2661brassica_oleraceaBo3g065740.177.653665.0838
AMTR_s00036p00080390amborella_trichopodaERN1531471.428661.9048oryza_indicaBGIOSGA030602-PA69.86360.5479
AMTR_s00036p00080390amborella_trichopodaERN1531431.652729.1317dioscorea_rotundataDRNTG_16668.194.95887.395
AMTR_s00036p00080390amborella_trichopodaERN1531445.378240.3361dioscorea_rotundataDRNTG_05491.172.645764.574
AMTR_s00036p00080390amborella_trichopodaERN1531474.509866.1064leersia_perrieriLPERR09G05100.171.505463.4409
AMTR_s00036p00080390amborella_trichopodaERN1531475.630264.1457olea_europaeaOE9A031614C175.842764.3258
AMTR_s00036p00080390amborella_trichopodaERN1531475.910465.2661actinidia_chinensisPSS0734377.20866.3818
AMTR_s00036p00080390amborella_trichopodaERN1531474.229765.5462prunus_aviumPav_sc0000689.1_g120.1.mk:mrna72.404463.9344
AMTR_s00036p00080390amborella_trichopodaERN1531476.750768.9076quercus_subercds-POE72618.178.5170.4871
AMTR_s00036p00080390amborella_trichopodaERN1531476.750767.507citrus_clementinaESR3979378.285768.8571
AMTR_s00036p00080390amborella_trichopodaERN1531478.711565.8263brassica_rapa_ro18A03p040620.1_BraROA.178.711565.8263
AMTR_s00036p00080390amborella_trichopodaERN1531473.109265.2661daucus_carotaKZM9290681.308472.5857
AMTR_s00036p00080390amborella_trichopodaERN1531472.54963.5854nymphaea_colorataNC2G0053660.1:cds79.204969.419
AMTR_s00036p00080390amborella_trichopodaERN1531477.59168.0672coffea_canephoraCDO9790577.59168.0672
AMTR_s00036p00080390amborella_trichopodaERN1531465.266156.0224aegilops_tauschiiAET5Gv20474400.560.051551.5464
AMTR_s00036p00080390amborella_trichopodaERN1531476.750766.3866pistacia_veracds-EVM0016343.178.285767.7143
AMTR_s00036p00080390amborella_trichopodaERN1531475.910465.5462digitaria_exilisDexi2B01G0014950.1:cds70.572960.9375
AMTR_s00036p00080390amborella_trichopodaERN1531475.0764.7059digitaria_exilisDexi2A01G0015960.1:cds71.657861.7647
AMTR_s00036p00080390amborella_trichopodaERN1531476.750765.8263oryza_sativaOs09t0363800-0061.297552.5727
AMTR_s00036p00080390amborella_trichopodaERN1531473.669563.5854panicum_halliiPUZ7047470.698961.0215
AMTR_s00036p00080390amborella_trichopodaERN1531473.949666.3866quercus_lobataQL05p012040:mrna70.212863.0319
AMTR_s00036p00080390amborella_trichopodaERN1531475.0766.9468eragrostis_curvulaTVU0931472.04364.2473
AMTR_s00036p00080390amborella_trichopodaERN1531477.030864.4258camelina_sativaCsa15g018020.176.388963.8889
AMTR_s00036p00080390amborella_trichopodaERN1531476.470664.4258camelina_sativaCsa01g016190.175.833363.8889
AMTR_s00036p00080390amborella_trichopodaERN1531476.750764.1457camelina_sativaCsa19g019310.170.076758.5678
AMTR_s00036p00080390amborella_trichopodaERN1531464.705952.6611selaginella_moellendorffiiEFJ2756181.625466.4311
AMTR_s00036p00080390amborella_trichopodaERN1531464.425852.6611selaginella_moellendorffiiEFJ3738581.272166.4311
AMTR_s00036p00080390amborella_trichopodaERN1531476.750766.9468vitis_viniferaVitvi09g00192_P00178.285768.2857
AMTR_s00036p00080390amborella_trichopodaERN1531477.310964.7059eutrema_salsugineumESQ4861877.310964.7059
AMTR_s00036p00080390amborella_trichopodaERN1531476.190566.1064echinochloa_crusgalliscaffold141.103.cds66.341557.561
AMTR_s00036p00080390amborella_trichopodaERN1531475.630266.3866echinochloa_crusgalliscaffold98.304.cds65.853757.8049
AMTR_s00036p00080390amborella_trichopodaERN1531471.988861.3445echinochloa_crusgalliscaffold197.119.cds71.388960.8333
AMTR_s00036p00080390amborella_trichopodaERN1531472.54963.8655corchorus_capsularisOMP1163675.072566.087
AMTR_s00036p00080390amborella_trichopodaERN1531475.0764.986fraxinus_excelsiorFRAEX38873_v2_000131080.2.cds75.920765.7224
AMTR_s00036p00080390amborella_trichopodaERN1531475.630267.507citrullus_lanatusCla97C07G140600.177.586269.2529
AMTR_s00036p00080390amborella_trichopodaERN1531461.624651.2605oryza_nivaraONIVA09G06540.145.548737.8882

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression