Description

Ensembl ID AMTR_s00026p00105800 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 342 bases Strand Plus strand
Position AmTr_v1.0_scaffold00026 : 1308891 - 1309232 RNA binding domain Ribosomal_L12
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN10367 Ribosomal_L12 PF00542 9.6e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN10367 342 113aa ERN10367

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00026p00105800amborella_trichopodaERN1983250.292448.538amborella_trichopodaERN1036776.106273.4513
AMTR_s00026p00105800amborella_trichopodaERM9436246.976744.6512amborella_trichopodaERN1036789.380584.9557
AMTR_s00026p00105800amborella_trichopodaERN0124638.709727.1889amborella_trichopodaERN1036774.336352.2124
AMTR_s00026p00105800amborella_trichopodaERN1863243.292729.878amborella_trichopodaERN1036762.831943.3628
AMTR_s00026p00105800amborella_trichopodaERN1957338.202224.7191amborella_trichopodaERN1036760.17738.9381
AMTR_s00026p00105800amborella_trichopodaERM9727836.548224.8731amborella_trichopodaERN1036763.716843.3628

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00026p00105800amborella_trichopodaERN1036779.64661.9469papaver_somniferumRZC8325442.857133.3333
AMTR_s00026p00105800amborella_trichopodaERN1036780.53163.7168papaver_somniferumRZC7920949.726839.3443
AMTR_s00026p00105800amborella_trichopodaERN1036772.566456.6372marchantia_polymorphaPTQ3625935.807927.9476
AMTR_s00026p00105800amborella_trichopodaERN1036781.415963.7168cannabis_sativa_femalecds.evm.model.03.148142.990733.6449
AMTR_s00026p00105800amborella_trichopodaERN1036781.415964.6018ficus_caricaFCD_00034606-RA:cds50.273239.8907
AMTR_s00026p00105800amborella_trichopodaERN1036781.415964.6018ficus_caricaFCD_00021838-RA:cds33.333326.4493
AMTR_s00026p00105800amborella_trichopodaERN1036775.221261.0619beta_vulgarisKMS9773439.170531.7972
AMTR_s00026p00105800amborella_trichopodaERN1036781.415967.2566theobroma_cacaoEOX9687239.316232.4786
AMTR_s00026p00105800amborella_trichopodaERN1036777.876162.8319cucumis_meloMELO3C002405.2.141.121533.1776
AMTR_s00026p00105800amborella_trichopodaERN1036773.451354.8673arabidopsis_thalianaAT1G70190.139.903829.8077
AMTR_s00026p00105800amborella_trichopodaERN1036752.212438.9381arabidopsis_thalianaAT2G03130.153.636440
AMTR_s00026p00105800amborella_trichopodaERN1036780.53163.7168populus_trichocarpaPotri.003G074800.1.v4.142.129633.3333
AMTR_s00026p00105800amborella_trichopodaERN1036777.876163.7168cucumis_sativusKGN6446441.121533.6449
AMTR_s00026p00105800amborella_trichopodaERN1036769.911554.8673brassica_junceacds.BjuA07g26450S37.79929.6651
AMTR_s00026p00105800amborella_trichopodaERN1036770.796555.7522brassica_junceacds.BjuB03g25280S37.558729.5775
AMTR_s00026p00105800amborella_trichopodaERN1036770.796555.7522brassica_napusCDX6835437.558729.5775
AMTR_s00026p00105800amborella_trichopodaERN1036769.911554.8673brassica_napusCDY2351437.79929.6651
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867prunus_persicaONI1159742.990734.5794
AMTR_s00026p00105800amborella_trichopodaERN1036782.300967.2566cajanus_cajanC.cajan_32015.t.cds142.857135.023
AMTR_s00026p00105800amborella_trichopodaERN1036776.991160.177malus_domestica_goldenCDS:MD05G0209000.179.090961.8182
AMTR_s00026p00105800amborella_trichopodaERN1036778.761164.6018malus_domestica_goldenCDS:MD10G0193900.141.588834.1121
AMTR_s00026p00105800amborella_trichopodaERN1036781.415966.3717glycine_maxKRH4368242.592634.7222
AMTR_s00026p00105800amborella_trichopodaERN1036782.300968.1416glycine_maxKRH1377342.857135.4839
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867prunus_dulcisVVA2728142.990734.5794
AMTR_s00026p00105800amborella_trichopodaERN1036779.64663.7168medicago_truncatulaKEH3822641.666733.3333
AMTR_s00026p00105800amborella_trichopodaERN1036777.876163.7168medicago_truncatulaKEH2256140.55333.1797
AMTR_s00026p00105800amborella_trichopodaERN1036780.53167.2566lupinus_angustifoliusOIW1169842.325635.3488
AMTR_s00026p00105800amborella_trichopodaERN1036779.64666.3717lupinus_angustifoliusOIW0534441.666734.7222
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867phaseolus_vulgarisESW2148542.790734.4186
AMTR_s00026p00105800amborella_trichopodaERN1036780.53164.6018phaseolus_vulgarisESW1750344.390235.6098
AMTR_s00026p00105800amborella_trichopodaERN1036776.991162.8319pisum_sativumPsat1g015120.1.cds140.277832.8704
AMTR_s00026p00105800amborella_trichopodaERN1036778.761165.4867pisum_sativumPsat3g150240.1.cds141.013834.1014
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867vigna_angularisKOM4354642.790734.4186
AMTR_s00026p00105800amborella_trichopodaERN1036782.300967.2566vigna_unguiculataVigun05g189700.1.v1.2.CDS.143.255835.3488
AMTR_s00026p00105800amborella_trichopodaERN1036781.415966.3717vigna_unguiculataVigun01g011800.2.v1.2.CDS.142.790734.8837
AMTR_s00026p00105800amborella_trichopodaERN1036782.300964.6018manihot_esculentaOAY5443043.055633.7963
AMTR_s00026p00105800amborella_trichopodaERN1036779.64667.2566solanum_lycopersicumSolyc02g031970.1.1.141.860535.3488
AMTR_s00026p00105800amborella_trichopodaERN1036776.991161.9469solanum_lycopersicumSolyc11g071530.1.1.142.43934.1463
AMTR_s00026p00105800amborella_trichopodaERN1036777.876165.4867capsicum_annuumPHT6896353.01244.5783
AMTR_s00026p00105800amborella_trichopodaERN1036778.761167.2566capsicum_annuumPHT7771041.203735.1852
AMTR_s00026p00105800amborella_trichopodaERN1036781.415966.3717vigna_radiataVradi05g23440.142.790734.8837
AMTR_s00026p00105800amborella_trichopodaERN1036781.415958.4071sesamum_indicumSIN_1006810.t.cds142.790730.6977
AMTR_s00026p00105800amborella_trichopodaERN1036777.876164.6018lactuca_sativacds-PLY61722.140.740733.7963
AMTR_s00026p00105800amborella_trichopodaERN1036777.876164.6018lactuca_sativacds-PLY80774.15545.625
AMTR_s00026p00105800amborella_trichopodaERN1036779.64664.6018helianthus_annuusCDS:HanXRQr2_Chr12g0523041.142.452834.434
AMTR_s00026p00105800amborella_trichopodaERN1036749.557531.8584lolium_perennecds.KYUSt_chr1.3920832.941221.1765
AMTR_s00026p00105800amborella_trichopodaERN1036768.141649.5575avena_sativa_sangAVESA.00010b.r2.1DG0156590.1.CDS.139.487228.7179
AMTR_s00026p00105800amborella_trichopodaERN1036768.141649.5575avena_sativa_sangAVESA.00010b.r2.1AG0005840.1.CDS.139.487228.7179
AMTR_s00026p00105800amborella_trichopodaERN1036768.141649.5575avena_sativa_sangAVESA.00010b.r2.1AG0037360.1.CDS.134.684725.2252
AMTR_s00026p00105800amborella_trichopodaERN1036778.761161.9469solanum_tuberosumPGSC0003DMT40004818643.414634.1463
AMTR_s00026p00105800amborella_trichopodaERN1036778.761168.1416solanum_tuberosumPGSC0003DMT40003864641.395335.814
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_rufipogonORUFI05G26910.139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036769.911551.3274oryza_brachyanthaOB05G32680.119.651714.4279
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_glaberrimaORGLA05G0216600.139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036769.911549.5575oryza_punctataOPUNC05G22690.140.101528.4264
AMTR_s00026p00105800amborella_trichopodaERN1036769.911553.0973setaria_italicaKQL1442740.721630.9278
AMTR_s00026p00105800amborella_trichopodaERN1036769.911553.0973setaria_viridisTKW2599432.37724.5902
AMTR_s00026p00105800amborella_trichopodaERN1036769.026649.5575triticum_turgidumTRITD1Bv1G205990.139.795928.5714
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425secale_cerealeSECCE1Rv1G0054550.1.CDS.140.414529.5337
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425triticum_aestivumTraesCS1B02G403600.1.cds131.836723.2653
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425triticum_aestivumTraesCS1A02G381100.1.cds139.795929.0816
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425triticum_aestivumTraesCS1D02G388900.1.cds139.795929.0816
AMTR_s00026p00105800amborella_trichopodaERN1036769.911550.4425zea_maysZm00001eb343100_P00140.932629.5337
AMTR_s00026p00105800amborella_trichopodaERN1036769.026649.5575zea_maysZm00001eb295090_P00139.795928.5714
AMTR_s00026p00105800amborella_trichopodaERN1036776.991157.5221chenopodium_quinoaAUR62001367-RA:cds39.908329.8165
AMTR_s00026p00105800amborella_trichopodaERN1036776.991159.292chenopodium_quinoaAUR62025583-RA:cds39.908330.7339
AMTR_s00026p00105800amborella_trichopodaERN1036767.256651.3274chara_brauniiGBG6832738.578729.4416
AMTR_s00026p00105800amborella_trichopodaERN1036751.327439.823arabis_alpinaKFK4143978.378460.8108
AMTR_s00026p00105800amborella_trichopodaERN1036771.681451.3274arabis_alpinaKFK4143839.512228.2927
AMTR_s00026p00105800amborella_trichopodaERN1036783.185863.7168corylus_avellanaCav02g26380.t1.cds144.976134.4498
AMTR_s00026p00105800amborella_trichopodaERN1036783.185863.7168corylus_avellanaCav02g26440.t1.cds144.976134.4498
AMTR_s00026p00105800amborella_trichopodaERN1036768.141647.7876brachypodium_distachyonPNT7075538.308526.8657
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_glumipatulaOGLUM05G26720.139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036770.796551.3274oryza_meridionalisOMERI05G22420.140.40429.2929
AMTR_s00026p00105800amborella_trichopodaERN1036777.876160.177ipomoea_trilobaitb10g17280.t240.930231.6279
AMTR_s00026p00105800amborella_trichopodaERN1036780.53164.6018kalanchoe_fedtschenkoiKaladp0068s0216.1.v1.1.CDS.142.325633.9535
AMTR_s00026p00105800amborella_trichopodaERN1036777.876163.7168eucalyptus_grandisKCW7554640.182632.8767
AMTR_s00026p00105800amborella_trichopodaERN1036779.64661.9469cynara_cardunculusKVH9383742.65433.1754
AMTR_s00026p00105800amborella_trichopodaERN1036777.876165.4867trifolium_pratenseTp57577_TGAC_v2_mRNA2939640.740734.2593
AMTR_s00026p00105800amborella_trichopodaERN1036779.64664.6018trifolium_pratenseTp57577_TGAC_v2_mRNA3015341.474733.6406
AMTR_s00026p00105800amborella_trichopodaERN1036782.300967.2566gossypium_raimondiiKJB3291643.457935.514
AMTR_s00026p00105800amborella_trichopodaERN1036746.902735.3982arabidopsis_lyratafgenesh2_kg.5__213__AT2G03130.151.960839.2157
AMTR_s00026p00105800amborella_trichopodaERN1036772.566454.8673arabidopsis_lyratafgenesh2_kg.2__1274__AT1G70190.140.196130.3922
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_barthiiOBART05G25120.139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036771.681452.2124asparagus_officinalisONK8169641.116829.9492
AMTR_s00026p00105800amborella_trichopodaERN1036774.336361.0619musa_acuminataMa09_p20220.140.384633.1731
AMTR_s00026p00105800amborella_trichopodaERN1036773.451355.7522arabidopsis_hallerig03757.t1.cds140.096630.4348
AMTR_s00026p00105800amborella_trichopodaERN1036769.911551.3274eragrostis_tefEt_9B_063902.CDS140.306129.5918
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425eragrostis_tefEt_9A_063389.CDS34.210525
AMTR_s00026p00105800amborella_trichopodaERN1036779.64664.6018corymbia_citriodoracds-KAF8013792.141.474733.6406
AMTR_s00026p00105800amborella_trichopodaERN1036764.601851.3274corymbia_citriodoracds-KAF8013791.182.954565.9091
AMTR_s00026p00105800amborella_trichopodaERN1036777.876161.9469rosa_chinensisPRQ3006841.314632.8638
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867juglans_regiacds.Jr_Scaffold_13_00050_p168.656755.2239
AMTR_s00026p00105800amborella_trichopodaERN1036781.415965.4867juglans_regiacds.Jr11_20670_p144.019135.4067
AMTR_s00026p00105800amborella_trichopodaERN1036782.300965.4867juglans_regiacds.Jr03_09150_p144.497635.4067
AMTR_s00026p00105800amborella_trichopodaERN1036769.026654.8673juglans_regiacds.Jr08_19600_p176.470660.7843
AMTR_s00026p00105800amborella_trichopodaERN1036769.911551.3274saccharum_spontaneumSspon.07G0021950-1B-mRNA-1:cds37.264227.3585
AMTR_s00026p00105800amborella_trichopodaERN1036769.911553.0973saccharum_spontaneumSspon.07G0021910-3D-mRNA-1:cds40.932631.0881
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425triticum_dicoccoidesTRIDC1AG056030.337.681227.5362
AMTR_s00026p00105800amborella_trichopodaERN1036769.911554.8673brassica_oleraceaBo6g094890.137.79929.6651
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_indicaBGIOSGA017600-PA39.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036773.451358.4071dioscorea_rotundataDRNTG_15734.1.cds140.487832.1951
AMTR_s00026p00105800amborella_trichopodaERN1036773.451358.4071dioscorea_rotundataDRNTG_18543.1.cds140.487832.1951
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425leersia_perrieriLPERR05G20900.139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036782.300961.0619olea_europaeaOE9A050179C232.746524.2958
AMTR_s00026p00105800amborella_trichopodaERN1036781.415959.292olea_europaeaOE9A049554C142.790731.1628
AMTR_s00026p00105800amborella_trichopodaERN1036781.415966.3717actinidia_chinensisPSS1109242.790734.8837
AMTR_s00026p00105800amborella_trichopodaERN1036782.300965.4867quercus_subercds-POE57013.144.497635.4067
AMTR_s00026p00105800amborella_trichopodaERN1036782.300964.6018quercus_subercds-POE57012.127.596421.6617
AMTR_s00026p00105800amborella_trichopodaERN1036777.876162.8319nicotiana_attenuataOIT0337640.930233.0233
AMTR_s00026p00105800amborella_trichopodaERN1036776.106256.6372citrus_clementinaESR6189039.269429.2237
AMTR_s00026p00105800amborella_trichopodaERN1036779.64665.4867daucus_carotaKZM8708342.253534.7418
AMTR_s00026p00105800amborella_trichopodaERN1036776.106261.9469daucus_carotaKZM8019279.629664.8148
AMTR_s00026p00105800amborella_trichopodaERN1036779.64665.4867daucus_carotaKZN1168242.253534.7418
AMTR_s00026p00105800amborella_trichopodaERN1036775.221261.9469nymphaea_colorataNC9G0170280.1:cds41.062833.8164
AMTR_s00026p00105800amborella_trichopodaERN1036761.946943.3628ostreococcus_lucimarinusABO9984650.724635.5072
AMTR_s00026p00105800amborella_trichopodaERN1036779.64665.4867coffea_canephoraCDP1127741.860534.4186
AMTR_s00026p00105800amborella_trichopodaERN1036780.53164.6018pistacia_veracds-EVM0024563.142.924534.434
AMTR_s00026p00105800amborella_trichopodaERN1036770.796553.9823digitaria_exilisDexi3B01G0017400.1:cds31.620624.1107
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_sativaOs05t0554100-0139.393928.7879
AMTR_s00026p00105800amborella_trichopodaERN1036769.026651.3274panicum_halliiPUZ6487333.476424.8927
AMTR_s00026p00105800amborella_trichopodaERN1036782.300965.4867quercus_lobataQL11p013638:mrna:CDS:344.497635.4067
AMTR_s00026p00105800amborella_trichopodaERN1036769.911550.4425eragrostis_curvulaTVT9743122.766616.4265
AMTR_s00026p00105800amborella_trichopodaERN1036770.796550.4425eragrostis_curvulaTVT9879823.809516.9643
AMTR_s00026p00105800amborella_trichopodaERN1036746.017738.0531camelina_sativaCsa09g005350.1.cds165.822854.4304
AMTR_s00026p00105800amborella_trichopodaERN1036747.787637.1681camelina_sativaCsa04g008560.1.cds168.354453.1646
AMTR_s00026p00105800amborella_trichopodaERN1036772.566453.9823camelina_sativaCsa07g037020.138.139528.3721
AMTR_s00026p00105800amborella_trichopodaERN1036774.336357.5221camelina_sativaCsa05g089220.1.cds140.776731.5534
AMTR_s00026p00105800amborella_trichopodaERN1036774.336356.6372camelina_sativaCsa16g031810.1.cds140.776731.068
AMTR_s00026p00105800amborella_trichopodaERN1036746.017737.1681camelina_sativaCsa06g003070.1.cds165.822853.1646
AMTR_s00026p00105800amborella_trichopodaERN1036769.026649.5575selaginella_moellendorffiiEFJ1278751.655637.0861
AMTR_s00026p00105800amborella_trichopodaERN1036769.026649.5575selaginella_moellendorffiiEFJ1394751.655637.0861
AMTR_s00026p00105800amborella_trichopodaERN1036778.761166.3717vitis_viniferaVitvi01g00114_P00143.203936.4078
AMTR_s00026p00105800amborella_trichopodaERN1036773.451356.6372eutrema_salsugineumESQ2820138.425929.6296
AMTR_s00026p00105800amborella_trichopodaERN1036768.141649.5575echinochloa_crusgalliscaffold13.1002.cds39.690728.866
AMTR_s00026p00105800amborella_trichopodaERN1036769.911551.3274echinochloa_crusgalliscaffold310.64.cds40.721629.8969
AMTR_s00026p00105800amborella_trichopodaERN1036769.911549.5575echinochloa_crusgalliscaffold77.464.cds40.932629.0155
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425echinochloa_crusgalliscaffold1.352.cds40.206229.3814
AMTR_s00026p00105800amborella_trichopodaERN1036781.415964.6018corchorus_capsularisOMO7495541.62933.0317
AMTR_s00026p00105800amborella_trichopodaERN1036782.300960.177fraxinus_excelsiorFRAEX38873_v2_000088380.3.cds35.361225.8555
AMTR_s00026p00105800amborella_trichopodaERN1036783.185861.0619fraxinus_excelsiorFRAEX38873_v2_000373980.1.cds143.720932.093
AMTR_s00026p00105800amborella_trichopodaERN1036780.53161.9469citrullus_lanatusCla97C03G055380.142.523432.7103
AMTR_s00026p00105800amborella_trichopodaERN1036769.026650.4425oryza_nivaraONIVA05G26320.139.393928.7879

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression