Description

Ensembl ID AMTR_s00030p00067450 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 891 bases Strand Plus strand
Position AmTr_v1.0_scaffold00030 : 700154 - 701044 RNA binding domain Isy1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN16017 Isy1 PF06246 2.7e-93 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN16017 891 296aa ERN16017

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00030p00067450amborella_trichopodaERN0487197.635196.6216amborella_trichopodaERN1601797.635196.6216

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00030p00067450amborella_trichopodaERN1601787.578.7162papaver_somniferumRZC4902978.484870.6061
AMTR_s00030p00067450amborella_trichopodaERN1601785.47372.6351marchantia_polymorphaPTQ4320886.348173.3788
AMTR_s00030p00067450amborella_trichopodaERN1601789.52776.6892cannabis_sativa_femalecds.novel_model_4850_5bd9a17a88.039975.4153
AMTR_s00030p00067450amborella_trichopodaERN1601788.851379.3919beta_vulgarisKMT0457488.25578.8591
AMTR_s00030p00067450amborella_trichopodaERN1601788.513577.7027theobroma_cacaoEOX9240287.043276.412
AMTR_s00030p00067450amborella_trichopodaERN1601772.635158.7838chlamydomonas_reinhardtiiPNW7721677.898663.0435
AMTR_s00030p00067450amborella_trichopodaERN1601790.202777.7027cucumis_meloMELO3C023475.2.188.118875.9076
AMTR_s00030p00067450amborella_trichopodaERN1601787.573.9865arabidopsis_thalianaAT3G18790.186.333373
AMTR_s00030p00067450amborella_trichopodaERN1601790.202778.0405populus_trichocarpaPotri.017G060200.1.v4.188.118876.2376
AMTR_s00030p00067450amborella_trichopodaERN1601790.202777.3649cucumis_sativusKGN4521188.118875.5776
AMTR_s00030p00067450amborella_trichopodaERN1601786.486571.9595brassica_junceacds.BjuB01g12520S85.90671.4765
AMTR_s00030p00067450amborella_trichopodaERN1601786.486572.973brassica_junceacds.BjuA05g26490S86.195372.7273
AMTR_s00030p00067450amborella_trichopodaERN1601786.148773.3108brassica_junceacds.BjuB07g43210S85.858673.064
AMTR_s00030p00067450amborella_trichopodaERN1601756.756845.6081brassica_junceacds.BjuA01g10000S75.336360.5381
AMTR_s00030p00067450amborella_trichopodaERN1601769.932459.7973brassica_napusCDX9227477.528166.2921
AMTR_s00030p00067450amborella_trichopodaERN1601770.945959.7973brassica_napusCDX9931478.651766.2921
AMTR_s00030p00067450amborella_trichopodaERN1601739.52732.4324brassica_napusCDY1854679.591865.3061
AMTR_s00030p00067450amborella_trichopodaERN1601789.52778.0405prunus_persicaONH9504488.039976.7442
AMTR_s00030p00067450amborella_trichopodaERN1601770.945962.8378prunus_persicaONI0445388.235378.1513
AMTR_s00030p00067450amborella_trichopodaERN1601779.729769.9324cajanus_cajanC.cajan_35778.t89.733878.7072
AMTR_s00030p00067450amborella_trichopodaERN1601779.054169.2568cajanus_cajanC.cajan_14659.t89.31378.2443
AMTR_s00030p00067450amborella_trichopodaERN1601788.513577.3649malus_domestica_goldenCDS:MD12G0180700.187.043276.0797
AMTR_s00030p00067450amborella_trichopodaERN1601786.824375.3378glycine_maxKRH1527385.953274.5819
AMTR_s00030p00067450amborella_trichopodaERN1601786.824375.3378glycine_maxKRH3815185.953274.5819
AMTR_s00030p00067450amborella_trichopodaERN1601788.175776.6892glycine_maxKRH5515986.71175.4153
AMTR_s00030p00067450amborella_trichopodaERN1601738.851431.4189prunus_dulcisVVA1265787.121270.4545
AMTR_s00030p00067450amborella_trichopodaERN1601788.513575medicago_truncatulaAET0075086.468673.2673
AMTR_s00030p00067450amborella_trichopodaERN1601788.851378.3784lupinus_angustifoliusOIW0823286.229576.0656
AMTR_s00030p00067450amborella_trichopodaERN1601787.837876.3513lupinus_angustifoliusOIV9912986.092774.8344
AMTR_s00030p00067450amborella_trichopodaERN1601783.108168.5811physcomitrium_patensPp3c13_15060V3.184.246669.5205
AMTR_s00030p00067450amborella_trichopodaERN1601788.175778.3784phaseolus_vulgarisESW1386786.71177.0764
AMTR_s00030p00067450amborella_trichopodaERN1601782.432472.973phaseolus_vulgarisESW1853685.915576.0563
AMTR_s00030p00067450amborella_trichopodaERN1601786.824374.3243pisum_sativumPsat2g008160.1.cds184.818572.6073
AMTR_s00030p00067450amborella_trichopodaERN1601750.337840.2027vigna_angularisKOM4527464.224151.2931
AMTR_s00030p00067450amborella_trichopodaERN1601748.986540.5405vigna_angularisKOM4527383.333368.9655
AMTR_s00030p00067450amborella_trichopodaERN1601773.310863.5135vigna_angularisKOM4527682.509571.4829
AMTR_s00030p00067450amborella_trichopodaERN1601757.770348.9865vigna_angularisKOM4700979.166767.1296
AMTR_s00030p00067450amborella_trichopodaERN1601788.175779.3919vigna_unguiculataVigun08g148400.1.v1.2.CDS.187.29178.5953
AMTR_s00030p00067450amborella_trichopodaERN1601789.52778.7162manihot_esculentaOAY5975287.748377.1523
AMTR_s00030p00067450amborella_trichopodaERN1601788.513577.7027solanum_lycopersicumSolyc05g051070.3.184.516174.1936
AMTR_s00030p00067450amborella_trichopodaERN1601751.689241.2162capsicum_annuumPHT6746363.7550.8333
AMTR_s00030p00067450amborella_trichopodaERN1601789.189278.3784capsicum_annuumPHT8182788.294377.592
AMTR_s00030p00067450amborella_trichopodaERN1601748.310845.2703vigna_radiataVradi06g05290.187.195181.7073
AMTR_s00030p00067450amborella_trichopodaERN1601771.959561.8243sesamum_indicumSIN_1025355.t85.273.2
AMTR_s00030p00067450amborella_trichopodaERN1601788.513579.7297lactuca_sativacds-PLY83467.187.043278.4053
AMTR_s00030p00067450amborella_trichopodaERN1601788.851379.7297helianthus_annuusCDS:HanXRQr2_Chr03g0135951.187.959978.9298
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.9459avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0001175.268.258458.9888
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.9459avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0001487.168.067258.8235
AMTR_s00030p00067450amborella_trichopodaERN1601778.378466.8919lolium_perennecds.KYUSt_chr6.1894677.076465.7807
AMTR_s00030p00067450amborella_trichopodaERN1601750.337843.2432oryza_longistaminataKN539183.1_FGP01373.39963.0542
AMTR_s00030p00067450amborella_trichopodaERN1601781.756870.9459avena_sativa_sangAVESA.00010b.r2.6CG1077810.1.CDS.177.813567.5241
AMTR_s00030p00067450amborella_trichopodaERN1601781.756870.9459avena_sativa_sangAVESA.00010b.r2.6DG1163550.1.CDS.177.813567.5241
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.9459avena_sativa_sangAVESA.00010b.r2.6AG1036790.1.CDS.178.13567.5241
AMTR_s00030p00067450amborella_trichopodaERN1601788.851378.0405solanum_tuberosumPGSC0003DMT40001797887.959977.2575
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_rufipogonORUFI02G24550.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601782.432470.2703oryza_brachyanthaOB02G30580.178.456666.881
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_glaberrimaORGLA02G0199300.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_punctataOPUNC02G21090.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601782.094669.2568setaria_italicaKQL3036278.13565.9164
AMTR_s00030p00067450amborella_trichopodaERN1601782.094669.2568setaria_viridisTKW4013678.13565.9164
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324sorghum_bicolorEES0710978.317266.9903
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324triticum_turgidumTRITD6Bv1G127630.177.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.5946triticum_turgidumTRITD6Av1G134040.177.813566.2379
AMTR_s00030p00067450amborella_trichopodaERN1601770.608157.7703triticum_turgidumTRITD3Bv1G280910.173.851660.424
AMTR_s00030p00067450amborella_trichopodaERN1601769.256858.7838secale_cerealeSECCE6Rv1G0439160.1.CDS.177.358565.6604
AMTR_s00030p00067450amborella_trichopodaERN1601781.418969.5946secale_cerealeSECCE6Rv1G0396940.1.CDS.177.49266.2379
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324triticum_aestivumTraesCS6B02G244300.1.cds177.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601758.108148.6486triticum_aestivumTraesCS3A02G532300.1.cds177.828165.1584
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324triticum_aestivumTraesCS6D02G197000.1.cds177.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601769.594657.7703triticum_aestivumTraesCS3B02G609900.1.cds172.280760
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.2568triticum_aestivumTraesCS6A02G214300.1.cds177.813565.9164
AMTR_s00030p00067450amborella_trichopodaERN1601739.52728.7162zea_maysZm00001eb424510_P00133.620724.4253
AMTR_s00030p00067450amborella_trichopodaERN1601782.094669.9324zea_maysZm00001eb246450_P00178.13566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601742.567631.4189zea_maysZm00001eb267310_P00146.840134.5725
AMTR_s00030p00067450amborella_trichopodaERN1601766.216257.7703ananas_comosusAco031342.1.mrna1.cds180.327970.082
AMTR_s00030p00067450amborella_trichopodaERN1601755.405447.2973ananas_comosusAco000163.1.mrna180.788268.9655
AMTR_s00030p00067450amborella_trichopodaERN1601786.486574.3243ananas_comosusAco022429.1.mrna1.cds182.315170.7395
AMTR_s00030p00067450amborella_trichopodaERN1601757.432439.527caenorhabditis_elegansF53B7.3.163.670443.8202
AMTR_s00030p00067450amborella_trichopodaERN1601756.756845.6081drosophila_melanogasterFBpp008130561.764749.6324
AMTR_s00030p00067450amborella_trichopodaERN1601763.851448.6486homo_sapiensENSP0000037697366.315850.5263
AMTR_s00030p00067450amborella_trichopodaERN1601739.864922.6351saccharomyces_cerevisiaeYJR050W50.212828.5106
AMTR_s00030p00067450amborella_trichopodaERN1601781.081172.2973chenopodium_quinoaAUR62014898-RA:cds90.56680.7547
AMTR_s00030p00067450amborella_trichopodaERN1601780.067666.5541chara_brauniiGBG4403573.602561.1801
AMTR_s00030p00067450amborella_trichopodaERN1601773.310865.2027corylus_avellanaCav03g09650.t1.cds175.347267.0139
AMTR_s00030p00067450amborella_trichopodaERN1601778.716267.2297brachypodium_distachyonPNT6898978.451267.0034
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_glumipatulaOGLUM02G23500.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601790.540580.4054ipomoea_trilobaitb05g22000.t190.540580.4054
AMTR_s00030p00067450amborella_trichopodaERN1601789.864977.3649kalanchoe_fedtschenkoiKaladp0040s0520.1.v1.1.CDS.188.963276.5886
AMTR_s00030p00067450amborella_trichopodaERN1601760.47341.8919galdieria_sulphurariaEME3167967.041246.4419
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.5946triticum_urartuTuG1812G0600002107.01.T01.cds29097277.813566.2379
AMTR_s00030p00067450amborella_trichopodaERN1601789.52776.0135eucalyptus_grandisKCW7860188.333375
AMTR_s00030p00067450amborella_trichopodaERN1601790.540581.4189cynara_cardunculusKVH8835089.333380.3333
AMTR_s00030p00067450amborella_trichopodaERN1601787.574.3243trifolium_pratenseTp57577_TGAC_v2_mRNA890485.478572.6073
AMTR_s00030p00067450amborella_trichopodaERN1601744.594636.1486gossypium_raimondiiKJB2006776.300661.8497
AMTR_s00030p00067450amborella_trichopodaERN1601787.837877.3649gossypium_raimondiiKJB1838886.956576.5886
AMTR_s00030p00067450amborella_trichopodaERN1601787.837873.6487arabidopsis_lyratafgenesh2_kg.3__2091__AT3G18790.186.666772.6667
AMTR_s00030p00067450amborella_trichopodaERN1601778.716266.8919hordeum_vulgareHORVU.MOREX.r3.6HG0550340.1.CDS177.152365.5629
AMTR_s00030p00067450amborella_trichopodaERN1601778.716266.5541hordeum_vulgareHORVU.MOREX.r3.6HG0550330.1.CDS177.152365.2318
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324hordeum_vulgareHORVU.MOREX.r3.6HG0592240.1.CDS177.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601779.729767.2297hordeum_vulgareHORVU.MOREX.r3.6HG0546070.1.CDS175.64163.7821
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_barthiiOBART02G23140.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601786.486575musa_acuminataMa09_p15600.183.387672.3127
AMTR_s00030p00067450amborella_trichopodaERN1601787.837873.9865arabidopsis_hallerig21633.t1.cds186.666773
AMTR_s00030p00067450amborella_trichopodaERN1601780.067669.2568eragrostis_tefEt_1B_014442.CDS76.451666.129
AMTR_s00030p00067450amborella_trichopodaERN1601780.067668.9189eragrostis_tefEt_1A_009614.CDS72.036562.0061
AMTR_s00030p00067450amborella_trichopodaERN1601789.52777.027corymbia_citriodoracds-KAF8033641.188.333376
AMTR_s00030p00067450amborella_trichopodaERN1601788.175775.6757rosa_chinensisPRQ3823286.423874.1722
AMTR_s00030p00067450amborella_trichopodaERN1601787.578.3784juglans_regiacds.Jr02_11260_p185.478576.5677
AMTR_s00030p00067450amborella_trichopodaERN1601787.578.3784juglans_regiacds.Jr02_11270_p185.478576.5677
AMTR_s00030p00067450amborella_trichopodaERN1601787.578.3784juglans_regiacds.Jr02_11280_p185.478576.5677
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324triticum_dicoccoidesTRIDC6BG039550.177.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601769.932457.0946triticum_dicoccoidesTRIDC3BG086850.173.144959.7173
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.5946triticum_dicoccoidesTRIDC6AG033220.177.813566.2379
AMTR_s00030p00067450amborella_trichopodaERN1601786.486572.973brassica_oleraceaBo5g117030.186.486572.973
AMTR_s00030p00067450amborella_trichopodaERN1601748.648641.2162brassica_oleraceaBo1g116180.175.392763.8743
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_indicaBGIOSGA006098-PA78.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601762.162243.5811ciona_savignyiENSCSAVP0000001532660.927242.7152
AMTR_s00030p00067450amborella_trichopodaERN1601784.459571.6216dioscorea_rotundataDRNTG_02183.187.10873.8676
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703leersia_perrieriLPERR02G18840.178.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601788.851380.0676olea_europaeaOE9A084542C187.959979.2642
AMTR_s00030p00067450amborella_trichopodaERN1601772.635163.8514olea_europaeaOE9A106840C286.345475.9036
AMTR_s00030p00067450amborella_trichopodaERN1601789.864980.7432actinidia_chinensisPSS2667090.476281.2925
AMTR_s00030p00067450amborella_trichopodaERN1601740.878435.1351prunus_aviumPav_sc0000671.1_g280.1.mk:mrna88.321275.9124
AMTR_s00030p00067450amborella_trichopodaERN1601750.337843.9189prunus_aviumPav_sc0001461.1_g180.1.mk:mrna86.627975.5814
AMTR_s00030p00067450amborella_trichopodaERN160175043.5811prunus_aviumPav_sc0001398.1_g010.1.mk:mrna86.046575
AMTR_s00030p00067450amborella_trichopodaERN1601723.986522.6351prunus_aviumPav_sc0000412.1_g140.1.mk:mrna85.542280.7229
AMTR_s00030p00067450amborella_trichopodaERN1601788.851377.7027quercus_subercds-POE44591.178.041568.2493
AMTR_s00030p00067450amborella_trichopodaERN1601788.851377.7027quercus_subercds-POF20805.152.286345.7256
AMTR_s00030p00067450amborella_trichopodaERN1601790.540578.7162nicotiana_attenuataOIT0313489.932978.1879
AMTR_s00030p00067450amborella_trichopodaERN1601787.837874.3243citrus_clementinaESR6033186.378773.0897
AMTR_s00030p00067450amborella_trichopodaERN1601786.824376.0135daucus_carotaKZN0272486.824376.0135
AMTR_s00030p00067450amborella_trichopodaERN1601786.824376.0135daucus_carotaKZN0920686.824376.0135
AMTR_s00030p00067450amborella_trichopodaERN1601791.554183.1081nymphaea_colorataNC9G0146960.1:cds91.554183.1081
AMTR_s00030p00067450amborella_trichopodaERN1601761.486542.2297ostreococcus_lucimarinusABO9557567.158746.1255
AMTR_s00030p00067450amborella_trichopodaERN1601787.837877.7027coffea_canephoraCDP1278786.666776.6667
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324aegilops_tauschiiAET6Gv20566300.477.813566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601789.52775.3378pistacia_veracds-EVM0013039.188.628874.5819
AMTR_s00030p00067450amborella_trichopodaERN1601789.52775.3378pistacia_veracds-EVM0011540.188.628874.5819
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_sativaOs02t0602500-0278.13566.881
AMTR_s00030p00067450amborella_trichopodaERN1601782.432470.6081panicum_halliiPUZ7642178.456667.2026
AMTR_s00030p00067450amborella_trichopodaERN1601788.851378.0405quercus_lobataQL09p054497:mrna68.489660.1562
AMTR_s00030p00067450amborella_trichopodaERN1601788.513576.6892quercus_lobataQL12p002363:mrna:CDS:386.468674.9175
AMTR_s00030p00067450amborella_trichopodaERN1601781.081169.5946eragrostis_curvulaTVU2936672.072161.8619
AMTR_s00030p00067450amborella_trichopodaERN1601780.743268.9189eragrostis_curvulaTVU0350676.848965.5949
AMTR_s00030p00067450amborella_trichopodaERN1601788.513574.6622camelina_sativaCsa15g026430.1.cds187.333373.6667
AMTR_s00030p00067450amborella_trichopodaERN1601788.175773.9865camelina_sativaCsa19g026210.1.cds18773
AMTR_s00030p00067450amborella_trichopodaERN1601788.175774.3243camelina_sativaCsa01g021700.156.616147.7223
AMTR_s00030p00067450amborella_trichopodaERN1601772.297356.4189selaginella_moellendorffiiEFJ2651881.368863.4981
AMTR_s00030p00067450amborella_trichopodaERN1601780.743262.8378selaginella_moellendorffiiEFJ1477379.666762
AMTR_s00030p00067450amborella_trichopodaERN1601791.216281.7568vitis_viniferaVitvi04g01610_P00190.60481.2081
AMTR_s00030p00067450amborella_trichopodaERN1601786.486573.3108eutrema_salsugineumESQ4801685.90672.8188
AMTR_s00030p00067450amborella_trichopodaERN1601782.094669.9324echinochloa_crusgalliscaffold139.163.cds78.13566.5595
AMTR_s00030p00067450amborella_trichopodaERN1601781.756869.9324echinochloa_crusgalliscaffold17.345.cds77.564166.3462
AMTR_s00030p00067450amborella_trichopodaERN1601782.094669.5946echinochloa_crusgalliscaffold123.19.cds61.832152.4173
AMTR_s00030p00067450amborella_trichopodaERN1601768.918959.4595corchorus_capsularisOMO8673882.926871.5447
AMTR_s00030p00067450amborella_trichopodaERN1601788.513577.027corchorus_capsularisOMO5586087.043275.7475
AMTR_s00030p00067450amborella_trichopodaERN1601788.175779.3919fraxinus_excelsiorFRAEX38873_v2_000318890.2.cds87.583978.8591
AMTR_s00030p00067450amborella_trichopodaERN1601721.621620.6081fraxinus_excelsiorFRAEX38873_v2_000327990.1.cds186.486582.4324
AMTR_s00030p00067450amborella_trichopodaERN1601789.52780.7432fraxinus_excelsiorFRAEX38873_v2_000233000.2.cds88.628879.9331
AMTR_s00030p00067450amborella_trichopodaERN1601789.864977.027citrullus_lanatusCla97C09G178380.187.788875.2475
AMTR_s00030p00067450amborella_trichopodaERN1601790.202777.7027citrullus_lanatusCla97C01G004800.188.118875.9076
AMTR_s00030p00067450amborella_trichopodaERN1601782.094670.2703oryza_nivaraONIVA02G26050.178.13566.881

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression